Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3HAX
DownloadVisualize
BU of 3hax by Molmil
Crystal structure of a substrate-bound Gar1-minus H/ACA RNP from Pyrococcus furiosus
Descriptor: 1,2-ETHANEDIOL, 5'-R(*AP*UP*AP*AP*UP*UP*(FHU)P*GP*AP*CP*UP*CP*AP*A)-3', 50S ribosomal protein L7Ae, ...
Authors:Ye, K.
Deposit date:2009-05-03
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural mechanism of substrate RNA recruitment in H/ACA RNA-guided pseudouridine synthase.
Mol.Cell, 34, 2009
5O0C
DownloadVisualize
BU of 5o0c by Molmil
Crystal structure of Phosphopantetheine adenylyltransferase from Mycobacterium abcessus in complex with 3-(3-methyl-1H-indol-1-yl)propanoic acid (Fragment 3)
Descriptor: 3-(3-methylindol-1-yl)propanoic acid, Phosphopantetheine adenylyltransferase
Authors:Thomas, S.E, Kim, S.Y, Mendes, V, Blaszczyk, M, Blundell, T.L.
Deposit date:2017-05-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.642 Å)
Cite:Structural Biology and the Design of New Therapeutics: From HIV and Cancer to Mycobacterial Infections: A Paper Dedicated to John Kendrew.
J. Mol. Biol., 429, 2017
2LLJ
DownloadVisualize
BU of 2llj by Molmil
Structure of a bis-naphthalene bound to a thymine-thymine DNA mismatch
Descriptor: 6,22-dioxa-3,9,19,25-tetraazoniapentacyclo[25.5.3.3~11,17~.0~14,37~.0~30,34~]octatriaconta-1(33),11(38),12,14(37),15,17(36),27,29,31,34-decaene, DNA (5'-D(*CP*GP*TP*CP*GP*TP*AP*GP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*CP*TP*TP*CP*GP*AP*CP*G)-3')
Authors:Jourdan, M, Granzhan, A, Guillot, R, Dumy, P, Teulade-Fichou, M.
Deposit date:2011-11-10
Release date:2013-02-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Double threading through DNA: NMR structural study of a bis-naphthalene macrocycle bound to a thymine-thymine mismatch.
Nucleic Acids Res., 40, 2012
4HNW
DownloadVisualize
BU of 4hnw by Molmil
The NatA Acetyltransferase Complex Bound To Inositol Hexakisphosphate
Descriptor: INOSITOL HEXAKISPHOSPHATE, N-terminal acetyltransferase A complex catalytic subunit ARD1, N-terminal acetyltransferase A complex subunit NAT1, ...
Authors:Neubauer, J.L, Immormino, R.M, Dollins, D.E, Endo-Streeter, S.T, Pemble IV, C.W, York, J.D.
Deposit date:2012-10-21
Release date:2014-03-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The Protein Complex NatA Binds Inositol Hexakisphosphate and Exhibits Conformational Flexibility
To be Published
3GW8
DownloadVisualize
BU of 3gw8 by Molmil
Crystal structure of phosphoglyceromutase from Burkholderia pseudomallei with vanadate and glycerol
Descriptor: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-31
Release date:2009-04-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:An ensemble of structures of Burkholderia pseudomallei 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
Acta Crystallogr.,Sect.F, 67, 2011
2FXE
DownloadVisualize
BU of 2fxe by Molmil
X-ray crystal structure of HIV-1 protease CRM mutant complexed with atazanavir (BMS-232632)
Descriptor: (3S,8S,9S,12S)-3,12-BIS(1,1-DIMETHYLETHYL)-8-HYDROXY-4,11-DIOXO-9-(PHENYLMETHYL)-6-[[4-(2-PYRIDINYL)PHENYL]METHYL]-2,5, 6,10,13-PENTAAZATETRADECANEDIOIC ACID DIMETHYL ESTER, ACETATE ION, ...
Authors:Sheriff, S, Klei, H.E.
Deposit date:2006-02-05
Release date:2007-02-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of human immunodeficiency virus type 1 protease mutants complexed with atazanavir.
J.Virol., 81, 2007
4JD2
DownloadVisualize
BU of 4jd2 by Molmil
Crystal structure of Bos taurus Arp2/3 complex binding with Mus musculus GMF
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-related protein 2, Actin-related protein 2/3 complex subunit 1B, ...
Authors:Nolen, B.J, Luan, Q.
Deposit date:2013-02-22
Release date:2013-07-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structural basis for regulation of Arp2/3 complex by GMF.
