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7RH7
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Mycobacterial CIII2CIV2 supercomplex, Telacebec (Q203) bound
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Di Trani, J.M, Yanofsky, D.J, Rubinstein, J.L.
Deposit date:2021-07-16
Release date:2021-08-04
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of mycobacterial CIII 2 CIV 2 respiratory supercomplex bound to the tuberculosis drug candidate telacebec (Q203).
Elife, 10, 2021
3W9H
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Structural basis for the inhibition of bacterial multidrug exporters
Descriptor: Acriflavine resistance protein B, [{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate
Authors:Sakurai, K, Nagata, C, Nakashima, R, Yamaguchi, A.
Deposit date:2013-04-04
Release date:2013-07-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structural basis for the inhibition of bacterial multidrug exporters
Nature, 500, 2013
3R94
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BU of 3r94 by Molmil
AKR1C3 complex with flurbiprofen
Descriptor: (2R)-2-(3-fluoro-4-phenyl-phenyl)propanoic acid, 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C3, ...
Authors:Yosaatmadja, Y, Teague, R.M, Flanagan, J.U, Squire, C.J.
Deposit date:2011-03-24
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.013 Å)
Cite:Crystal structures of three classes of non-steroidal anti-inflammatory drugs in complex with aldo-keto reductase 1C3.
Plos One, 7, 2012
7RH5
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Mycobacterial CIII2CIV2 supercomplex, Inhibitor free
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Di Trani, J.M, Yanofsky, D.J, Rubinstein, J.L.
Deposit date:2021-07-16
Release date:2021-08-04
Last modified:2021-11-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of mycobacterial CIII 2 CIV 2 respiratory supercomplex bound to the tuberculosis drug candidate telacebec (Q203).
Elife, 10, 2021
3RDM
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BU of 3rdm by Molmil
Crystal structure of R7-2 streptavidin complexed with biotin/PEG
Descriptor: BIOTIN, PENTAETHYLENE GLYCOL, Streptavidin
Authors:Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3RDU
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BU of 3rdu by Molmil
Crystal structure of R7-2 streptavidin complexed with PEG
Descriptor: GLYCEROL, PENTAETHYLENE GLYCOL, Streptavidin
Authors:Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3WFD
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BU of 3wfd by Molmil
Reduced and acetaldoxime-bound cytochrome c-dependent nitric oxide reductase (cNOR) from Pseudomonas aeruginosa in complex with antibody fragment
Descriptor: (1E)-N-hydroxyethanimine, CALCIUM ION, FE (III) ION, ...
Authors:Sato, N, Ishii, S, Hino, T, Sugimoto, H, Fukumori, Y, Shiro, Y, Tosha, T.
Deposit date:2013-07-18
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of reduced and ligand-bound nitric oxide reductase provide insights into functional differences in respiratory enzymes.
Proteins, 82, 2014
3WG4
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Crystal structure of Agrocybe cylindracea galectin mutant (N46A) with blood type A antigen tetraose
Descriptor: DI(HYDROXYETHYL)ETHER, Galactoside-binding lectin, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R.
Deposit date:2013-07-25
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity.
Febs Lett., 587, 2013
7RNN
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Human ASIC1a-Nb.C1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, Nanobodies Nb.C1
Authors:Wu, Y, Chen, Z, Sigworth, F.J, Canessa, C.M.
Deposit date:2021-07-29
Release date:2021-08-11
Last modified:2021-08-25
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structure and analysis of nanobody binding to the human ASIC1a ion channel.
Elife, 10, 2021
3WGE
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BU of 3wge by Molmil
Crystal structure of ERp46 Trx2
Descriptor: GLYCEROL, Thioredoxin domain-containing protein 5
Authors:Inaba, K, Suzuki, M, Kojima, R.
Deposit date:2013-08-04
Release date:2014-06-25
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Radically different thioredoxin domain arrangement of ERp46, an efficient disulfide bond introducer of the mammalian PDI family
Structure, 22, 2014
3REQ
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BU of 3req by Molmil
METHYLMALONYL-COA MUTASE, SUBSTRATE-FREE STATE (POOR QUALITY STRUCTURE)
Descriptor: ADENOSINE, COBALAMIN, METHYLMALONYL-COA MUTASE
Authors:Evans, P.R, Mancia, F.
Deposit date:1997-12-04
Release date:1998-03-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism.
Structure, 6, 1998
3RGS
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BU of 3rgs by Molmil
Structural and kinetic analysis of the beef liver catalase with the ammonia as a ligand
Descriptor: AMMONIA, Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Purwar, N, Schmidt, M.
Deposit date:2011-04-08
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Interaction of nitric oxide with catalase: structural and kinetic analysis.
Biochemistry, 50, 2011
3RGP
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BU of 3rgp by Molmil
Structural and Kinetic Analysis of the Beef liver Catalase complexed with Nitric Oxide
Descriptor: Catalase, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Purwar, N, Schmidt, M.
Deposit date:2011-04-08
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Interaction of nitric oxide with catalase: structural and kinetic analysis.
Biochemistry, 50, 2011
3WH0
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BU of 3wh0 by Molmil
Structure of Pin1 Complex with 18-crown-6
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ...
Authors:Lee, C.C, Liu, C.I, Jeng, W.Y, Wang, A.H.J.
Deposit date:2013-08-20
Release date:2014-10-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crowning proteins: modulating the protein surface properties using crown ethers.
Angew.Chem.Int.Ed.Engl., 53, 2014
3RLF
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BU of 3rlf by Molmil
Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to MgAMPPNP
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, MAGNESIUM ION, Maltose transport system permease protein malF, ...
Authors:Oldham, M.L, Chen, J.
Deposit date:2011-04-19
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Snapshots of the maltose transporter during ATP hydrolysis.
Proc.Natl.Acad.Sci.USA, 108, 2011
3WIZ
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BU of 3wiz by Molmil
Crystal structure of Bcl-xL in complex with compound 10
Descriptor: 7-(4-{[(4-{[(2R)-4-(dimethylamino)-1-(phenylsulfanyl)butan-2-yl]amino}-3-nitrophenyl)sulfonyl]carbamoyl}-2-methylphenyl)-3-[3-(naphthalen-1-yloxy)propyl]pyrazolo[1,5-a]pyridine-2-carboxylic acid, Bcl-2-like protein 1, PHOSPHATE ION
Authors:Sogabe, S, Igaki, S, Hayano, Y.
Deposit date:2013-09-26
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Discovery of potent Mcl-1/Bcl-xL dual inhibitors by using a hybridization strategy based on structural analysis of target proteins.
J.Med.Chem., 56, 2013
3RN6
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BU of 3rn6 by Molmil
Crystal structure of Cytosine Deaminase from Escherichia Coli complexed with zinc and isoguanine
Descriptor: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, 6-amino-3,7-dihydro-2H-purin-2-one, Cytosine deaminase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:Rescue of the orphan enzyme isoguanine deaminase.
Biochemistry, 50, 2011
3WP4
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BU of 3wp4 by Molmil
The crystal structure of native CDBFV from Neocallimastix patriciarum
Descriptor: CDBFV, SULFATE ION
Authors:Cheng, Y.S, Chen, C.C, Huang, C.H, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural analysis of a glycoside hydrolase family 11 xylanase from Neocallimastix patriciarum: insights into the molecular basis of a thermophilic enzyme.
J.Biol.Chem., 289, 2014
3WN0
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BU of 3wn0 by Molmil
Crystal Structure of Streptomyces coelicolor alpha-L-arabinofuranosidase in complex with L-arabinose
Descriptor: CALCIUM ION, CHLORIDE ION, CITRIC ACID, ...
Authors:Fujimoto, Z, Maehara, T, Ichinose, H, Michikawa, M, Harazono, K, Kaneko, S.
Deposit date:2013-11-29
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and characterization of the glycoside hydrolase family 62 alpha-L-arabinofuranosidase from Streptomyces coelicolor
J.Biol.Chem., 289, 2014
3WYQ
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BU of 3wyq by Molmil
Crystal structure of the low-immunogenic core streptavidin mutant LISA-314 (Y22S/Y83S/R84K/E101D/R103K/E116N) at 1.0 A resolution
Descriptor: BIOTIN, GLYCEROL, SULFATE ION, ...
Authors:Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A.
Deposit date:2014-09-05
Release date:2014-12-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1 Å)
Cite:Crystal structure of streptavidin mutant with low immunogenicity.
J.Biosci.Bioeng., 119, 2015
3WZF
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Crystal structure of human cytoplasmic aspartate aminotransferase
Descriptor: Aspartate aminotransferase, cytoplasmic
Authors:Jiang, X, Chang, H, Zhou, Y, Chen, L, Yang, Q.
Deposit date:2014-09-24
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.991 Å)
Cite:Recombinant expression, purification and Preliminary crystallographic studies of human cytoplasmic aspartate aminotransferase
To be Published
3QM0
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BU of 3qm0 by Molmil
Crystal structure of RTT109-AC-CoA complex
Descriptor: ACETYL COENZYME *A, Histone acetyltransferase RTT109, MERCURY (II) ION
Authors:Tang, Y, Marmorstein, R.
Deposit date:2011-02-03
Release date:2011-02-16
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Fungal Rtt109 histone acetyltransferase is an unexpected structural homolog of metazoan p300/CBP.
Nat.Struct.Mol.Biol., 15, 2008
3QRF
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BU of 3qrf by Molmil
Structure of a domain-swapped FOXP3 dimer
Descriptor: Forkhead box protein P3, MAGNESIUM ION, Nuclear factor of activated T-cells, ...
Authors:Bandukwala, H.S, Wu, Y, Feurer, M, Chen, Y, Barbosa, B, Ghosh, S, Stroud, J.C, Benoist, C, Mathis, D, Rao, A, Chen, L.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a Domain-Swapped FOXP3 Dimer on DNA and Its Function in Regulatory T Cells.
Immunity, 34, 2011
3WYP
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BU of 3wyp by Molmil
Crystal structure of wild-type core streptavidin in complex with D-biotin/biotin-D-sulfoxide at 1.3 A resolution
Descriptor: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
Authors:Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A.
Deposit date:2014-09-05
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of streptavidin mutant with low immunogenicity.
J.Biosci.Bioeng., 119, 2015
3WZN
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Crystal structure of the core streptavidin mutant V21 (Y22S/N23D/S27D/Y83S/R84K/E101D/R103K/E116N) complexed with biotin at 1.3 A resolution
Descriptor: BIOTIN, SULFATE ION, Streptavidin
Authors:Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Tsumoto, K, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
Deposit date:2014-10-01
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure-based design of a streptavidin mutant specific for an artificial biotin analogue.
J.Biochem., 157, 2015

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