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8ENR
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BU of 8enr by Molmil
Cryo-EM structure of E. coli CsgA fibril (260 pixel box size)
Descriptor: Major curlin subunit
Authors:Bu, F, Liu, B.
Deposit date:2022-09-30
Release date:2023-10-04
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insight into Escherichia coli CsgA amyloid fibril assembly.
Mbio, 15, 2024
4Y12
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BU of 4y12 by Molmil
Crystal structure of the S/T protein kinase PknG from Mycobacterium tuberculosis in complex with AGS
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase PknG, ...
Authors:Lisa, M.N, Alzari, P.M.
Deposit date:2015-02-06
Release date:2015-05-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Basis of the Activity and the Regulation of the Eukaryotic-like S/T Protein Kinase PknG from Mycobacterium tuberculosis.
Structure, 23, 2015
8PFE
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BU of 8pfe by Molmil
Crystal Structure of an Hexavariant of the b1 Domain of Human Neuropilin-1 in Complex with the KDKPPR Peptide
Descriptor: ACETATE ION, LYS-ASP-LYS-PRO-PRO-ARG, Neuropilin-1
Authors:Jelsch, C, Favier, F, Didierjean, C.
Deposit date:2023-06-15
Release date:2023-08-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:New Crystal Form of Human Neuropilin-1 b1 Fragment with Six Electrostatic Mutations Complexed with KDKPPR Peptide Ligand.
Molecules, 28, 2023
5MH5
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BU of 5mh5 by Molmil
D-2-hydroxyacid dehydrogenases (D2-HDH) from Haloferax mediterranei in complex with 2-keto-hexanoic acid and NADP+ (1.4 A resolution)
Descriptor: 2-Ketohexanoic acid, D-2-hydroxyacid dehydrogenase, MAGNESIUM ION, ...
Authors:Bisson, C, Baker, P.J, Domenech Perez, J, Pramanpol, N, Harding, S.E, Rice, D.W, Ferrer, J.
Deposit date:2016-11-23
Release date:2018-05-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Productive ternary complexes of D-2-hydroxyacid dehydrogenase provide insights into the chiral specificity of its reaction mechanism
To Be Published
7KBE
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BU of 7kbe by Molmil
Nucleosome isolated from metaphase chromosome formed in Xenopus egg extract (oligo fraction)
Descriptor: DNA (157-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Arimura, Y, Funabiki, H.
Deposit date:2020-10-02
Release date:2021-09-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBD
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BU of 7kbd by Molmil
Nucleosome in interphase chromosome formed in Xenopus egg extract (oligo fraction)
Descriptor: DNA (151-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Arimura, Y, Funabiki, H.
Deposit date:2020-10-02
Release date:2021-09-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBF
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BU of 7kbf by Molmil
H1.8 bound nucleosome isolated from metaphase chromosome in Xenopus egg extract (oligo fraction)
Descriptor: DNA (184-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Arimura, Y, Funabiki, H.
Deposit date:2020-10-02
Release date:2021-09-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.42 Å)
Cite:Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
5X52
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BU of 5x52 by Molmil
Human serum albumin complexed with octanoate and N-acetyl-L-methionine
Descriptor: N-ACETYLMETHIONINE, OCTANOIC ACID (CAPRYLIC ACID), PHOSPHATE ION, ...
Authors:Kawai, A, Otagiri, M.
Deposit date:2017-02-14
Release date:2017-05-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Crystallographic analysis of the ternary complex of octanoate and N-acetyl-l-methionine with human serum albumin reveals the mode of their stabilizing interactions
Biochim. Biophys. Acta, 1865, 2017
5MI7
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BU of 5mi7 by Molmil
BtGH84 mutant with covalent modification by MA4 in complex with PUGNAc
Descriptor: CALCIUM ION, O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE, O-GlcNAcase BT_4395, ...
Authors:Darby, J.F, Davies, G.J, Hubbard, R.E.
Deposit date:2016-11-27
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Increase of enzyme activity through specific covalent modification with fragments.
Chem Sci, 8, 2017
8EL9
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BU of 8el9 by Molmil
Cryo-EM structure of human catalase
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Su, C.C.
Deposit date:2022-09-23
Release date:2023-10-04
Method:ELECTRON MICROSCOPY (2.27 Å)
Cite:Cryo-EM structure of human catalase
To Be Published
5M8B
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BU of 5m8b by Molmil
Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-xylosidase, MAGNESIUM ION, ...
Authors:Logan, D.T, Nordberg Karlsson, E, Linares-Pasten, J.A.
Deposit date:2016-10-28
Release date:2017-05-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis
To Be Published
1P1M
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BU of 1p1m by Molmil
Structure of Thermotoga maritima amidohydrolase TM0936 bound to Ni and methionine
Descriptor: Hypothetical protein TM0936, METHIONINE, NICKEL (II) ION
Authors:Kniewel, R, Buglino, J.A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-04-12
Release date:2003-04-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the hypothetical protein TM0936 from Thermotoga maritima at 1.5A bound to Ni and methionine
To be Published, 2003
4LUF
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BU of 4luf by Molmil
Crystal Structure of Ovine Serum Albumin
Descriptor: (2R)-2-{[(2R)-2-{[(2S)-2-{[(2R)-2-hydroxypropyl]oxy}propyl]oxy}propyl]oxy}propan-1-ol, (2S)-2-hydroxybutanedioic acid, ACETATE ION, ...
