PDB: 2243 resultsInfo pagesStatus searchChemie searchBIRD

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6TC3	Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Innis, C.A, Herrero del Valle, A. Deposit date: 2019-11-05 Release date: 2020-01-01 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Ornithine capture by a translating ribosome controls bacterial polyamine synthesis. Nat Microbiol, 5, 2020
7P2O	NMR solution structure of SUD-C domain of SARS-CoV-2 Descriptor: Non-structural protein 3 Authors: Gallo, A, Tsika, A.C, Fourkiotis, N.K, Spyroulias, G.A. Deposit date: 2021-07-06 Release date: 2022-07-20 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: NMR solution structure of SUD-C domain of SARS-CoV-2 To Be Published
6QJG	Crystal Structure of the third PDZ domain of PSD-95 protein D332P mutant: space group C121, structure 2 Descriptor: Disks large homolog 4 Authors: Camara-Artigas, A. Deposit date: 2019-01-24 Release date: 2019-04-17 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.003 Å) Cite: Conformational changes in the third PDZ domain of the neuronal postsynaptic density protein 95. Acta Crystallogr D Struct Biol, 75, 2019
6QJK	Crystal Structure of the third PDZ domain of PSD-95 protein D332G mutant: space group P43 Descriptor: Disks large homolog 4, GLYCEROL, SULFATE ION Authors: Camara-Artigas, A. Deposit date: 2019-01-24 Release date: 2019-04-17 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.046 Å) Cite: Conformational changes in the third PDZ domain of the neuronal postsynaptic density protein 95. Acta Crystallogr D Struct Biol, 75, 2019
6QJF	Crystal Structure of the third PDZ domain of PSD-95 protein D332P mutant: space group C121, structure 1 Descriptor: Disks large homolog 4 Authors: Camara-Artigas, A. Deposit date: 2019-01-24 Release date: 2019-04-17 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Conformational changes in the third PDZ domain of the neuronal postsynaptic density protein 95. Acta Crystallogr D Struct Biol, 75, 2019
6QJL	Crystal Structure of the third PDZ domain of PSD-95 protein D332G mutant: space group P21 Descriptor: Disks large homolog 4, GLYCEROL, SULFATE ION Authors: Camara-Artigas, A. Deposit date: 2019-01-24 Release date: 2019-04-17 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.043 Å) Cite: Conformational changes in the third PDZ domain of the neuronal postsynaptic density protein 95. Acta Crystallogr D Struct Biol, 75, 2019
7ZJV	Structure of human USPL1 in covalent complex with DeltaN-SUMO2/3-PA probe Descriptor: CHLORIDE ION, SUMO-specific isopeptidase USPL1, Small ubiquitin-related modifier 2, ... Authors: Zhao, Z, Gersch, M. Deposit date: 2022-04-12 Release date: 2023-09-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Native Semisynthesis of Isopeptide-Linked Substrates for Specificity Analysis of Deubiquitinases and Ubl Proteases. J.Am.Chem.Soc., 145, 2023
7ZJU	Structure of human USPL1 in covalent complex with SUMO3-2Br probe Descriptor: 2-bromanylethanamine, CALCIUM ION, CHLORIDE ION, ... Authors: Zhao, Z, Gersch, M. Deposit date: 2022-04-12 Release date: 2023-09-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Native Semisynthesis of Isopeptide-Linked Substrates for Specificity Analysis of Deubiquitinases and Ubl Proteases. J.Am.Chem.Soc., 145, 2023
1DYU	The active site base controls cofactor reactivity in Escherichia coli amine oxidase: X-ray crystallographic studies with mutational variants. Descriptor: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE Authors: Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E.V, McPherson, M.J. Deposit date: 2000-02-08 Release date: 2000-02-29 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.04 Å) Cite: The Active Site Base Controls Cofactor Reactivity in Escherichia Coli Amine Oxidase : X-Ray Crystallographicstudies with Mutational Variants Biochemistry, 38, 1999
