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2HYP
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BU of 2hyp by Molmil
Crystal structure of Rv0805 D66A mutant
Descriptor: BROMIDE ION, CACODYLATE ION, FE (III) ION, ...
Authors:Shenoy, A.R, Capuder, M, Draskovic, P, Lamba, D, Visweswariah, S.S, Podobnik, M.
Deposit date:2006-08-07
Release date:2006-12-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Biochemical Analysis of the Rv0805 Cyclic Nucleotide Phosphodiesterase from Mycobacterium tuberculosis.
J.Mol.Biol., 365, 2007
1ZXE
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BU of 1zxe by Molmil
Crystal Structure of eIF2alpha Protein Kinase GCN2: D835N Inactivating Mutant in Apo Form
Descriptor: GLYCEROL, Serine/threonine-protein kinase
Authors:Padyana, A.K, Qiu, H, Roll-Mecak, A, Hinnebusch, A.G, Burley, S.K.
Deposit date:2005-06-07
Release date:2005-06-21
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Autoinhibition and Mutational Activation of Eukaryotic Initiation Factor 2{alpha} Protein Kinase GCN2
J.Biol.Chem., 280, 2005
6UH5
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BU of 6uh5 by Molmil
Structural basis of COMPASS eCM recognition of the H2Bub nucleosome
Descriptor: Bre2, DNA (146-MER), H3 N-terminus, ...
Authors:Hsu, P.L, Shi, H, Zheng, N.
Deposit date:2019-09-26
Release date:2019-11-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Basis of H2B Ubiquitination-Dependent H3K4 Methylation by COMPASS.
Mol.Cell, 76, 2019
5WH6
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BU of 5wh6 by Molmil
Crystal structure of PDE4D2 in complex with inhibitor (S_Zl-n-91)
Descriptor: 1-[4-(difluoromethoxy)-3-{[(3S)-oxolan-3-yl]oxy}phenyl]-3-methylbutan-1-one, MAGNESIUM ION, ZINC ION, ...
Authors:Ke, H, Wang, H.
Deposit date:2017-07-14
Release date:2018-07-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of a PDE4-Specific Pocket for the Design of Selective Inhibitors.
Biochemistry, 57, 2018
1Y2K
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BU of 1y2k by Molmil
Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1-(3-nitro-phenyl)-1H-pyrazole-4-carboxylic acid ethyl ester
Descriptor: 1,2-ETHANEDIOL, 3,5-DIMETHYL-1-(3-NITROPHENYL)-1H-PYRAZOLE-4-CARBOXYLIC ACID ETHYL ESTER, MAGNESIUM ION, ...
Authors:Card, G.L, Blasdel, L, England, B.P, Zhang, C, Suzuki, Y, Gillette, S, Fong, D, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-11-22
Release date:2005-03-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A family of phosphodiesterase inhibitors discovered by cocrystallography and scaffold-based drug design
Nat.Biotechnol., 23, 2005
1JKK
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BU of 1jkk by Molmil
2.4A X-RAY STRUCTURE OF TERNARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATP ANALOGUE AND MG.
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Tereshko, V, Teplova, M, Brunzelle, J, Watterson, D.M, Egli, M.
Deposit date:2001-07-12
Release date:2002-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the catalytic domain of human protein kinase associated with apoptosis and tumor suppression.
Nat.Struct.Biol., 8, 2001
1OHA
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BU of 1oha by Molmil
Acetylglutamate kinase from Escherichia coli complexed with MgADP and N-acetyl-L-glutamate
Descriptor: ACETATE ION, ACETYLGLUTAMATE KINASE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Gil-Ortiz, F, Ramon-Maiques, S, Fita, I, Rubio, V.
Deposit date:2003-05-23
Release date:2003-07-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
J.Mol.Biol., 331, 2003
1JOL
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BU of 1jol by Molmil
THE CRYSTAL STRUCTURE OF THE BINARY COMPLEX BETWEEN FOLINIC ACID (LEUCOVORIN) AND E. COLI DIHYDROFOLATE REDUCTASE
Descriptor: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Lee, H, Reyes, V.M, Kraut, J.
Deposit date:1996-02-25
Release date:1996-11-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structures of Escherichia coli dihydrofolate reductase complexed with 5-formyltetrahydrofolate (folinic acid) in two space groups: evidence for enolization of pteridine O4.
