PDB: 72960 resultsInfo pagesStatus searchChemie searchBIRD

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4DH7	Low temperature X-ray structure of cAMP dependent Protein Kinase A catalytic subunit with high Mg2+, AMP-PNP and IP20' Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ... Authors: Kovalevsky, A.Y, Langan, P. Deposit date: 2012-01-27 Release date: 2012-06-27 Last modified: 2013-03-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Low- and room-temperature X-ray structures of protein kinase A ternary complexes shed new light on its activity. Acta Crystallogr.,Sect.D, 68, 2012
8E2W	Structure of CRISPR-Associated DinG Descriptor: CasDinG Authors: Domgaard, H, Jackson, R.N. Deposit date: 2022-08-16 Release date: 2023-06-21 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.95 Å) Cite: CasDinG is a 5'-3' dsDNA and RNA/DNA helicase with three accessory domains essential for type IV CRISPR immunity. Nucleic Acids Res., 51, 2023
5KYG	RAWV_CTD (Loop Structure) of 16S/23S 2'-O-methyltransferase TlyA Descriptor: Cytotoxin / haemolysin homologue TlyA, GLYCEROL Authors: Kuiper, E.G, Conn, G.L. Deposit date: 2016-07-21 Release date: 2017-01-04 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A Novel Motif for S-Adenosyl-l-methionine Binding by the Ribosomal RNA Methyltransferase TlyA from Mycobacterium tuberculosis. J. Biol. Chem., 292, 2017
4DH3	Low temperature X-ray structure of cAMP dependent Protein Kinase A catalytic subunit with high Mg2+, ATP and IP20 Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ... Authors: Kovalevsky, A.Y, Langan, P. Deposit date: 2012-01-27 Release date: 2012-06-27 Last modified: 2013-03-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Low- and room-temperature X-ray structures of protein kinase A ternary complexes shed new light on its activity. Acta Crystallogr.,Sect.D, 68, 2012
4QJD	Crystal Structure of Twister with the Nucleotide 5'- to the Cleavage Site Disordered at 3.1 A Resolution Descriptor: MAGNESIUM ION, Twister RNA sequence Authors: Eiler, D.R, Wang, J, Steitz, T.A. Deposit date: 2014-06-03 Release date: 2014-09-03 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural basis for the fast self-cleavage reaction catalyzed by the twister ribozyme. Proc.Natl.Acad.Sci.USA, 111, 2014
7YFJ	Crystal structure of human WTAP Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Pre-mRNA-splicing regulator WTAP Authors: Yan, X.H, Guan, Z.Y, Tang, C, Yin, P. Deposit date: 2022-07-08 Release date: 2023-01-25 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.4 Å) Cite: AI-empowered integrative structural characterization of m 6 A methyltransferase complex. Cell Res., 32, 2022
3L7V	Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159 Descriptor: Putative uncharacterized protein smu.1377c, SULFATE ION Authors: Su, X.-D, Fu, T.-M, Liu, X. Deposit date: 2009-12-29 Release date: 2010-07-21 Last modified: 2018-05-30 Method: X-RAY DIFFRACTION (2.256 Å) Cite: The structure of the hypothetical protein smu.1377c from Streptococcus mutans suggests a role in tRNA modification Acta Crystallogr.,Sect.F, 66, 2010
100D	CRYSTAL STRUCTURE OF THE HIGHLY DISTORTED CHIMERIC DECAMER R(C)D(CGGCGCCG)R(G)-SPERMINE COMPLEX-SPERMINE BINDING TO PHOSPHATE ONLY AND MINOR GROOVE TERTIARY BASE-PAIRING Descriptor: DNA/RNA (5'-R(*CP*)-D(*CP*GP*GP*CP*GP*CP*CP*GP*)-R(*G)-3'), SPERMINE Authors: Ban, C, Ramakrishnan, B, Sundaralingam, M. Deposit date: 1994-12-05 Release date: 1995-03-31 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the highly distorted chimeric decamer r(C)d(CGGCGCCG)r(G).spermine complex--spermine binding to phosphate only and minor groove tertiary base-pairing. Nucleic Acids Res., 22, 1994
2DB1	Solution structure of the RNA binding domain in heterogeneous nuclear ribonucleoprotein F homolog Descriptor: heterogeneous nuclear ribonucleoprotein F Authors: Abe, C, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2005-12-14 Release date: 2006-06-14 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the RNA binding domain in heterogeneous nuclear ribonucleoprotein F homolog To be Published
3SKW	Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cesium soak Descriptor: 2'-DEOXY-GUANOSINE, CESIUM ION, MAGNESIUM ION, ... Authors: Pikovskaya, O, Polonskaia, A, Patel, D.J, Serganov, A. Deposit date: 2011-06-23 Release date: 2011-08-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Structural principles of nucleoside selectivity in a 2'-deoxyguanosine riboswitch. Nat.Chem.Biol., 7, 2011
2WBB	FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR Descriptor: FRUCTOSE-1,6-BISPHOSPHATASE 1, N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)-YLIDENE]CARBAMOYL}-4-METHYLBENZENESULFONAMIDE Authors: Ruf, A, Joseph, C, Benz, J, Fol, B, Tetaz, T, Kitas, E, Mohr, P, Kuhn, B, Wessel, H.P, Hebeisen, P, Haap, W, Huber, W, Alvarez Sanchez, R, Paehler, A, Bernadeau, A, Gubler, M, Schott, B, Tozzo, E. Deposit date: 2009-02-26 Release date: 2009-12-22 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Sulfonylureido Thiazoles as Fructose-1,6-Bisphosphatase Inhibitors for the Treatment of Type-2 Diabetes. Bioorg.Med.Chem.Lett., 20, 2010
1AYM	HUMAN RHINOVIRUS 16 COAT PROTEIN AT HIGH RESOLUTION Descriptor: HUMAN RHINOVIRUS 16 COAT PROTEIN, LAURIC ACID, MYRISTIC ACID, ... Authors: Hadfield, A.T, Rossmann, M.G. Deposit date: 1997-11-06 Release date: 1998-01-21 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.15 Å) Cite: The refined structure of human rhinovirus 16 at 2.15 A resolution: implications for the viral life cycle. Structure, 5, 1997
7L4X	YTH Domain of Human YTHDC1 with dsDNA Comprising Single N6mA joined by two six-bp DNA duplexes in P3221 Crystal Descriptor: 1,2-ETHANEDIOL, YTH domain-containing protein 1, ssDNA w/N6A Authors: Horton, J.R, Cheng, X. Deposit date: 2020-12-21 Release date: 2021-11-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Human MettL3-MettL14 RNA adenine methyltransferase complex is active on double-stranded DNA containing lesions. Nucleic Acids Res., 49, 2021
7L4Y	YTH Domain of Human YTHDC1 with dsDNA Comprising Single N6mA joined by Two Six-bp DNA Duplexes in P212121 Crystal Descriptor: 1,2-ETHANEDIOL, YTH domain-containing protein 1, ssDNA 13mer Authors: Horton, J.R, Cheng, X. Deposit date: 2020-12-21 Release date: 2021-11-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Human MettL3-MettL14 RNA adenine methyltransferase complex is active on double-stranded DNA containing lesions. Nucleic Acids Res., 49, 2021
3K8D	Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase in complex with CTP and 2-deoxy-Kdo Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, 3-deoxy-manno-octulosonate cytidylyltransferase, CYTIDINE-5'-TRIPHOSPHATE, ... Authors: Heyes, D.J, Levy, C.W, Lafite, P, Scrutton, N.S, Leys, D. Deposit date: 2009-10-14 Release date: 2009-11-10 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structure-based mechanism of CMP-2-keto-3-deoxymanno-octulonic acid synthetase: convergent evolution of a sugar-activating enzyme with DNA/RNA polymerases J.Biol.Chem., 284, 2009
3K8E	Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase Descriptor: 3-deoxy-manno-octulosonate cytidylyltransferase Authors: Heyes, D.J, Levy, C.W, Lafite, P, Scrutton, N.S, Leys, D. Deposit date: 2009-10-14 Release date: 2009-11-10 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.51 Å) Cite: Structure-based mechanism of CMP-2-keto-3-deoxymanno-octulonic acid synthetase: convergent evolution of a sugar-activating enzyme with DNA/RNA polymerases J.Biol.Chem., 284, 2009
3G8S	Crystal structure of the pre-cleaved Bacillus anthracis glmS ribozyme Descriptor: GLMS RIBOZYME, MAGNESIUM ION, RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3'), ... Authors: Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. Deposit date: 2009-02-12 Release date: 2009-11-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009
4M3O	Crystal structure of K.lactis Rtr1 NTD Descriptor: KLLA0F12672p, ZINC ION Authors: Hsu, P.L, Yang, W, Zheng, N, Varani, G. Deposit date: 2013-08-06 Release date: 2014-07-16 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Rtr1 Is a Dual Specificity Phosphatase That Dephosphorylates Tyr1 and Ser5 on the RNA Polymerase II CTD. J.Mol.Biol., 426, 2014
3BZK	Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form 2 Descriptor: Tex Authors: Johnson, S.J, Close, D, Hill, C.P. Deposit date: 2008-01-18 Release date: 2008-04-08 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure and RNA binding of the Tex protein from Pseudomonas aeruginosa. J.Mol.Biol., 377, 2008
7P84	Crystal structure of L147A/I351A variant of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii in complex with ONB-SAM (2-nitro benzyme S-adenosyl-methionine) Descriptor: MAGNESIUM ION, S-adenosylmethionine synthase, TRIPHOSPHATE, ... Authors: Herrmann, E, Peters, A, Cornelissen, N.V, Rentmeister, A, Kuemmel, D. Deposit date: 2021-07-21 Release date: 2021-11-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.054 Å) Cite: Visible-Light Removable Photocaging Groups Accepted by MjMAT Variant: Structural Basis and Compatibility with DNA and RNA Methyltransferases. Chembiochem, 23, 2022
7P8M	Crystal structure of L147A/I351A variant of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii in complex with DMNB-SAM (4,5-dimethoxy-2-nitro benzyme S-adenosyl-methionine) Descriptor: 4,5-dimethoxy-2-nitro benzyme S-adenosyl-methionine, MAGNESIUM ION, S-adenosylmethionine synthase, ... Authors: Herrmann, E, Peters, A, Cornelissen, N.V, Rentmeister, A, Kuemmel, D. Deposit date: 2021-07-23 Release date: 2021-11-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.71 Å) Cite: Visible-Light Removable Photocaging Groups Accepted by MjMAT Variant: Structural Basis and Compatibility with DNA and RNA Methyltransferases. Chembiochem, 23, 2022
7P82	Crystal structure of apo form L147A/I351A variant of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii Descriptor: S-adenosylmethionine synthase Authors: Herrmann, E, Peters, A, Cornelissen, N.V, Rentmeister, A, Kuemmel, D. Deposit date: 2021-07-21 Release date: 2021-11-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.042 Å) Cite: Visible-Light Removable Photocaging Groups Accepted by MjMAT Variant: Structural Basis and Compatibility with DNA and RNA Methyltransferases. Chembiochem, 23, 2022
7P83	Crystal structure of Apo form of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii Descriptor: S-adenosylmethionine synthase Authors: Herrmann, E, Peters, A, Cornelissen, N.V, Rentmeister, A, Kuemmel, D. Deposit date: 2021-07-21 Release date: 2021-11-17 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.218 Å) Cite: Visible-Light Removable Photocaging Groups Accepted by MjMAT Variant: Structural Basis and Compatibility with DNA and RNA Methyltransferases. Chembiochem, 23, 2022
2WBD	FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR Descriptor: FRUCTOSE-1,6-BISPHOSPHATASE 1, N-[(5-bromo-1,3-thiazol-2-yl)carbamoyl]-3-ethylbenzenesulfonamide Authors: Ruf, A, Joseph, C, Benz, J, Fol, B, Tetaz, T, Kitas, E, Mohr, P, Kuhn, B, Wessel, H.P, Hebeisen, P, Haap, W, Huber, W, Alvarez Sanchez, R, Paehler, A, Bernadeau, A, Gubler, M, Schott, B, Tozzo, E. Deposit date: 2009-02-26 Release date: 2009-12-22 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Sulfonylureido Thiazoles as Fructose-1,6-Bisphosphatase Inhibitors for the Treatment of Type-2 Diabetes. Bioorg.Med.Chem.Lett., 20, 2010
3G96	Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-mannopyranose, GLMS RIBOZYME, MAGNESIUM ION, ... Authors: Strobel, S.A, Cochrane, J.C, Lipchock, S.V, Smith, K.D. Deposit date: 2009-02-12 Release date: 2009-11-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.01 Å) Cite: Structural and chemical basis for glucosamine 6-phosphate binding and activation of the glmS ribozyme Biochemistry, 48, 2009

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