Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7RJE
DownloadVisualize
BU of 7rje by Molmil
Complex III2 from Candida albicans, Inz-5 bound
Descriptor: 3-[2-fluoro-5-(trifluoromethyl)phenyl]-7-methyl-1-[(2-methyl-2H-tetrazol-5-yl)methyl]-1H-indazole, Cytochrome b, Cytochrome b-c1 complex subunit 2, ...
Authors:Di Trani, J.M, Rubinstein, J.L.
Deposit date:2021-07-20
Release date:2021-09-15
Last modified:2022-01-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Rieske head domain dynamics and indazole-derivative inhibition of Candida albicans complex III.
Structure, 30, 2022
1WDS
DownloadVisualize
BU of 1wds by Molmil
The role of an inner loop in the catalytic mechanism of soybean beta-amylase
Descriptor: Beta-amylase, SULFATE ION, alpha-D-glucopyranose, ...
Authors:Kang, Y.N, Adachi, M, Utsumi, S, Mikami, B.
Deposit date:2004-05-17
Release date:2005-04-05
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural analysis of threonine 342 mutants of soybean beta-amylase: role of a conformational change of the inner loop in the catalytic mechanism.
Biochemistry, 44, 2005
7RB7
DownloadVisualize
BU of 7rb7 by Molmil
Room temperature structure of hAChE in complex with substrate analog 4K-TMA and MMB4 oxime
Descriptor: 1,1'-methylenebis{4-[(E)-(hydroxyimino)methyl]pyridin-1-ium}, 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase
Authors:Kovalevsky, A, Gerlits, O, Radic, Z.
Deposit date:2021-07-05
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure
Curr Res Struct Biol, 3, 2021
7RB6
DownloadVisualize
BU of 7rb6 by Molmil
Low temperature structure of hAChE in complex with substrate analog 4K-TMA
Descriptor: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase, GLYCEROL, ...
Authors:Kovalevsky, A, Gerlits, O, Radic, Z.
Deposit date:2021-07-05
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure
Curr Res Struct Biol, 3, 2021
1WQV
DownloadVisualize
BU of 1wqv by Molmil
Human Factor Viia-Tissue Factor Complexed with propylsulfonamide-D-Thr-Met-p-aminobenzamidine
Descriptor: CALCIUM ION, Coagulation factor VII, N-[DIHYDROXY(PROPYL)-LAMBDA~4~-SULFANYL]THREONYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}METHIONINAMIDE, ...
Authors:Kadono, S, Sakamoto, A, Kikuchi, Y, Oh-eda, M, Yabuta, N, Koga, T, Hattori, K, Shiraishi, T, Haramura, M, Kodama, H.
Deposit date:2004-10-02
Release date:2005-10-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human factor VIIa/tissue factor in complex with peptide mimetic inhibitor
Biochem.Biophys.Res.Commun., 324, 2004
7RB5
DownloadVisualize
BU of 7rb5 by Molmil
Room temperature structure of hAChE in complex with substrate analog 4K-TMA
Descriptor: 4,4-DIHYDROXY-N,N,N-TRIMETHYLPENTAN-1-AMINIUM, Acetylcholinesterase
Authors:Kovalevsky, A, Gerlits, O, Radic, Z.
Deposit date:2021-07-05
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Room temperature crystallography of human acetylcholinesterase bound to a substrate analogue 4K-TMA: Towards a neutron structure
Curr Res Struct Biol, 3, 2021
1P6J
DownloadVisualize
BU of 1p6j by Molmil
Rat neuronal NOS heme domain with L-N(omega)-nitroarginine-(4R)-amino-L-proline amide bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, L-N(OMEGA)-NITROARGININE-(4R)-AMINO-L-PROLINE AMIDE, ...
Authors:Flinspach, M.L, Li, H, Jamal, J, Yang, W, Huang, H, Hah, J.-M, Gomez-Vidal, J.A, Litzinger, E.A, Silverman, R.B, Poulos, T.L.
Deposit date:2003-04-29
Release date:2004-01-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase.
Nat.Struct.Mol.Biol., 11, 2004
2HJI
DownloadVisualize
BU of 2hji by Molmil
Structural model for the Fe-containing isoform of acireductone dioxygenase
Descriptor: E-2/E-2' protein, FE (II) ION
Authors:Pochapsky, T.C, Ju, T, Maroney, M.J, Chai, S.C.
Deposit date:2006-06-30
Release date:2006-10-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:One Protein, Two Enzymes Revisited: A Structural Entropy Switch Interconverts the Two Isoforms of Acireductone Dioxygenase
J.Mol.Biol., 363, 2006
2HTL
DownloadVisualize
BU of 2htl by Molmil
Structure of the Escherichia coli ClC chloride channel Y445F mutant and Fab complex
Descriptor: BROMIDE ION, Fab fragment, Heavy chain, ...
Authors:Accardi, A, Lobet, S, Williams, C, Miller, C, Dutzler, R.
Deposit date:2006-07-26
Release date:2006-09-19
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Synergism Between Halide Binding and Proton Transport in a CLC-type Exchanger.
J.Mol.Biol., 362, 2006
1WT1
DownloadVisualize
BU of 1wt1 by Molmil
Mutant ABO(H) blood group glycosyltransferase with bound UDP and acceptor
Descriptor: Histo-blood group ABO system transferase, MERCURY (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Lee, H.J, Barry, C.H, Borisova, S.N, Seto, N.O.L, Zheng, R.B, Blancher, A, Evans, S.V, Palcic, M.M.
Deposit date:2004-11-12
Release date:2004-12-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the inactivity of human blood group o2 glycosyltransferase
J.Biol.Chem., 280, 2005
2HKP
DownloadVisualize
BU of 2hkp by Molmil
SUMO protease Ulp1 with the catalytic cysteine oxidized to a sulfenic acid
Descriptor: Ubiquitin-like-specific protease 1
Authors:Xu, Z, Ng, T.B, Au, S.W.N.
Deposit date:2006-07-05
Release date:2007-07-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis of the redox regulation of SUMO proteases: a protective mechanism of intermolecular disulfide linkage against irreversible sulfhydryl oxidation
Faseb J., 22, 2008
2HNZ
DownloadVisualize
BU of 2hnz by Molmil
Crystal Structure of E138K Mutant HIV-1 Reverse Transcriptase in Complex with PETT-2
Descriptor: 1-[2-(4-ETHOXY-3-FLUOROPYRIDIN-2-YL)ETHYL]-3-(5-METHYLPYRIDIN-2-YL)THIOUREA, PHOSPHATE ION, Reverse transcriptase/ribonuclease H
Authors:Ren, J, Nichols, C.E, Stamp, A, Chamberlain, P.P, Stammers, D.K.
Deposit date:2006-07-13
Release date:2006-09-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural insights into mechanisms of non-nucleoside drug resistance for HIV-1 reverse transcriptases mutated at codons 101 or 138.
Febs J., 273, 2006
1WUA
DownloadVisualize
BU of 1wua by Molmil
The structure of Aplyronine A-actin complex
Descriptor: (8R,9R,10R,11R,14S,18S,20S,24S)-24-{(1R,2S,3R,6R,7R,8R,9S,10E)-8-(ACETYLOXY)-6-[(N,N-DIMETHYLALANYL)OXY]-11-[FORMYL(MET HYL)AMINO]-2-HYDROXY-1,3,7,9-TETRAMETHYLUNDEC-10-ENYL}-10-HYDROXY-14,20-DIMETHOXY-9,11,15,18-TETRAMETHYL-2-OXOOXACYCLOTE TRACOSA-3,5,15,21-TETRAEN-8-YL N,N,O-TRIMETHYLSERINATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
Authors:Hirata, K, Muraoka, S, Suenaga, K, Kuroda, T, Kato, K, Tanaka, H, Yamamoto, M, Takata, M, Yamada, K, Kigoshi, H.
Deposit date:2004-12-03
Release date:2006-02-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure basis for antitumor effect of aplyronine a
J.Mol.Biol., 356, 2006
2HMI
DownloadVisualize
BU of 2hmi by Molmil
HIV-1 REVERSE TRANSCRIPTASE/FRAGMENT OF FAB 28/DNA COMPLEX
Descriptor: DNA (5'-D(*AP*TP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*A)-3'), FAB FRAGMENT OF MONOCLONAL ANTIBODY 28, ...
Authors:Ding, J, Arnold, E.
Deposit date:1998-04-10
Release date:1998-10-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and functional implications of the polymerase active site region in a complex of HIV-1 RT with a double-stranded DNA template-primer and an antibody Fab fragment at 2.8 A resolution.
J.Mol.Biol., 284, 1998
2HNL
DownloadVisualize
BU of 2hnl by Molmil
Structure of the prostaglandin D synthase from the parasitic nematode Onchocerca volvulus
Descriptor: GLUTATHIONE, Glutathione S-transferase 1
Authors:Perbandt, M, Hoppner, J, Betzel, C, Liebau, E.
Deposit date:2006-07-13
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the extracellular glutathione S-transferase OvGST1 from the human pathogenic parasite Onchocerca volvulus.
J.Mol.Biol., 377, 2008
1OUQ
DownloadVisualize
BU of 1ouq by Molmil
Crystal structure of wild-type Cre recombinase-loxP synapse
Descriptor: Cre recombinase, IODIDE ION, MAGNESIUM ION, ...