Biochemistry, 35, 1996
1JOM
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BU of 1jom by Molmil
THE CRYSTAL STRUCTURE OF THE BINARY COMPLEX BETWEEN FOLINIC ACID (LEUCOVORIN) AND E. COLI DIHYDROFOLATE REDUCTASE
Descriptor: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Reyes, V.M, Lee, H, Kraut, J.
Deposit date:1996-02-25
Release date:1996-11-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Escherichia coli dihydrofolate reductase complexed with 5-formyltetrahydrofolate (folinic acid) in two space groups: evidence for enolization of pteridine O4.
Biochemistry, 35, 1996
2HYO
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BU of 2hyo by Molmil
Crystal structure of Rv0805 N97A mutant
Descriptor: FE (III) ION, MANGANESE (II) ION, Rv0805N97A
Authors:Shenoy, A.R, Capuder, M, Draskovic, P, Lamba, D, Visweswariah, S.S, Podobnik, M.
Deposit date:2006-08-07
Release date:2006-12-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and Biochemical Analysis of the Rv0805 Cyclic Nucleotide Phosphodiesterase from Mycobacterium tuberculosis.
J.Mol.Biol., 365, 2007
4KH6
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BU of 4kh6 by Molmil
Toxoplasma gondii NTPDase1 C258S/C268S E493G crystallized with Mg and AMPNP
Descriptor: 5'-O-[(R)-hydroxy(phosphonoamino)phosphoryl]adenosine, MAGNESIUM ION, Nucleoside-triphosphatase 2
Authors:Krug, U, Totzauer, R, Strater, N.
Deposit date:2013-04-30
Release date:2013-11-06
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The ATP/ADP substrate specificity switch between Toxoplasma gondii NTPDase1 and NTPDase3 is caused by an altered mode of binding of the substrate base.
Chembiochem, 14, 2013
2HXF
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BU of 2hxf by Molmil
KIF1A head-microtubule complex structure in amppnp-form
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Kinesin-like protein KIF1A, ...
Authors:Kikkawa, M, Hirokawa, N.
Deposit date:2006-08-03
Release date:2006-10-10
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (10 Å)
Cite:High-resolution cryo-EM maps show the nucleotide binding pocket of KIF1A in open and closed conformations
Embo J., 25, 2006
1ZYD
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BU of 1zyd by Molmil
Crystal Structure of eIF2alpha Protein Kinase GCN2: Wild-Type Complexed with ATP.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Serine/threonine-protein kinase GCN2
Authors:Padyana, A.K, Qiu, H, Roll-Mecak, A, Hinnebusch, A.G, Burley, S.K.
Deposit date:2005-06-09
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural Basis for Autoinhibition and Mutational Activation of Eukaryotic Initiation Factor 2{alpha} Protein Kinase GCN2
J.Biol.Chem., 280, 2005
2KN5
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BU of 2kn5 by Molmil
A Correspondence Between Solution-State Dynamics of an Individual Protein and the Sequence and Conformational Diversity of its Family
Descriptor: Ubiquitin
Authors:Friedland, G.D.
Deposit date:2009-08-14
Release date:2009-11-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A correspondence between solution-state dynamics of an individual protein and the sequence and conformational diversity of its family.
PLOS COMPUT.BIOL., 5, 2009
4MMO
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BU of 4mmo by Molmil
The crystal structure of a M20 family metallo-carboxypeptidase Sso-CP2 from Sulfolobus solfataricus
Descriptor: GLYCEROL, SULFATE ION, Sso-CP2 metallo-carboxypetidase, ...
Authors:Dupuy, J, Dutoit, R, Durisotti, V, Demarez, M, Borel, F, Van Elder, D, Legrain, C, Bauvois, C.
Deposit date:2013-09-09
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3363 Å)
Cite:Biochemical characterization of a novel thermostable dinuclear carboxypeptidase from the thermoacidophilic archaeum Sulfolobus solfataricus.
To be Published
1IRA
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BU of 1ira by Molmil
COMPLEX OF THE INTERLEUKIN-1 RECEPTOR WITH THE INTERLEUKIN-1 RECEPTOR ANTAGONIST (IL1RA)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, INTERLEUKIN-1 RECEPTOR, INTERLEUKIN-1 RECEPTOR ANTAGONIST
Authors:Schreuder, H.A, Tardif, C, Tramp-Kalmeyer, S, Soffientini, A, Sarubbi, E, Akeson, A, Bowlin, T, Yanofsky, S, Barrett, R.W.
Deposit date:1998-04-09
Release date:1998-06-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A new cytokine-receptor binding mode revealed by the crystal structure of the IL-1 receptor with an antagonist.
Nature, 386, 1997
1J1C
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BU of 1j1c by Molmil
Binary complex structure of human tau protein kinase I with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glycogen synthase kinase-3 beta, MAGNESIUM ION
Authors:Aoki, M, Yokota, T, Sugiura, I, Sasaki, C, Hasegawa, T, Okumura, C, Kohno, T, Sugio, S, Matsuzaki, T.
Deposit date:2002-12-03
Release date:2003-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into nucleotide recognition in tau-protein kinase I/glycogen synthase kinase 3 beta.
Acta Crystallogr.,Sect.D, 60, 2004
1QGZ
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BU of 1qgz by Molmil
FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 78 REPLACED BY ASP (L78D)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (FERREDOXIN:NADP+ REDUCTASE), SULFATE ION
Authors:Hermoso, J.A, Mayoral, T, Medina, M, Sanz-Aparicio, J, Gomez-Moreno, C.
Deposit date:1999-05-10
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Role of a cluster of hydrophobic residues near the FAD cofactor in Anabaena PCC 7119 ferredoxin-NADP+ reductase for optimal complex formation and electron transfer to ferredoxin.
J.Biol.Chem., 276, 2001
1QH0
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BU of 1qh0 by Molmil
FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 76 MUTATED BY ASP AND LEU 78 MUTATED BY ASP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTEIN (FERREDOXIN:NADP+ REDUCTASE), SULFATE ION
Authors:Hermoso, J.A, Mayoral, T, Medina, M, Martinez-Ripoll, M, Martinez-Julvez, M, Sanz-Aparicio, J, Gomez-Moreno, C.
Deposit date:1999-05-10
Release date:2002-02-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Role of a cluster of hydrophobic residues near the FAD cofactor in Anabaena PCC 7119 ferredoxin-NADP+ reductase for optimal complex formation and electron transfer to ferredoxin.
J.Biol.Chem., 276, 2001
3C1M
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BU of 3c1m by Molmil
Cyrstal Structure of threonine-sensitive aspartokinase from Methanococcus jannaschii with MgAMP-PNP and L-aspartate
Descriptor: ASPARTIC ACID, FORMIC ACID, MAGNESIUM ION, ...
Authors:Liu, X.
Deposit date:2008-01-23
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Structural Basis for Allosteric Inhibition of a Threonine-sensitive Aspartokinase.
J.Biol.Chem., 283, 2008
1QGY
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BU of 1qgy by Molmil
Ferredoxin:NADP+ reductase mutant with Lys 75 replaced by Glu (K75E)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP+ reductase, SULFATE ION
Authors:Hermoso, J.A, Mayoral, T, Medina, M, Martinez-Ripoll, M, Martinez-Julvez, M, Sanz-Aparicio, J, Gomez-Moreno, C.
Deposit date:1999-05-10
Release date:2004-03-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of interactions for complex formation between Ferredoxin-NADP+ reductase and its protein partners
Proteins, 59, 2005
3C3O
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BU of 3c3o by Molmil
ALIX Bro1-domain:CHMIP4A co-crystal structure
Descriptor: Charged multivesicular body protein 4a peptide, GLYCEROL, Programmed cell death 6-interacting protein
Authors:McCullough, J.B, Fisher, R.D, Whitby, F.G, Sundquist, W.I, Hill, C.P.
Deposit date:2008-01-28
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:ALIX-CHMP4 interactions in the human ESCRT pathway.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3C3R
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BU of 3c3r by Molmil
ALIX BRO1 CHMP4C complex
Descriptor: Charged multivesicular body protein 4c peptide, GLYCEROL, Programmed cell death 6-interacting protein
Authors:McCullough, J.B, Fisher, R.D, Whitby, F.G, Sundquist, W.I, Hill, C.P.
Deposit date:2008-01-28
Release date:2008-06-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:ALIX-CHMP4 interactions in the human ESCRT pathway.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CAY
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BU of 3cay by Molmil
Crystal structure of Lipopeptide Detergent (LPD-12)
Descriptor: DODECYL-BETA-D-MALTOSIDE, LPD-12
Authors:Ho, D.N, Pomroy, N.C, Cuesta-Seijo, J.A, Prive, G.G.
Deposit date:2008-02-20
Release date:2008-09-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of a self-assembling lipopeptide detergent at 1.20 A.
Proc.Natl.Acad.Sci.USA, 105, 2008
8F56
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BU of 8f56 by Molmil
Dimer of aminoglycoside efflux pump AcrD treated with gentamicin
Descriptor: Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-11
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023

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