Authors:Bujacz, A, Talaj, J.A, Pietrzyk, A.J, Bujacz, G.
Deposit date:2013-07-25
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of ovine serum albumin and its complex with 3,5-diiodosalicylic acid
To be Published
1FCF
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BU of 1fcf by Molmil
PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE
Descriptor: PHOTOSYSTEM II D1 PROTEASE, SULFATE ION
Authors:Liao, D.I, Qian, J, Chisholm, D.A, Jordan, D.B, Diner, B.A.
Deposit date:2000-07-18
Release date:2001-01-18
Last modified:2018-10-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the photosystem II D1 C-terminal processing protease.
Nat.Struct.Biol., 7, 2000
5MCJ
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BU of 5mcj by Molmil
Radiation damage to GH7 Family Cellobiohydrolase from Daphnia pulex: Dose (DWD) 14.1 MGy
Descriptor: Cellobiohydrolase CHBI, GLYCEROL, SULFATE ION
Authors:Bury, C.S, McGeehan, J.E, Ebrahim, A, Garman, E.F.
Deposit date:2016-11-09
Release date:2017-01-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:OH cleavage from tyrosine: debunking a myth.
J Synchrotron Radiat, 24, 2017
8F5I
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BU of 8f5i by Molmil
SARS-CoV-2 S2 helix epitope scaffold bound by antibody DH1057.1
Descriptor: DH1057.1 HC, DH1057.1 LC, Specialized acyl carrier protein, ...
Authors:Kapingidza, A.B, Wrapp, D, Winters, K, Azoitei, M.L.
Deposit date:2022-11-14
Release date:2023-10-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineered immunogens to elicit antibodies against conserved coronavirus epitopes.
Nat Commun, 14, 2023
8Q7C
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BU of 8q7c by Molmil
Cryo-EM structure of Adenovirus C5 hexon
Descriptor: Hexon protein
Authors:Zoll, S, Dhillon, A.
Deposit date:2023-08-16
Release date:2023-08-30
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into the interaction between adenovirus C5 hexon and human lactoferrin.
J.Virol., 98, 2024
8Q3F
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BU of 8q3f by Molmil
Structural studies of human serum albumin using cryo-EM up to 0.38 nm resolution
Descriptor: Serum albumin
Authors:Slawek, J, Taube, M, Rawski, M, Wojciechowska, D, Kozak, M.
Deposit date:2023-08-04
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Structural studies of human serum albumin using cryo-EM up to 0.38 nm resolution
To Be Published
8ENQ
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BU of 8enq by Molmil
E. coli CsgA fibril (218-pixel box size)
Descriptor: Major curlin subunit
Authors:Bu, F, Liu, B.
Deposit date:2022-09-30
Release date:2023-10-04
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insight into Escherichia coli CsgA amyloid fibril assembly.
Mbio, 15, 2024
8F5H
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BU of 8f5h by Molmil
SARS-CoV-2 S2 helix epitope scaffold
Descriptor: S2hlx_EX_19
Authors:Kapingidza, A.B, Wrapp, D, Winters, K, Azoitei, M.L.
Deposit date:2022-11-14
Release date:2023-10-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Engineered immunogens to elicit antibodies against conserved coronavirus epitopes.
Nat Commun, 14, 2023
8ET0
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BU of 8et0 by Molmil
Crystal Complex of murine Cyclooxygenase-2 with alpaca nanobody F9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IBUPROFEN, ...
Authors:Xu, S, Banerjee, S, Uddin, M.J, Goodman, M.C, Marnett, L.J.
Deposit date:2022-10-15
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal complex of murine cycloxygenase-2 with alpaca nanobody F9
To Be Published
7JZQ
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BU of 7jzq by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALPMB
Descriptor: 4-[(piperidin-1-yl)methyl]benzoic acid, Golgi-associated PDZ and coiled-coil motif-containing protein, LyCALPMB peptide core
Authors:Gill, N.P, Madden, D.R.
Deposit date:2020-09-02
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALPMB
To Be Published
8EL5
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BU of 8el5 by Molmil
Light harvesting phycobiliprotein HaPE555 from the cryptophyte Hemiselmis andersenii CCMP644 in an alternating tight to loose interface filament
Descriptor: DiCys-(15,16)-Dihydrobiliverdin, GLYCEROL, PHYCOERYTHROBILIN, ...
Authors:Rathbone, H.W, Michie, K.A, Laos, A.L, Curmi, P.M.G.
Deposit date:2022-09-23
Release date:2023-10-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Molecular dissection of the soluble photosynthetic antenna from the cryptophyte alga Hemiselmis andersenii.
Commun Biol, 6, 2023
6UNW
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BU of 6unw by Molmil
Epoxide hydrolase from an endophytic Streptomyces
Descriptor: CACODYLATE ION, CHLORIDE ION, Soluble epoxide hydrolase
Authors:Wilson, C, dos Santos, J.C, Dias, M.V.B.
Deposit date:2019-10-13
Release date:2020-09-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:An epoxide hydrolase from endophytic Streptomyces shows unique structural features and wide biocatalytic activity.
Acta Crystallogr D Struct Biol, 76, 2020
7JZR
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BU of 7jzr by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAEB
Descriptor: 4-(2-aminoethyl)benzoic acid, Golgi-associated PDZ and coiled-coil motif-containing protein, LyCALAEB peptide core
Authors:Gill, N.P, Madden, D.R.
Deposit date:2020-09-02
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAEB
To Be Published

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PDB entries from 2024-08-14

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