1SPU	STRUCTURE OF OXIDOREDUCTASE Descriptor: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE Authors: Wilmot, C.M, Phillips, S.E.V. Deposit date: 1996-11-13 Release date: 1997-03-12 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2 Å) Cite: Catalytic mechanism of the quinoenzyme amine oxidase from Escherichia coli: exploring the reductive half-reaction. Biochemistry, 36, 1997
7CQY	Tetrathionate hydrolase from Acidithiobacillus ferrooxidans mutant - D325N Descriptor: SULFATE ION, Tetrathionate hydrolase Authors: Tamada, T, Hirano, Y. Deposit date: 2020-08-12 Release date: 2021-01-27 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.80035782 Å) Cite: Reaction mechanism of tetrathionate hydrolysis based on the crystal structure of tetrathionate hydrolase from Acidithiobacillus ferrooxidans. Protein Sci., 30, 2020
1XLQ	Crystal structure of reduced C73S putidaredoxin from Pseudomonas putida Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin Authors: Sevrioukova, I.F. Deposit date: 2004-09-30 Release date: 2005-10-04 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Redox-dependent Structural Reorganization in Putidaredoxin, a Vertebrate-type [2Fe-2S] Ferredoxin from Pseudomonas putida. J.Mol.Biol., 347, 2005
1XLN	Crystal structure of oxidized C73S/C85S putidaredoxin, a [2Fe-2S] ferredoxin from Pseudomonas putida Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin Authors: Sevrioukova, I.F. Deposit date: 2004-09-30 Release date: 2005-10-04 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Redox-dependent Structural Reorganization in Putidaredoxin, a Vertebrate-type [2Fe-2S] Ferredoxin from Pseudomonas putida. J.Mol.Biol., 347, 2005
1XLP	Structure of oxidized C73S putidaredoxin from Pseudomonas putida Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin Authors: Sevrioukova, I.F. Deposit date: 2004-09-30 Release date: 2005-10-04 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Redox-dependent structural reorganization in putidaredoxin, a vertebrate-type [2Fe-2S] ferredoxin from Pseudomonas putida. J.Mol.Biol., 347, 2005
1XLO	Structure of reduced C73S/C85S putidaredoxin, a [2Fe-2S] ferredoxin from Pseudomonas putida Descriptor: FE2/S2 (INORGANIC) CLUSTER, Putidaredoxin Authors: Sevrioukova, I.F. Deposit date: 2004-09-30 Release date: 2005-10-04 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Redox-dependent Structural Reorganization in Putidaredoxin, a Vertebrate-type [2Fe-2S] Ferredoxin from Pseudomonas putida. J.Mol.Biol., 347, 2005
1QAL	THE ACTIVE SITE BASE CONTROLS COFACTOR REACTIVITY IN ESCHERICHIA COLI AMINE OXIDASE : X-RAY CRYSTALLOGRAPHIC STUDIES WITH MUTATIONAL VARIANTS Descriptor: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE Authors: Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E, McPherson, M.J. Deposit date: 1999-03-19 Release date: 1999-08-24 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The active site base controls cofactor reactivity in Escherichia coli amine oxidase: x-ray crystallographic studies with mutational variants. Biochemistry, 38, 1999
1QAF	THE ACTIVE SITE BASE CONTROLS COFACTOR REACTIVITY IN ESCHERICHIA COLI AMINE OXIDASE : X-RAY CRYSTALLOGRAPHIC STUDIES WITH MUTATIONAL VARIANTS Descriptor: CALCIUM ION, COPPER (II) ION, GLYCEROL, ... Authors: Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E, McPherson, M.J. Deposit date: 1999-03-11 Release date: 1999-08-23 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The active site base controls cofactor reactivity in Escherichia coli amine oxidase: x-ray crystallographic studies with mutational variants. Biochemistry, 38, 1999