Authors:Ennifar, E, Meyer, J.E.W, Buchholz, F, Stewart, A.F, Suck, D.
Deposit date:2003-03-25
Release date:2003-09-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1P6M
DownloadVisualize
BU of 1p6m by Molmil
Bovine endothelial NOS heme domain with (4S)-N-(4-amino-5-[aminoethyl]aminopentyl)-N'-nitroguanidine bound
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CACODYLATE ION, ...
Authors:Flinspach, M.L, Li, H, Jamal, J, Yang, W, Huang, H, Hah, J.-M, Gomez-Vidal, J.A, Litzinger, E.A, Silverman, R.B, Poulos, T.L.
Deposit date:2003-04-29
Release date:2004-01-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural basis for dipeptide amide isoform-selective inhibition of neuronal nitric oxide synthase.
Nat.Struct.Mol.Biol., 11, 2004
1X0K
DownloadVisualize
BU of 1x0k by Molmil
Crystal Structure of Bacteriorhodopsin at pH 10
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, ...
Authors:Okumura, H, Murakami, M, Kouyama, T.
Deposit date:2005-03-23
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Acid Blue and Alkaline Purple Forms of Bacteriorhodopsin
J.Mol.Biol., 351, 2005
1X2A
DownloadVisualize
BU of 1x2a by Molmil
Crystal Structure of e.coli AspAT complexed with N-phosphopyridoxyl-D-glutamic acid
Descriptor: Aspartate aminotransferase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC ACID
Authors:Goto, M.
Deposit date:2005-04-21
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Binding of C5-dicarboxylic substrate to aspartate aminotransferase: implications for the conformational change at the transaldimination step.
Biochemistry, 44, 2005
2HTK
DownloadVisualize
BU of 2htk by Molmil
Structure of the Escherichia coli ClC chloride channel Y445A mutant and Fab complex
Descriptor: BROMIDE ION, Fab fragment, Heavy chain, ...
Authors:Accardi, A, Lobet, S, Williams, C, Miller, C, Dutzler, R.
Deposit date:2006-07-26
Release date:2006-09-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Synergism between halide binding and proton transport in a CLC-type exchanger
J.Mol.Biol., 362, 2006
7RMA
DownloadVisualize
BU of 7rma by Molmil
Structure of the fourth UIM (Ubiquitin Interacting Motif) of ANKRD13D in complex with a high affinity UbV (Ubiquitin Variant)
Descriptor: Ankyrin repeat domain-containing protein 13D, SODIUM ION, SULFATE ION, ...
Authors:Singer, A.U, Manczyk, N, Veggiani, G, Sicheri, F, Sidhu, S.S.
Deposit date:2021-07-27
Release date:2022-05-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Panel of Engineered Ubiquitin Variants Targeting the Family of Human Ubiquitin Interacting Motifs.
Acs Chem.Biol., 17, 2022
2HPA
DownloadVisualize
BU of 2hpa by Molmil
STRUCTURAL ORIGINS OF L(+)-TARTRATE INHIBITION OF HUMAN PROSTATIC ACID PHOSPHATASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-PROPYL-TARTRAMIC ACID, ...
Authors:Lacount, M.W, Handy, G, Lebioda, L.
Deposit date:1998-09-11
Release date:1998-09-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural origins of L(+)-tartrate inhibition of human prostatic acid phosphatase.
J.Biol.Chem., 273, 1998
7RIB
DownloadVisualize
BU of 7rib by Molmil
Griffithsin mutant Y28F/Y68F/Y110F
Descriptor: Griffithsin, SULFATE ION, alpha-D-mannopyranose
Authors:Zhao, G, Sun, J, Bewley, C.A.
Deposit date:2021-07-19
Release date:2022-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:C 3 -Symmetric Aromatic Core of Griffithsin Is Essential for Potent Anti-HIV Activity.
Acs Chem.Biol., 17, 2022
7RKI
DownloadVisualize
BU of 7rki by Molmil
Griffithsin-S10Y/S42Y/S88Y
Descriptor: Griffithsin, alpha-D-mannopyranose
Authors:Sun, J.D, Zhao, G.X.
Deposit date:2021-07-22
Release date:2022-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:C 3 -Symmetric Aromatic Core of Griffithsin Is Essential for Potent Anti-HIV Activity.
Acs Chem.Biol., 17, 2022
7RIA
DownloadVisualize
BU of 7ria by Molmil
Griffithsin variant Y28A/Y68A/Y110A
Descriptor: Griffithsin, SULFATE ION, alpha-D-mannopyranose
Authors:Zhao, G, Sun, J, Bewley, C.A.
Deposit date:2021-07-19
Release date:2022-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:C 3 -Symmetric Aromatic Core of Griffithsin Is Essential for Potent Anti-HIV Activity.
Acs Chem.Biol., 17, 2022

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon