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4ATQ
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BU of 4atq by Molmil
GABA-transaminase A1R958 in complex with external aldimine PLP-GABA adduct
Descriptor: 4-AMINOBUTYRATE TRANSAMINASE, GAMMA-AMINO-BUTANOIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Bruce, H, Tuan, A.N, Mangas Sanchez, J, Hart, S, Turkenburg, J.P, Grogan, G.
Deposit date:2012-05-09
Release date:2012-10-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structures of a Gamma-Aminobutyrate (Gaba) Transaminase from the S-Triazine-Degrading Organism Arthrobacter Aurescens Tc1 in Complex with Plp and with its External Aldimine Plp- Gaba Adduct.
Acta Crystallogr.,Sect.F, 68, 2012
1QV9
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BU of 1qv9 by Molmil
Coenzyme F420-dependent methylenetetrahydromethanopterin dehydrogenase (Mtd) from Methanopyrus kandleri: A methanogenic enzyme with an unusual quarternary structure
Descriptor: F420-dependent methylenetetrahydromethanopterin dehydrogenase, MAGNESIUM ION
Authors:Hagemeier, C.H, Shima, S, Thauer, R.K, Bourenkov, G, Bartunik, H.D, Ermler, U.
Deposit date:2003-08-27
Release date:2003-11-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Coenzyme F420-dependent methylenetetrahydromethanopterin dehydrogenase (Mtd) from Methanopyrus kandleri: a methanogenic enzyme with an unusual quarternary structure
J.Mol.Biol., 332, 2003
1QYB
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BU of 1qyb by Molmil
X-ray crystal structure of Desulfovibrio vulgaris rubrerythrin with zinc substituted into the [Fe(SCys)4] site and alternative diiron site structures
Descriptor: FE (III) ION, Rubrerythrin, SULFATE ION, ...
Authors:Jin, S, Kurtz, D.M, Liu, Z.J, Rose, J, Wang, B.C.
Deposit date:2003-09-10
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:X-ray Crystal Structure of Desulfovibrio vulgaris Rubrerythrin with Zinc Substituted into the [Fe(SCys)(4)] Site and Alternative Diiron Site Structures.
Biochemistry, 43, 2004
2HMA
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BU of 2hma by Molmil
The Crystal Structure of tRNA (5-Methylaminomethyl-2-Thiouridylate)-Methyltransferase TrmU from Streptococcus pneumoniae
Descriptor: MAGNESIUM ION, Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase, S-ADENOSYLMETHIONINE
Authors:Kim, Y, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-07-11
Release date:2006-08-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The Crystal Structure of tRNA (5-Methylaminomethyl-2-Thiouridylate)-Methyltransferase TrmU from Streptococcus pneumoniae
To be Published
1NJ0
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BU of 1nj0 by Molmil
NMR structure of a V3 (MN isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody
Descriptor: Exterior membrane glycoprotein(GP120)
Authors:Sharon, M, Kessler, N, Levy, R, Zolla-Pazner, S, Gorlach, M, Anglister, J.
Deposit date:2002-12-30
Release date:2003-02-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Alternative Conformations of HIV-1 V3 Loops Mimic beta Hairpins in Chemokines, Suggesting a Mechanism for Coreceptor Selectivity.
Structure, 11, 2003
7EHF
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BU of 7ehf by Molmil
Crystal structure of the aminoglycoside resistance methyltransferase NpmB1
Descriptor: 1,2-ETHANEDIOL, 16S rRNA methyltransferase, CHLORIDE ION, ...
Authors:Kawai, A, Doi, Y.
Deposit date:2021-03-29
Release date:2021-08-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Functional and Structural Characterization of Acquired 16S rRNA Methyltransferase NpmB1 Conferring Pan-Aminoglycoside Resistance.
Antimicrob.Agents Chemother., 65, 2021
1NCV
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BU of 1ncv by Molmil
DETERMINATION CC-CHEMOKINE MCP-3, NMR, 7 STRUCTURES
Descriptor: MONOCYTE CHEMOATTRACTANT PROTEIN 3
Authors:Meunier, S, Bernassau, J.M, Guillemot, J.C, Ferrara, P, Darbon, H.
Deposit date:1997-02-05
Release date:1997-10-15
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Determination of the three-dimensional structure of CC chemokine monocyte chemoattractant protein 3 by 1H two-dimensional NMR spectroscopy.
Biochemistry, 36, 1997
3SQE
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BU of 3sqe by Molmil
Crystal structure of prethrombin-2 mutant S195A in the alternative form
Descriptor: GLYCEROL, Thrombin light chain, heavy chain
Authors:Pozzi, N, Chen, Z, Di Cera, E.
Deposit date:2011-07-05
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of prethrombin-2 reveal alternative conformations under identical solution conditions and the mechanism of zymogen activation.
Biochemistry, 50, 2011
4LNS
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BU of 4lns by Molmil
Crystal structure of Asparagine synthetase A (AsnA) from Trypanosoma brucei
Descriptor: Asparagine synthetase a
Authors:Khan, S, Madhubala, R, Sharma, A.
Deposit date:2013-07-12
Release date:2014-03-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification and functional characterization of a novel bacterial type asparagine synthetase A: a tRNA synthetase paralog from Leishmania donovani.
J.Biol.Chem., 289, 2014
8S0M
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BU of 8s0m by Molmil
Crystal structure of the HKU1 receptor binding domain in complex with TMPRSS2 and the nanobody A01
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody A01, ...
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structural insights into TMPRSS2 maturation and HKU1 binding
To Be Published
8S0L
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BU of 8s0l by Molmil
Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Nanobody A07, ...
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into TMPRSS2 maturation and HKU1 binding
To Be Published
8S0N
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BU of 8s0n by Molmil
Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Descriptor: Transmembrane protease serine 2, nanobody A07
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into TMPRSS2 maturation and HKU1 binding
To Be Published
1NIZ
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BU of 1niz by Molmil
NMR structure of a V3 (MN isolate) peptide bound to 447-52D, a human HIV-1 neutralizing antibody
Descriptor: Exterior membrane glycoprotein(GP120)
Authors:Sharon, M, Kessler, N, Levy, R, Zolla-Pazner, S, Gorlach, M, Anglister, J.
Deposit date:2002-12-30
Release date:2003-02-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Alternative Conformations of HIV-1 V3 Loops Mimic beta Hairpins in Chemokines, Suggesting a Mechanism for Coreceptor Selectivity.
Structure, 11, 2003
5T4K
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BU of 5t4k by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: (4S)-5-fluoro-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid, HTH-type transcriptional regulatory protein GabR
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3QQR
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BU of 3qqr by Molmil
Crystal structure of Parasponia hemoglobin; Differential Heme Coordination is Linked to Quaternary Structure
Descriptor: 1,4-DIETHYLENE DIOXIDE, Non-legume hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kakar, S, Sturms, R, Savage, A, Nix, J.C, Dispirito, A, Hargrove, M.S.
Deposit date:2011-02-16
Release date:2011-04-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structures of Parasponia and Trema hemoglobins: differential heme coordination is linked to quaternary structure.
Biochemistry, 50, 2011
1CRI
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BU of 1cri by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
2VDV
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BU of 2vdv by Molmil
Structure of trm8, m7G methylation enzyme
Descriptor: S-ADENOSYLMETHIONINE, TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE
Authors:Leulliot, N, Chaillet, M, Durand, D, Ulryck, N, Blondeau, K, Van Tilbeurgh, H.
Deposit date:2007-10-11
Release date:2007-12-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Yeast tRNA M7G Methylation Complex.
Structure, 16, 2008
1CRG
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BU of 1crg by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
1CRJ
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BU of 1crj by Molmil
THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C
Descriptor: CYTOCHROME C, HEME C, SULFATE ION
Authors:Berghuis, A.M, Brayer, G.D.
Deposit date:1993-08-06
Release date:1994-01-31
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The role of a conserved internal water molecule and its associated hydrogen bond network in cytochrome c.
J.Mol.Biol., 236, 1994
5WT2
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BU of 5wt2 by Molmil
NifS from Helicobacter pylori
Descriptor: CHLORIDE ION, Cysteine desulfurase IscS, ISOPROPYL ALCOHOL, ...
Authors:Fujishiro, T, Takahashi, Y.
Deposit date:2016-12-09
Release date:2017-12-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 2019
5T4J
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BU of 5t4j by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: GAMMA-AMINO-BUTANOIC ACID, HTH-type transcriptional regulatory protein GabR, PYRIDOXAL-5'-PHOSPHATE
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5ZS9
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BU of 5zs9 by Molmil
SufS from Bacillus subtilis in the resting state
Descriptor: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-28
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
5T4L
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BU of 5t4l by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
Descriptor: (4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid, Aspartate aminotransferase
Authors:Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5ZST
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BU of 5zst by Molmil
NifS from Hydrogenimonas thermopile in a persulfurated form
Descriptor: Cysteine desulfurase
Authors:Nakamura, R, Fujishiro, T, Takahashi, Y.
Deposit date:2018-04-29
Release date:2019-05-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
4BLF
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BU of 4blf by Molmil
Variable internal flexibility characterizes the helical capsid formed by Agrobacterium VirE2 protein on single-stranded DNA.
Descriptor: SINGLE-STRAND DNA-BINDING PROTEIN
Authors:Bharat, T.A.M, Zbaida, D, Eisenstein, M, Frankenstein, Z, Mehlman, T, Weiner, L, Sorzano, C.O.S, Barak, Y, Albeck, S, Briggs, J.A.G, Wolf, S.G, Elbaum, M.
Deposit date:2013-05-02
Release date:2013-06-26
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (20 Å)
Cite:Variable Internal Flexibility Characterizes the Helical Capsid Formed by Agrobacterium Vire2 Protein on Single-Stranded DNA.
Structure, 21, 2013

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