1QAK	THE ACTIVE SITE BASE CONTROLS COFACTOR REACTIVITY IN ESCHERICHIA COLI AMINE OXIDASE : X-RAY CRYSTALLOGRAPHIC STUDIES WITH MUTATIONAL VARIANTS Descriptor: CALCIUM ION, COPPER (II) ION, COPPER AMINE OXIDASE Authors: Murray, J.M, Wilmot, C.M, Saysell, C.G, Jaeger, J, Knowles, P.F, Phillips, S.E, McPherson, M.J. Deposit date: 1999-03-15 Release date: 1999-08-24 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2 Å) Cite: The active site base controls cofactor reactivity in Escherichia coli amine oxidase: x-ray crystallographic studies with mutational variants. Biochemistry, 38, 1999
4U6H	Vaccinia L1/M12B9-Fab complex Descriptor: Heavy chain of murine anti-vaccinia L1 IgG2a antibody M12B9, Light chain of murine anti-vaccinia L1 IgG2a antibody M12B9, Protein L1 Authors: Matho, M.H, Schlossman, A, Zajonc, D.M. Deposit date: 2014-07-29 Release date: 2014-08-06 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Potent neutralization of vaccinia virus by divergent murine antibodies targeting a common site of vulnerability in l1 protein. J.Virol., 88, 2014
5M6J	Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus Descriptor: Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE Authors: Ogata, H. Deposit date: 2016-10-25 Release date: 2017-12-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7. Sci Rep, 8, 2018
5M6K	Crystal structure of nitrophorin 7 E27V mutant from Rhodnius prolixus with imidazole Descriptor: IMIDAZOLE, Nitrophorin-7, PROTOPORPHYRIN IX CONTAINING FE Authors: Ogata, H. Deposit date: 2016-10-25 Release date: 2017-12-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7. Sci Rep, 8, 2018
1ISO	ISOCITRATE DEHYDROGENASE: STRUCTURE OF AN ENGINEERED NADP+--> NAD+ SPECIFICITY-REVERSAL MUTANT Descriptor: ISOCITRATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION Authors: Hurley, J.H. Deposit date: 1996-03-01 Release date: 1996-12-07 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Determinants of cofactor specificity in isocitrate dehydrogenase: structure of an engineered NADP+ --> NAD+ specificity-reversal mutant. Biochemistry, 35, 1996
5GUG	Crystal structure of inositol 1,4,5-trisphosphate receptor large cytosolic domain with inositol 1,4,5-trisphosphate Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Inositol 1,4,5-trisphosphate receptor type 1 Authors: Hamada, K, Miyatake, H, Terauchi, A, Mikoshiba, K. Deposit date: 2016-08-29 Release date: 2017-04-26 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (7.399 Å) Cite: IP3-mediated gating mechanism of the IP3 receptor revealed by mutagenesis and X-ray crystallography Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G2G	Crystal structure of ketosteroid isomerase containing M116K mutation in the equilenin-bound form Descriptor: EQUILENIN, STEROID DELTA-ISOMERASE Authors: Cha, H.J, Jeong, J.H. Deposit date: 2016-04-08 Release date: 2016-07-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.599 Å) Cite: Role of Conserved met112 Residue in the Catalytic Activity and Stability of Ketosteroid Isomerase. Biochim.Biophys.Acta, 1864, 2016
1RRB	THE RAS-BINDING DOMAIN OF RAF-1 FROM RAT, NMR, 1 STRUCTURE Descriptor: RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE Authors: Terada, T, Ito, Y, Shirouzu, M, Tateno, M, Hashimoto, K, Kigawa, T, Ebisuzaki, T, Takio, K, Shibata, T, Yokoyama, S, Smith, B.O, Laue, E.D, Cooper, J.A, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 1998-03-26 Release date: 1999-03-30 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Nuclear magnetic resonance and molecular dynamics studies on the interactions of the Ras-binding domain of Raf-1 with wild-type and mutant Ras proteins. J.Mol.Biol., 286, 1999

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