Nat.Struct.Mol.Biol., 20, 2013
3GP5
DownloadVisualize
BU of 3gp5 by Molmil
Crystal structure of phosphoglyceromutase from Burkholderia pseudomallei with 3-phosphoglyceric acid and vanadate
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, 3-PHOSPHOGLYCERIC ACID, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-20
Release date:2009-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:An ensemble of structures of Burkholderia pseudomallei 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
Acta Crystallogr.,Sect.F, 67, 2011
3RZA
DownloadVisualize
BU of 3rza by Molmil
Crystal structure of a tripeptidase (SAV1512) from staphylococcus aureus subsp. aureus mu50 at 2.10 A resolution
Descriptor: CALCIUM ION, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-05-11
Release date:2011-06-08
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a tripeptidase (SAV1512) from STAPHYLOCOCCUS AUREUS MU50 at 2.10 A resolution
To be published
3H9R
DownloadVisualize
BU of 3h9r by Molmil
Crystal structure of the kinase domain of type I activin receptor (ACVR1) in complex with FKBP12 and dorsomorphin
Descriptor: 6-[4-(2-piperidin-1-ylethoxy)phenyl]-3-pyridin-4-ylpyrazolo[1,5-a]pyrimidine, Activin receptor type-1, Peptidyl-prolyl cis-trans isomerase FKBP1A, ...
Authors:Chaikuad, A, Alfano, I, Shrestha, B, Muniz, J.R.C, Petrie, K, Fedorov, O, Phillips, C, Bishop, S, Mahajan, P, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2009-04-30
Release date:2009-06-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of the Bone Morphogenetic Protein Receptor ALK2 and Implications for Fibrodysplasia Ossificans Progressiva.
J.Biol.Chem., 287, 2012
4POV
DownloadVisualize
BU of 4pov by Molmil
ThiT with LMG135 bound
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophene-2-carbaldehyde, CHLORIDE ION, ...
Authors:Swier, L.J.Y.M, Guskov, A, Slotboom, D.J.
Deposit date:2014-02-26
Release date:2014-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Design of Potent Small-Molecule Binders to the S-Component of the ECF Transporter for Thiamine.
Chembiochem, 16, 2015
4F33
DownloadVisualize
BU of 4f33 by Molmil
Crystal Structure of therapeutic antibody MORAb-009
Descriptor: MORAb-009 FAB heavy chain, MORAb-009 FAB light chain, TETRAETHYLENE GLYCOL
Authors:Xia, D, Ma, J, Tang, W.K, Esser, L.
Deposit date:2012-05-08
Release date:2012-07-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Recognition of mesothelin by the therapeutic antibody MORAb-009: structural and mechanistic insights.
J.Biol.Chem., 287, 2012
4PQQ
DownloadVisualize
BU of 4pqq by Molmil
The crystal structure of discoidin domain from muskelin
Descriptor: Muskelin, PHOSPHATE ION, TETRAETHYLENE GLYCOL
Authors:Kim, K.-H, Hong, S.K, Kim, E.E.
Deposit date:2014-03-04
Release date:2014-11-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of mouse muskelin discoidin domain and biochemical characterization of its self-association.
Acta Crystallogr.,Sect.D, 70, 2014
4F9Y
DownloadVisualize
BU of 4f9y by Molmil
Human P38 alpha MAPK In Complex With a Novel and Selective Small Molecule Inhibitor
Descriptor: 4-[3-(4-FLUOROPHENYL)-1H-PYRAZOL-4-YL]PYRIDINE, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Grum-Tokars, V.L, Minasov, G, Anderson, W.F, Watterson, D.M.
Deposit date:2012-05-21
Release date:2013-06-05
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Development of Novel In Vivo Chemical Probes to Address CNS Protein Kinase Involvement in Synaptic Dysfunction.
Plos One, 8, 2013
4J6O
DownloadVisualize
BU of 4j6o by Molmil
Crystal Structure of the Phosphatase Domain of C. thermocellum (Bacterial) PnkP
Descriptor: CITRIC ACID, GLYCEROL, MANGANESE (II) ION, ...
Authors:Wang, L, Smith, P, Shuman, S.
Deposit date:2013-02-11
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and mechanism of the 2',3' phosphatase component of the bacterial Pnkp-Hen1 RNA repair system.
Nucleic Acids Res., 41, 2013
3MZ2
DownloadVisualize
BU of 3mz2 by Molmil
Crystal structure of a Glycerophosphoryl diester phosphodiesterase (BDI_3922) from Parabacteroides distasonis ATCC 8503 at 1.55 A resolution
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Glycerophosphoryl diester phosphodiesterase, SODIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-05-11
Release date:2010-07-07
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a Glycerophosphoryl diester phosphodiesterase (BDI_3922) from Parabacteroides distasonis ATCC 8503 at 1.55 A resolution
To be published
4I3Y
DownloadVisualize
BU of 4i3y by Molmil
Crystal structure of Staphylococcal inositol monophosphatase-1: 100 mM LiCl soaked inhibitory complex
Descriptor: GLYCEROL, Inositol monophosphatase family protein, MAGNESIUM ION, ...
Authors:Dutta, A, Bhattacharyya, S, Dutta, D, Das, A.K.
Deposit date:2012-11-26
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural elucidation of the binding site and mode of inhibition of Li(+) and Mg(2+) in inositol monophosphatase.
Febs J., 281, 2014
3EC5
DownloadVisualize
BU of 3ec5 by Molmil
The crystal structure of Thioflavin-T (ThT) binding OspA mutant
Descriptor: Outer Surface Protein A, TETRAETHYLENE GLYCOL
Authors:Biancalana, M, Makabe, K, Koide, A, Koide, S.
Deposit date:2008-08-28
Release date:2009-02-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular mechanism of thioflavin-T binding to the surface of beta-rich peptide self-assemblies
J.Mol.Biol., 385, 2009
4HYX
DownloadVisualize
BU of 4hyx by Molmil
Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-4 DMPC Bicelle
Descriptor: Bacteriorhodopsin, DECANE, GLYCEROL, ...
Authors:Lee, S, Stout, C.D, Zhang, Q.
Deposit date:2012-11-14
Release date:2013-03-20
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
4DQK
DownloadVisualize
BU of 4dqk by Molmil
Crystal structure of the FAD binding domain of cytochrome P450 BM3
Descriptor: Bifunctional P-450/NADPH-P450 reductase, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Joyce, M.G, Leys, D.
Deposit date:2012-02-16
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of the FAD/NADPH-binding domain of flavocytochrome P450 BM3.
Febs J., 279, 2012
4HX9
DownloadVisualize
BU of 4hx9 by Molmil
Designed Phosphodeoxyribosyltransferase
Descriptor: Nucleoside deoxyribosyltransferase, SULFATE ION, TETRAETHYLENE GLYCOL
Authors:Kaminski, P.A, Labesse, G.
Deposit date:2012-11-09
Release date:2013-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Phosphodeoxyribosyltransferases, designed enzymes for deoxyribonucleotides synthesis.
J.Biol.Chem., 288, 2013
3QT4
DownloadVisualize
BU of 3qt4 by Molmil
Structure of digestive procathepsin L 3 of Tenebrio molitor larval midgut
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Cathepsin-L-like midgut cysteine proteinase, PHOSPHATE ION, ...
Authors:Beton, D, Guzzo, C.R, Terra, W.R, Farah, C.S.
Deposit date:2011-02-22
Release date:2012-02-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The 3D structure and function of digestive cathepsin L-like proteinases of Tenebrio molitor larval midgut.
Insect Biochem.Mol.Biol., 42, 2012
2FXD
DownloadVisualize
BU of 2fxd by Molmil
X-ray crystal structure of HIV-1 protease IRM mutant complexed with atazanavir (BMS-232632)
Descriptor: (3S,8S,9S,12S)-3,12-BIS(1,1-DIMETHYLETHYL)-8-HYDROXY-4,11-DIOXO-9-(PHENYLMETHYL)-6-[[4-(2-PYRIDINYL)PHENYL]METHYL]-2,5, 6,10,13-PENTAAZATETRADECANEDIOIC ACID DIMETHYL ESTER, ACETATE ION, ...
Authors:Klei, H.E, Sheriff, S.
Deposit date:2006-02-04
Release date:2007-02-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystal structures of human immunodeficiency virus type 1 protease mutants complexed with atazanavir.
J.Virol., 81, 2007
4QUU
DownloadVisualize
BU of 4quu by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) complexed with Histone H4-K(ac)5
Descriptor: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, Histone H4, ...
Authors:Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2014-07-12
Release date:2014-07-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells.
J Mol Cell Biol, 8, 2016
3EI3
DownloadVisualize
BU of 3ei3 by Molmil
Structure of the hsDDB1-drDDB2 complex
Descriptor: DNA damage-binding protein 1, DNA damage-binding protein 2, TETRAETHYLENE GLYCOL
Authors:Scrima, A, Thoma, N.H.
Deposit date:2008-09-15
Release date:2009-01-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex.
Cell(Cambridge,Mass.), 135, 2008

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon