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9BE1
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BU of 9be1 by Molmil
CG-centric NF-kappaB RelA binding DNA
Descriptor: ACETATE ION, DNA (5'-D(*CP*GP*GP*GP*AP*AP*TP*TP*TP*CP*CP*GP*CP*GP*GP*AP*AP*AP*TP*TP*CP*CP*CP*G)-3'), ZINC ION
Authors:Biswas, T, Shahabi, S, Tsodikov, O.V, Wang, V, Ghosh, G.
Deposit date:2024-04-13
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
9CPD
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BU of 9cpd by Molmil
Structures of small molecules bound to RNA repeat expansions that cause Huntington's disease-like 2 and myotonic dystrophy type 1
Descriptor: 4-[(3-methoxyphenyl)amino]-2-methylquinoline-6-carboximidamide, RNA (5'-R(*GP*AP*CP*AP*GP*CP*UP*GP*CP*UP*GP*UP*C)-3')
Authors:Chen, J.L, Taghavi, A, Disney, M.D, Fountain, M.A, Childs-Disney, J.L.
Deposit date:2024-07-18
Release date:2024-08-07
Last modified:2024-08-14
Method:SOLUTION NMR
Cite:NMR structures of small molecules bound to a model of a CUG RNA repeat expansion.
Bioorg.Med.Chem.Lett., 111, 2024
2LRA
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BU of 2lra by Molmil
NMR Structure of Signal Sequence Deleted (SSD) Rv0603 Protein from Mycobacterium tuberculosis without N-terminal His-tag
Descriptor: POSSIBLE EXPORTED PROTEIN
Authors:Tripathi, S, Pulavarti, S, Yadav, R, Jain, A, Pathak, P, Meher, A, Arora, A.
Deposit date:2012-03-28
Release date:2013-05-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Signal Sequence Deleted (SSD) Rv0603 Protein from Mycobacterium tuberculosis without N-terminal His-tag
To be Published
2LHH
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BU of 2lhh by Molmil
Solution structure of Ca2+-bound yCaM
Descriptor: CALCIUM ION, Calmodulin
Authors:Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
Deposit date:2011-08-10
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
2LFE
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BU of 2lfe by Molmil
Solution NMR structure of N-terminal domain of human E3 ubiquitin-protein ligase HECW2, Northeast structural genomics consortium (NESG) target ht6306A
Descriptor: E3 ubiquitin-protein ligase HECW2
Authors:Lemak, A, Yee, A, Houliston, S, Garcia, M, Chitayat, S, Dhe-Paganon, S, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC)
Deposit date:2011-06-29
Release date:2011-07-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution structure of N-terminal domain of E3 ligase HECW2
To be Published
2LI5
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BU of 2li5 by Molmil
NMR structure of Atg8-Atg7C30 complex
Descriptor: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7
Authors:Kumeta, H, Satoo, K, Noda, N.N, Fujioka, Y, Ogura, K, Nakatogawa, H, Ohsumi, Y, Inagaki, F.
Deposit date:2011-08-23
Release date:2011-11-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of Atg8 activation by a homodimeric E1, Atg7.
Mol.Cell, 44, 2011
2LNS
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BU of 2lns by Molmil
Solution structure of AGR2 residues 41-175
Descriptor: Anterior gradient protein 2 homolog
Authors:Patel, P, Clarke, C.J, Barraclough, D.L, Rudland, P.S, Barraclough, R, Lian, L.
Deposit date:2012-01-04
Release date:2013-01-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Metastasis-promoting anterior gradient 2 protein has a dimeric thioredoxin fold structure and a role in cell adhesion.
J.Mol.Biol., 425, 2013
9F6J
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BU of 9f6j by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Polymerase Arrest state)
Descriptor: DNA nascent strand, DNA polymerase epsilon catalytic subunit A, DNA template strand, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
2LOP
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BU of 2lop by Molmil
Backbone structure of human membrane protein TMEM14A
Descriptor: Transmembrane protein 14A
Authors:Eichmann, C, Klammt, C, Maslennikov, I, Kwiatkowski, W, Riek, R, Choe, S.
Deposit date:2012-01-26
Release date:2012-05-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Facile backbone structure determination of human membrane proteins by NMR spectroscopy.
Nat.Methods, 9, 2012
2AKA
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BU of 2aka by Molmil
Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
Descriptor: Dynamin-1, LINKER, myosin II heavy chain
Authors:Reubold, T.F, Eschenburg, S, Becker, A, Leonard, M, Schmid, S.L, Vallee, R.B, Kull, F.J, Manstein, D.J.
Deposit date:2005-08-03
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the GTPase domain of rat dynamin 1.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2LSR
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BU of 2lsr by Molmil
Solution structure of harmonin N terminal domain in complex with a exon68 encoded peptide of cadherin23
Descriptor: Harmonin, peptide from Cadherin-23
Authors:Pan, L, Wu, L, Zhang, C, Zhang, M.
Deposit date:2012-05-04
Release date:2012-08-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Large protein assemblies formed by multivalent interactions between cadherin23 and harmonin suggest a stable anchorage structure at the tip link of stereocilia.
J.Biol.Chem., 287, 2012
2LOU
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BU of 2lou by Molmil
AR55 solubilised in DPC micelles
Descriptor: Apelin receptor
Authors:Langelaan, D.N, Rainey, J.K.
Deposit date:2012-01-27
Release date:2013-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural features of the apelin receptor N-terminal tail and first transmembrane segment implicated in ligand binding and receptor trafficking.
Biochim.Biophys.Acta, 1828, 2013
9B8O
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BU of 9b8o by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, Vo
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
2L8N
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BU of 2l8n by Molmil
NMR structure of the cytidine repressor DNA binding domain in presence of operator half-site DNA
Descriptor: Transcriptional repressor CytR
Authors:Moody, C.L, Tretyachenko-Ladokhina, V, Senear, D.F, Cocco, M.J.
Deposit date:2011-01-20
Release date:2011-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Multiple Conformations of the Cytidine Repressor DNA-Binding Domain Coalesce to One upon Recognition of a Specific DNA Surface.
Biochemistry, 50, 2011
2KZS
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BU of 2kzs by Molmil
DAXX helical bundle (DHB) domain
Descriptor: Death-associated protein 6
Authors:Escobar-Cabrera, E, Lau, D.K.W, Giovinazzi, S, Ishov, A.M, McIntosh, L.P.
Deposit date:2010-06-23
Release date:2010-12-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of the DAXX N-Terminal Helical Bundle Domain and Its Complex with Rassf1C.
Structure, 18, 2010
2LM9
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BU of 2lm9 by Molmil
The NMR structure of a major allergen from dust mite
Descriptor: Blo t 21 allergen
Authors:Tan, K.W, Mok, Y.K.
Deposit date:2011-11-29
Release date:2012-08-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure and IgE epitopes of Blo t 21, a major dust mite allergen from Blomia tropicalis
J.Biol.Chem., 2012
9F6L
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BU of 9f6l by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Mismatch Excision state)
Descriptor: CALCIUM ION, DNA nascent strand, DNA polymerase epsilon catalytic subunit A, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
9F6K
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BU of 9f6k by Molmil
Human DNA Polymerase epsilon bound to T-C mismatched DNA (Frayed Substrate state)
Descriptor: DNA nascent strand, DNA polymerase epsilon catalytic subunit A, DNA template strand, ...
Authors:Roske, J.J, Yeeles, J.T.P.
Deposit date:2024-05-01
Release date:2024-08-07
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural basis for processive daughter-strand synthesis and proofreading by the human leading-strand DNA polymerase Pol epsilon.
Nat.Struct.Mol.Biol., 2024
2L7Z
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BU of 2l7z by Molmil
NMR Structure of A13 homedomain
Descriptor: Homeobox protein Hox-A13
Authors:Ames, J.
Deposit date:2010-12-27
Release date:2011-11-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for sequence specific DNA binding and protein dimerization of HOXA13.
Plos One, 6, 2011
8ZCM
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BU of 8zcm by Molmil
Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Immunoglobulin gamma-1 heavy chain, ...
Authors:Destan, E, DeMirci, H.
Deposit date:2024-04-30
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap
To Be Published
2LMT
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BU of 2lmt by Molmil
NMR structure of Androcam
Descriptor: CALCIUM ION, Calmodulin-related protein 97A
Authors:Joshi, M.K, Moran, S.T, Beckingham, K.M, Mackenzie, K.R.
Deposit date:2011-12-12
Release date:2012-08-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of androcam supports specialized interactions with myosin VI.
Proc.Natl.Acad.Sci.USA, 109, 2012
2LSM
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BU of 2lsm by Molmil
Solution structure of gpFI C-terminal domain
Descriptor: DNA-packaging protein FI
Authors:Popovic, A, Wu, B, Edwards, A.M, Davidson, A.R, Maxwell, K.L.
Deposit date:2012-05-02
Release date:2012-07-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and biochemical characterization of phage lambda FI protein (gpFI) reveals a novel mechanism of DNA packaging chaperone activity.
J.Biol.Chem., 287, 2012
2LOE
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BU of 2loe by Molmil
Structure of the Plasmodium 6-cysteine s48/45 Domain
Descriptor: 6-cysteine protein, putative
Authors:Cai, M, Arredondo, S.A, Clore, M.G, Miller, L.H, Takayama, Y, Macdonald, N.J, Enderson, E.D, Aravind, L.
Deposit date:2012-01-23
Release date:2012-04-18
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Plasmodium 6-cysteine s48/45 domain.
Proc.Natl.Acad.Sci.USA, 109, 2012
2L21
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BU of 2l21 by Molmil
chicken IGF2R domain 11
Descriptor: Cation-independent mannose-6-phosphate receptor
Authors:Williams, C, Hoppe, H, Strickland, M, Frago, S, Ellis, R.Z, Wattana-Amorn, P, Prince, S.N, Zaccheo, O.J, Forbes, B, Jones, E.Y, Rezgui, D.Z, Crump, M.P, Hassan, A.B.
Deposit date:2010-08-10
Release date:2012-02-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:CD loop dependency of the IGF2: M6P/IGF2 receptor binding interaction predates imprinting
To be Published
2LCJ
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BU of 2lcj by Molmil
Solution NMR structure of Pab PolII Intein
Descriptor: Pab polC intein
Authors:Jiajing, L, Mills, K.V, Albracht, C.D.
Deposit date:2011-04-29
Release date:2011-09-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural and Mutational Studies of a Hyperthermophilic Intein from DNA Polymerase II of Pyrococcus abyssi.
J.Biol.Chem., 286, 2011

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PDB entries from 2024-08-14

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