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7CKI
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BU of 7cki by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with chuangxinmycin and ATP
Descriptor: (5~{S},6~{R})-5-methyl-7-thia-2-azatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-6-carboxylic acid, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lyu, G, Fan, S, Jin, Y, Liu, J, Zou, S, Wu, G, Yang, Z.
Deposit date:2020-07-17
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with chuangxinmycin and ATP
To Be Published
7CMS
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BU of 7cms by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with chuangxinmycin
Descriptor: (5~{S},6~{R})-5-methyl-7-thia-2-azatricyclo[6.3.1.0^{4,12}]dodeca-1(12),3,8,10-tetraene-6-carboxylic acid, PHOSPHATE ION, Tryptophan--tRNA ligase
Authors:Lyu, G, Fan, S, Jin, Y, Zou, S, Wu, G, Yang, Z.
Deposit date:2020-07-28
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the specific interaction between Geobacillus stearothermophilus tryptophanyl-tRNA synthetase and antimicrobial Chuangxinmycin.
J.Biol.Chem., 298, 2022
1I9X
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BU of 1i9x by Molmil
CRYSTAL STRUCTURE OF BPS-U2 SNRNA DUPLEX
Descriptor: 5'-R(*UP*AP*CP*UP*AP*AP*CP*GP*UP*AP*GP*UP*A)-3'
Authors:Berglund, J.A, Rosbash, M, Schultz, S.C.
Deposit date:2001-03-21
Release date:2001-09-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal structure of a model branchpoint-U2 snRNA duplex containing bulged adenosines.
RNA, 7, 2001
2CFO
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BU of 2cfo by Molmil
Non-Discriminating Glutamyl-tRNA Synthetase from Thermosynechococcus elongatus in Complex with Glu
Descriptor: GLUTAMIC ACID, GLUTAMYL-TRNA SYNTHETASE
Authors:Schulze, J.O, Nickel, D, Schubert, W.-D, Jahn, D, Heinz, D.W.
Deposit date:2006-02-22
Release date:2006-08-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of a Non-Discriminating Glutamyl- tRNA Synthetase.
J.Mol.Biol., 361, 2006
6B1P
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BU of 6b1p by Molmil
Crystal Structure of Glutamate-tRNA Synthetase from Helicobacter pylori
Descriptor: 1,2-ETHANEDIOL, Glutamate--tRNA ligase 1
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-09-18
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Glutamate-tRNA Synthetase from Helicobacter pylori
to be published
6AO8
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BU of 6ao8 by Molmil
Crystal structure of arginyl-tRNA_synthetase from Neisseria gonorrhoeae in complex with arginine
Descriptor: ARGININE, Arginine--tRNA ligase, GLYCEROL
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-08-15
Release date:2017-08-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of arginyl-tRNA_synthetase from Neisseria gonorrhoeae in complex with arginine
To be Published
2AP0
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BU of 2ap0 by Molmil
Solution Structure of the C27A ScYLV P1-P2 Frameshifting Pseudoknot, 20 Lowest Energy Structures
Descriptor: C27A Sugarcane Yellow Leaf Virus RNA pseudoknot
Authors:Cornish, P.V, Giedroc, D.P.
Deposit date:2005-08-15
Release date:2006-09-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The global structures of a wild-type and poorly functional plant luteoviral mRNA pseudoknot are essentially identical
Rna, 12, 2006
7EER
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BU of 7eer by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with 05E6 and ATP
Descriptor: 2-(1H-indol-3-yl)ethanol, ADENOSINE-5'-TRIPHOSPHATE, Tryptophan--tRNA ligase
Authors:Lv, G, Fan, S, Feng, X, Zhang, Q, Wu, G, Jin, Y, Yang, Z.
Deposit date:2021-03-19
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with O5E6 and ATP
To Be Published
1R1B
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BU of 1r1b by Molmil
EPRS SECOND REPEATED ELEMENT, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: TRNA SYNTHETASE
Authors:Cahuzac, B, Berthonneau, E, Birlirakis, N, Mirande, M, Guittet, E.
Deposit date:1998-12-15
Release date:1999-12-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:A recurrent RNA-binding domain is appended to eukaryotic aminoacyl-tRNA synthetases.
EMBO J., 19, 2000
4HPW
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BU of 4hpw by Molmil
Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine
Descriptor: 3-methoxy-L-tyrosine, Tyrosine--tRNA ligase
Authors:Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
Deposit date:2012-10-24
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine
To be Published
2L54
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BU of 2l54 by Molmil
Solution structure of the Zalpha domain mutant of ADAR1 (N43A,Y47A)
Descriptor: Double-stranded RNA-specific adenosine deaminase
Authors:Zhao, J, Pervushin, K, Feng, S, Droge, P.
Deposit date:2010-10-24
Release date:2011-01-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Alternate rRNA secondary structures as regulators of translation
Nat.Struct.Mol.Biol., 18, 2011
4PBS
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BU of 4pbs by Molmil
Crystal structure of the M. jannaschii F9 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Descriptor: 4-[(2-bromo-2-methylpropanoyl)amino]-L-phenylalanine, Tyrosine--tRNA ligase
Authors:Cooley, R.B, Karplus, P.A, Mehl, R.A.
Deposit date:2014-04-13
Release date:2014-07-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.011 Å)
Cite:Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
4PBR
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BU of 4pbr by Molmil
Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-(2-bromoisobutyramido)-phenylalanine (BibaF)
Descriptor: 4-[(2-bromo-2-methylpropanoyl)amino]-L-phenylalanine, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Cooley, R.B, Karplus, P.A, Mehl, R.A.
Deposit date:2014-04-13
Release date:2014-07-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
4PBT
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BU of 4pbt by Molmil
Crystal structure of the M. jannaschii G2 tRNA synthetase variant bound to 4-trans-cyclooctene-amidopheylalanine (Tco-amF)
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 4-{[(1R,4E)-cyclooct-4-en-1-ylcarbonyl]amino}-L-phenylalanine, GLYCEROL, ...
Authors:Cooley, R.B, Karplus, P.A, Mehl, R.A.
Deposit date:2014-04-13
Release date:2014-07-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Gleaning Unexpected Fruits from Hard-Won Synthetases: Probing Principles of Permissivity in Non-canonical Amino Acid-tRNA Synthetases.
Chembiochem, 15, 2014
1CQ5
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BU of 1cq5 by Molmil
NMR STRUCTURE OF SRP RNA DOMAIN IV
Descriptor: SRP RNA DOMAIN IV
Authors:Schmitz, U, James, T.L, Behrens, S, Freymann, D.M, Lukavsky, P, Walter, P.
Deposit date:1999-08-05
Release date:1999-08-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the phylogenetically most conserved domain of SRP RNA.
RNA, 5, 1999
1S03
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BU of 1s03 by Molmil
The Structure of a Ribosomal Protein S8/spc Operon mRNA Complex
Descriptor: 30S ribosomal protein S8, 47-MER, ZINC ION
Authors:Merianos, H.J, Wang, J, Moore, P.B.
Deposit date:2003-12-29
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of a ribosomal protein S8/spc operon mRNA complex.
RNA, 10, 2004
1CQL
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BU of 1cql by Molmil
NMR STRUCTURE OF SRP RNA DOMAIN IV
Descriptor: SRP DOMAIN IV RNA
Authors:Schmitz, U, James, T.L.
Deposit date:1999-08-06
Release date:2000-01-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the phylogenetically most conserved domain of SRP RNA.
RNA, 5, 1999
4HK4
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BU of 4hk4 by Molmil
Crystal structure of apo Tyrosine-tRNA ligase mutant protein
Descriptor: DI(HYDROXYETHYL)ETHER, Tyrosine--tRNA ligase
Authors:Yu, Y, Zhou, Q, Dong, J, Li, J, Xiaoxuan, L, Mukherjee, A, Ouyang, H, Nilges, M, Li, H, Gao, F, Gong, W, Lu, Y, Wang, J.
Deposit date:2012-10-15
Release date:2013-04-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Crystal structure of apo Tyrosine-tRNA ligase mutant protein
To be Published
6BRL
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BU of 6brl by Molmil
Crystal structure of a glutamate tRNA ligase from Elizabethkingia meningosepticum CCUG26117 in complex with its amino acid
Descriptor: 1,2-ETHANEDIOL, GLUTAMIC ACID, Glutamate tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-11-30
Release date:2018-01-17
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of glutamyl-tRNA synthetase from Elizabethkingia anopheles and E. meningosepticum.
Acta Crystallogr.,Sect.F, 78, 2022
1RKJ
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BU of 1rkj by Molmil
Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target
Descriptor: 5'-R(*GP*GP*AP*UP*GP*CP*CP*UP*CP*CP*CP*GP*AP*GP*UP*GP*CP*AP*UP*CP*C)-3', Nucleolin
Authors:Johansson, C, Finger, L.D, Trantirek, L, Mueller, T.D, Kim, S, Laird-Offringa, I.A, Feigon, J.
Deposit date:2003-11-21
Release date:2004-04-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target.
J.Mol.Biol., 337, 2004
1T0K
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BU of 1t0k by Molmil
Joint X-ray and NMR Refinement of Yeast L30e-mRNA complex
Descriptor: 5'-R(*G*GP*AP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*GP*UP*C)-3', 5'-R(*GP*AP*CP*CP*GP*GP*AP*GP*UP*GP*UP*CP*C)-3', 60S ribosomal protein L30, ...
Authors:Chao, J.A, Williamson, J.R.
Deposit date:2004-04-09
Release date:2004-07-20
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Joint X-Ray and NMR Refinement of the Yeast L30e-mRNA Complex
Structure, 12, 2004
2EL7
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BU of 2el7 by Molmil
Crystal structure of Tryptophanyl-tRNA synthetase from Thermus thermophilus
Descriptor: PHOSPHATE ION, Tryptophanyl-tRNA synthetase
Authors:Yanagisawa, T, Sumida, T, Ishii, R, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-26
Release date:2008-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Tryptophanyl-tRNA synthetase from Thermus thermophilus
To be published
6HMF
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BU of 6hmf by Molmil
D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease) H451 proof-reading deficient variant
Descriptor: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
Authors:Raia, P, Delarue, M, Sauguet, L.
Deposit date:2018-09-12
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases.
PLoS Biol., 17, 2019
6HMS
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BU of 6hms by Molmil
Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA
Descriptor: DNA (5'-D(*GP*AP*GP*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*TP*C)-3'), DNA (5'-D(P*TP*GP*AP*CP*GP*CP*GP*GP*CP*CP*CP*GP*TP*CP*TP*C)-3'), DNA polymerase II large subunit,DNA polymerase II large subunit, ...
Authors:Raia, P, Carroni, M, Sauguet, L.
Deposit date:2018-09-12
Release date:2019-01-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases.
PLoS Biol., 17, 2019
2ZP1
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BU of 2zp1 by Molmil
Structual basis of iodo-tyrosine recognition by engineered archeal tyrosyl-tRNA synthetase
Descriptor: 3-IODO-TYROSINE, Tyrosyl-tRNA synthetase
Authors:Oki, K, Kobayashi, T, Sakamoto, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-06-22
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structual Basis of Iodo-Tyrosine Recognition by Engineered Archeal Tyrosyl-tRNA Synthetase
To be Published

223532

PDB entries from 2024-08-07

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