Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7CYL
DownloadVisualize
BU of 7cyl by Molmil
Crystal structure of Karyopherin-beta2 in complex with FUS PY-NLS(P525L)
Descriptor: RNA-binding protein FUS, Transportin-1
Authors:Yoshizawa, T, Chook, Y.M.
Deposit date:2020-09-03
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanism of karyopherin-beta 2 binding and nuclear import of ALS variants FUS(P525L) and FUS(R495X).
Sci Rep, 11, 2021
8K43
DownloadVisualize
BU of 8k43 by Molmil
In situ structure of RNA-dependent RNA polymerase in full BAV particles
Descriptor: RNA-directed RNA polymerase (Fragment), VP2
Authors:Li, Z, Cao, S.
Deposit date:2023-07-17
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of Banna virus in multiple states reveal stepwise detachment of viral spikes.
Nat Commun, 15, 2024
7F4G
DownloadVisualize
BU of 7f4g by Molmil
Structure of RPAP2-bound RNA polymerase II
Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ...
Authors:Chen, X, Qi, Y, Wang, X, Li, J, Zhao, D, Xu, Y.
Deposit date:2021-06-18
Release date:2021-07-07
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex.
Cell Rep, 39, 2022
6XWJ
DownloadVisualize
BU of 6xwj by Molmil
Constitutive decay element CDE2 from human 3'UTR
Descriptor: RNA (5'-R(*GP*GP*UP*GP*CP*CP*UP*AP*AP*UP*AP*UP*UP*UP*AP*GP*GP*CP*AP*CP*C)-3')
Authors:Schwalbe, H, Binas, O.
Deposit date:2020-01-23
Release date:2020-05-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the recognition of transiently structured AU-rich elements by Roquin.
Nucleic Acids Res., 48, 2020
5IZH
DownloadVisualize
BU of 5izh by Molmil
Lassa virus L protein cap-snatching endonuclease. apo form
Descriptor: RNA-directed RNA polymerase L
Authors:Reguera, J, Cusack, S.
Deposit date:2016-03-25
Release date:2016-06-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparative Structural and Functional Analysis of Bunyavirus and Arenavirus Cap-Snatching Endonucleases.
Plos Pathog., 12, 2016
7EF1
DownloadVisualize
BU of 7ef1 by Molmil
crystal structure of maize SHH2 SAWADEE domain in complex with and H3K9me1 peptide
Descriptor: HB transcription factor, Histone H3.2, ZINC ION
Authors:Wang, Y, Du, J.
Deposit date:2021-03-20
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7EF2
DownloadVisualize
BU of 7ef2 by Molmil
Crystal structure of maize SHH2 SAWADEE domain in complex with an H3K9me3 peptide
Descriptor: HB transcription factor, Histone H3.2, ZINC ION
Authors:Wang, Y, Du, J.
Deposit date:2021-03-20
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
7EF3
DownloadVisualize
BU of 7ef3 by Molmil
crystal structure of maize SHH2 SAWADEE domain in complex with H3K9me2 peptide
Descriptor: HB transcription factor, Histone H3.2, ZINC ION
Authors:Wang, Y, Du, J.
Deposit date:2021-03-20
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Recognition of H3K9me1 by maize RNA-directed DNA methylation factor SHH2.
J Integr Plant Biol, 63, 2021
5HZI
DownloadVisualize
BU of 5hzi by Molmil
Crystal structure of photoinhibitable Intersectin1 containing C450M mutant LOV2 domain
Descriptor: FLAVIN MONONUCLEOTIDE, Intersectin-1,NPH1-1,Intersectin-1
Authors:Tarnawski, M, Dagliyan, O, Chu, P.H, Shirvanyants, D, Dokholyan, N.V, Hahn, K.M, Schlichting, I.
Deposit date:2016-02-02
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineering extrinsic disorder to control protein activity in living cells.
Science, 354, 2016
5HZJ
DownloadVisualize
BU of 5hzj by Molmil
Crystal structure of photoinhibitable Intersectin1 containing wildtype LOV2 domain
Descriptor: FLAVIN MONONUCLEOTIDE, Intersectin-1,NPH1-1,Intersectin-1
Authors:Tarnawski, M, Dagliyan, O, Chu, P.H, Shirvanyants, D, Dokholyan, N.V, Hahn, K.M, Schlichting, I.
Deposit date:2016-02-02
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Engineering extrinsic disorder to control protein activity in living cells.
Science, 354, 2016
6CQC
DownloadVisualize
BU of 6cqc by Molmil
RNase P protein from Thermotoga maritima in complex with 1-(4-Fluorophenyl)-2-thiourea
Descriptor: 1-(4-fluorophenyl)thiourea, Ribonuclease P protein component, SULFATE ION
Authors:Torres-Larios, A, Madrigal-Carrillo, E.A.
Deposit date:2018-03-14
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Discovery of novel RNase P inhibitors via an activity-binding-structure pipeline
To Be Published
6R1I
DownloadVisualize
BU of 6r1i by Molmil
Structure of porcine Aichi virus polymerase
Descriptor: Genome polyprotein
Authors:Dubankova, A, Boura, E.
Deposit date:2019-03-14
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.634 Å)
Cite:Structures of kobuviral and siciniviral polymerases reveal conserved mechanism of picornaviral polymerase activation.
J.Struct.Biol., 208, 2019
8KI7
DownloadVisualize
BU of 8ki7 by Molmil
Structure of Tomato spotted wilt virus L protein contained endoH domain binding to 3'5'vRNA
Descriptor: RNA (5'-R(P*AP*CP*CP*UP*GP*AP*UP*UP*GP*CP*UP*CP*U)-3'), RNA (5'-R(P*AP*GP*AP*GP*CP*AP*AP*UP*CP*A)-3'), RNA (5'-R(P*GP*CP*AP*AP*UP*CP*AP*GP*G)-3'), ...
Authors:Cao, L, Wang, X.
Deposit date:2023-08-23
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of Tomato spotted wilt virus L protein
To Be Published
2RSU
DownloadVisualize
BU of 2rsu by Molmil
Alternative structure of Ubiquitin
Descriptor: Ubiquitin
Authors:Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R.
Deposit date:2012-06-15
Release date:2013-03-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin
Biochemistry, 52, 2013
5X70
DownloadVisualize
BU of 5x70 by Molmil
Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*AP*A)-3'), mRNA capping enzyme P5
Authors:Nakamichi, Y, Higashiura, A, Nakagawa, A.
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of capping enzyme from Rice dwarf virus
To Be Published
7PX3
DownloadVisualize
BU of 7px3 by Molmil
Structure of U5 snRNP assembly and recycling factor TSSC4 in complex with BRR2 and Jab1 domain of PRPF8
Descriptor: Pre-mRNA-processing-splicing factor 8, Protein TSSC4, U5 small nuclear ribonucleoprotein 200 kDa helicase
Authors:Bergfort, A, Kuropka, B, Ilik, I.A, Freund, C, Aktas, T, Hilal, T, Weber, G, Wahl, M.C.
Deposit date:2021-10-07
Release date:2022-01-26
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:The intrinsically disordered TSSC4 protein acts as a helicase inhibitor, placeholder and multi-interaction coordinator during snRNP assembly and recycling.
Nucleic Acids Res., 50, 2022
7SCI
DownloadVisualize
BU of 7sci by Molmil
AM0627 metallopeptidase from Akkermansia muciniphila
Descriptor: CHLORIDE ION, FORMIC ACID, Peptidase M60 domain-containing protein, ...
Authors:Fernandez, D, Bertozzi, C.R, Shon, D.J.
Deposit date:2021-09-28
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided mutagenesis of a mucin-selective metalloprotease from Akkermansia muciniphila alters substrate preferences.
J.Biol.Chem., 298, 2022
8KI8
DownloadVisualize
BU of 8ki8 by Molmil
structure of Tomato spotted wilt virus L protein binding to 5'vRNA
Descriptor: RNA (5'-R(P*AP*GP*AP*GP*CP*AP*AP*UP*CP*A)-3'), RNA-directed RNA polymerase L
Authors:Cao, L, Wang, X.
Deposit date:2023-08-23
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:structure of Tomato spotted wilt virus L protein
To Be Published
5YVH
DownloadVisualize
BU of 5yvh by Molmil
Crystal structure of Karyopherin beta2 in complex with FUS(371-526)
Descriptor: RNA-binding protein FUS, Transportin-1
Authors:Yoshizawa, T, Fung, H.Y.J, Chook, Y.M.
Deposit date:2017-11-25
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Nuclear Import Receptor Inhibits Phase Separation of FUS through Binding to Multiple Sites.
Cell, 173, 2018
8PTX
DownloadVisualize
BU of 8ptx by Molmil
Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine
Descriptor: 5'-DEOXYADENOSINE, ACETYL COENZYME *A, Elongator complex protein 1, ...
Authors:Abbassi, N, Jaciuk, M, Lin, T.-Y, Glatt, S.
Deposit date:2023-07-16
Release date:2024-04-17
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Cryo-EM structures of the human Elongator complex at work.
Nat Commun, 15, 2024
2MXJ
DownloadVisualize
BU of 2mxj by Molmil
Structural features of a 3' splice site influenza A: 11-nt hairpin
Descriptor: RNA_(11-MER)
Authors:Turner, D.H, Kennedy, S.D, Chen, J.L.
Deposit date:2015-01-06
Release date:2015-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural features of a 3' splice site in influenza a.
Biochemistry, 54, 2015
6LAS
DownloadVisualize
BU of 6las by Molmil
the wildtype SAM-VI riboswitch bound to SAM
Descriptor: RNA (55-MER), S-ADENOSYLMETHIONINE, U1 small nuclear ribonucleoprotein A
Authors:Ren, A, Sun, A.
Deposit date:2019-11-13
Release date:2020-01-01
Method:X-RAY DIFFRACTION (2.708 Å)
Cite:SAM-VI riboswitch structure and signature for ligand discrimination.
Nat Commun, 10, 2019
3LRU
DownloadVisualize
BU of 3lru by Molmil
hPRP8 Non-Native Subdomain
Descriptor: Pre-mRNA-processing-splicing factor 8
Authors:Schellenberg, M.J, Ritchie, D.B, MacMillan, A.M.
Deposit date:2010-02-11
Release date:2010-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Context-dependent remodeling of structure in two large protein fragments.
J.Mol.Biol., 402, 2010
3V53
DownloadVisualize
BU of 3v53 by Molmil
Crystal structure of human RBM25
Descriptor: RNA-binding protein 25
Authors:Gong, D.S.
Deposit date:2011-12-16
Release date:2012-12-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and functional characterization of the human RBM25 PWI domain and its flanking basic region
Biochem.J., 450, 2013
2MXK
DownloadVisualize
BU of 2mxk by Molmil
Structural features of a 3' splice site influenza A: 19-nt duplex
Descriptor: RNA (5'-R(*GP*CP*AP*GP*GP*CP*CP*CP*A)-3'), RNA (5'-R(*UP*GP*GP*GP*AP*GP*UP*GP*CP*A)-3')
Authors:Turner, D.H, Kennedy, S.D, Chen, J.L.
Deposit date:2015-01-06
Release date:2015-05-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural features of a 3' splice site in influenza a.
Biochemistry, 54, 2015

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon