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6IGH
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BU of 6igh by Molmil
Crystal structure of FT condition3
Descriptor: 1,2-ETHANEDIOL, Protein FLOWERING LOCUS T
Authors:Watanabe, S, Nakamura, Y, Kanehara, K, Inaba, K.
Deposit date:2018-09-25
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:High-Resolution Crystal Structure of Arabidopsis FLOWERING LOCUS T Illuminates Its Phospholipid-Binding Site in Flowering.
Iscience, 21, 2019
8PFQ
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BU of 8pfq by Molmil
RNA structure with 1-methylpseudoridine, P1 space group
Descriptor: Chains: A,B, MAGNESIUM ION
Authors:Spingler, B, McAuley, K, Nievergelt, P, Thorn, A.
Deposit date:2023-06-16
Release date:2024-01-31
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:RNA oligomers at atomic resolution containing 1-methylpseudouridine, an essential building block of mRNA vaccines.
Chemmedchem, 19, 2024
4RNE
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BU of 4rne by Molmil
Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions
Descriptor: CALCIUM ION, RNA (5'-R(*UP*GP*GP*GP*GP*U)-3'), SODIUM ION, ...
Authors:Fyfe, A.C, Dunten, P.W, Scott, W.G.
Deposit date:2014-10-24
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Structural Variations and Solvent Structure of r(UGGGGU) Quadruplexes Stabilized by Sr(2+) Ions.
J.Mol.Biol., 427, 2015
8E09
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BU of 8e09 by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF M100E construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Kirsh, J.M, Weaver, J.B, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
8DZY
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BU of 8dzy by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF I49T construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Weaver, J.B, Kirsh, J.M, Boxer, S.G.
Deposit date:2022-08-08
Release date:2022-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Protic and Aprotic Interactions Systematically Perturbed and Mapped via MD and IR Spectroscopy
To Be Published
3SK2
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BU of 3sk2 by Molmil
Crystal structure of phenazine resistance protein EhpR from Enterobacter agglomerans (Erwinia herbicola, Pantoea agglomerans) Eh1087 in complex with griseoluteic acid
Descriptor: 6-formyl-9-methoxyphenazine-1-carboxylic acid, EhpR
Authors:Blankenfeldt, W, Yu, S.
Deposit date:2011-06-22
Release date:2011-08-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Atomic resolution structure of EhpR: phenazine resistance in Enterobacter agglomerans Eh1087 follows principles of bleomycin / mitomycin C resistance in other bacteria.
Bmc Struct.Biol., 11, 2011
8ONV
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BU of 8onv by Molmil
KRAS-G13D in complex with BI-2493
Descriptor: (7~{S})-2'-azanyl-3-[2-[(2~{S})-2-methylpiperazin-1-yl]pyrimidin-4-yl]spiro[5,6-dihydro-4~{H}-1,2-benzoxazole-7,4'-6,7-dihydro-5~{H}-1-benzothiophene]-3'-carbonitrile, 1,2-ETHANEDIOL, GTPase KRas, ...
Authors:Boettcher, J, Herdeis, L.
Deposit date:2023-04-04
Release date:2023-06-07
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Pan-KRAS inhibitor disables oncogenic signalling and tumour growth.
Nature, 619, 2023
8FNS
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BU of 8fns by Molmil
X-ray crystal structure of Methylorubrum extorquens AM1 lanmodulin (LanM) with neodymium (III) bound at pH 7
Descriptor: EF-hand domain-containing protein, Neodymium Ion
Authors:Jung, J.J, Lin, C.-Y, Boal, A.K.
Deposit date:2022-12-28
Release date:2023-06-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Enhanced rare-earth separation with a metal-sensitive lanmodulin dimer.
Nature, 618, 2023
8BJ8
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BU of 8bj8 by Molmil
Desulfovibrio desulfuricans FeFe Hydrogenase C178A mutant in Htrans-like state
Descriptor: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ...
Authors:Bikbaev, K, Span, I.
Deposit date:2022-11-03
Release date:2023-04-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases.
Chem Sci, 14, 2023
5RCT
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BU of 5rct by Molmil
PanDDA analysis group deposition -- Endothiapepsin ground state model 15
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, Endothiapepsin, ...
Authors:Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
Deposit date:2020-03-24
Release date:2020-06-03
Last modified:2020-06-17
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
5RV2
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BU of 5rv2 by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000311783
Descriptor: N-benzylpyrazine-2-carboxamide, Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-09-28
Release date:2020-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
5RUU
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BU of 5ruu by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000438614
Descriptor: N-(1,3,4-thiadiazol-2-yl)benzenesulfonamide, Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-09-28
Release date:2020-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
6CLJ
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BU of 6clj by Molmil
1.01 A MicroED structure of GSNQNNF at 0.50 e- / A^2
Descriptor: ACETATE ION, GSNQNNF, ZINC ION
Authors:Hattne, J, Shi, D, Glynn, C, Zee, C.-T, Gallagher-Jones, M, Martynowycz, M.W, Rodriguez, J.A, Gonen, T.
Deposit date:2018-03-02
Release date:2018-05-16
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (1.01 Å)
Cite:Analysis of Global and Site-Specific Radiation Damage in Cryo-EM.
Structure, 26, 2018
7L3R
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BU of 7l3r by Molmil
23S Sarcin Ricin Loop with a 3-deazapurine A2670
Descriptor: GLYCEROL, RNA (27-MER)
Authors:Ennifar, E, Renard, E.
Deposit date:2020-12-18
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Impact of 3-deazapurine nucleobases on RNA properties.
Nucleic Acids Res., 49, 2021
7UYA
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BU of 7uya by Molmil
Inhibitor bound VIM1
Descriptor: (2M)-4'-(piperidin-4-yl)-2-(1H-tetrazol-5-yl)[1,1'-biphenyl]-3-sulfonamide, Beta-lactamase VIM-1, ZINC ION
Authors:Fischmann, T.O, Scapin, G.
Deposit date:2022-05-06
Release date:2023-05-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Structure Guided Discovery of Novel Pan Metallo-beta-Lactamase Inhibitors with Improved Gram-Negative Bacterial Cell Penetration.
J.Med.Chem., 67, 2024
5SP3
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BU of 5sp3 by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000450476923 - (S,R) isomer
Descriptor: Non-structural protein 3, [(2S,6R)-6-methyl-4-(9H-pyrimido[4,5-b]indol-4-yl)morpholin-2-yl]methanol
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-06-09
Release date:2022-07-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Iterative computational design and crystallographic screening identifies potent inhibitors targeting the Nsp3 macrodomain of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 120, 2023
1SXX
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BU of 1sxx by Molmil
1.0 A Crystal Structure of D129A/L130A Mutant of Nitrophorin 4 Complexed with Nitric Oxide
Descriptor: NITRIC OXIDE, Nitrophorin 4, PHOSPHATE ION, ...
Authors:Maes, E.M, Weichsel, A, Andersen, J.F, Shepley, D, Montfort, W.R.
Deposit date:2004-03-31
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Role of binding site loops in controlling nitric oxide release: structure and kinetics of mutant forms of nitrophorin 4
Biochemistry, 43, 2004
4ZA9
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BU of 4za9 by Molmil
Structure of A. niger fdc1 in complex with a phenylpyruvate derived adduct to the prenylated flavin cofactor
Descriptor: 1-deoxy-5-O-phosphono-1-[(1S)-3,3,4,5-tetramethyl-9,11-dioxo-1-(phenylacetyl)-2,3,8,9,10,11-hexahydro-1H,7H-quinolino[1 ,8-fg]pteridin-7-yl]-D-ribitol, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Payne, K.A.P, Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
3ZIY
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BU of 3ziy by Molmil
Structure of three-domain heme-Cu nitrite reductase from Ralstonia pickettii at 1.01 A resolution
Descriptor: COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, HEME C
Authors:Antonyuk, S.V, Han, C, Eady, R.R, Hasnain, S.S.
Deposit date:2013-01-14
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Structures of protein-protein complexes involved in electron transfer.
Nature, 496, 2013
5E1P
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BU of 5e1p by Molmil
Ca(2+)-Calmodulin from Paramecium tetraurelia qFit disorder model
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Calmodulin
Authors:Lin, J, van den Bedem, H, Brunger, A.T, Wilson, M.A.
Deposit date:2015-09-29
Release date:2015-11-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Atomic resolution experimental phase information reveals extensive disorder and bound 2-methyl-2,4-pentanediol in Ca(2+)-calmodulin.
Acta Crystallogr D Struct Biol, 72, 2016
7H47
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BU of 7h47 by Molmil
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z1270393711 (A71EV2A-x0571)
Descriptor: 5-(methoxymethyl)-1,2-oxazole-3-carboxamide, DIMETHYL SULFOXIDE, Protease 2A, ...
Authors:Lithgo, R.M, Fairhead, M, Koekemoer, L, Balcomb, B.H, Capkin, E, Chandran, A.V, Golding, M, Godoy, A.S, Aschenbrenner, J.C, Marples, P.G, Ni, X, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Fearon, D, von Delft, F.
Deposit date:2024-04-04
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease
To Be Published
5RDM
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BU of 5rdm by Molmil
PanDDA analysis group deposition -- Endothiapepsin ground state model 46
Descriptor: Endothiapepsin
Authors:Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
Deposit date:2020-03-24
Release date:2020-06-03
Last modified:2020-06-17
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
5RDE
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BU of 5rde by Molmil
PanDDA analysis group deposition -- Endothiapepsin ground state model 36
Descriptor: Endothiapepsin
Authors:Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G.
Deposit date:2020-03-24
Release date:2020-06-03
Last modified:2020-06-17
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
5RUJ
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BU of 5ruj by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000404314
Descriptor: (5-bromo-1H-indol-3-yl)acetic acid, Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-09-28
Release date:2020-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
5RTI
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BU of 5rti by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000004219237
Descriptor: 3-(5-chloranyl-1,3-benzothiazol-2-yl)propanoic acid, Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-09-28
Release date:2020-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021

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