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8XF4
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BU of 8xf4 by Molmil
Structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with Bisucaberin bound
Descriptor: 1,12-bis(oxidanyl)-1,6,12,17-tetrazacyclodocosane-2,5,13,16-tetrone, FE (III) ION, Iron-hydroxamate ABC transporter substrate-binding protein FtsB
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2023-12-13
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes
Structure
8XF8
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BU of 8xf8 by Molmil
High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine B
Descriptor: 1,2-ETHANEDIOL, Ferrioxamine B, Iron-hydroxamate ABC transporter substrate-binding protein FtsB, ...
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2023-12-13
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes
Structure
6DN3
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BU of 6dn3 by Molmil
CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA
Descriptor: 7,8-dimethyl-2,4-dioxo-10-(3-phenylpropyl)-1,2,3,4-tetrahydrobenzo[g]pteridin-10-ium, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Vicens, Q, Mondragon, E, Reyes, F.E, Berman, J, Kaur, H, Kells, K, Wickens, P, Wilson, J, Gadwood, R, Schostarez, H, Suto, R.K, Coish, P, Blount, K.F, Batey, R.T.
Deposit date:2018-06-05
Release date:2018-09-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.
ACS Chem. Biol., 13, 2018
1Z26
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BU of 1z26 by Molmil
Structure of Pyrococcus furiosus Argonaute with bound tungstate
Descriptor: Argonaute, TUNGSTATE(VI)ION
Authors:Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
6D8N
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BU of 6d8n by Molmil
Group I self-splicing intron P4-P6 domain mutant G134A/U185AA
Descriptor: Group I self-splicing intron, MAGNESIUM ION
Authors:Shoffner, G.M.
Deposit date:2018-04-26
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.95427132 Å)
Cite:In Crystallo Selection to Establish New RNA Crystal Contacts.
Structure, 26, 2018
9FEJ
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BU of 9fej by Molmil
Structure of the RNA-dependent RNA polymerase P2 from the bacteriophage Phi8
Descriptor: CALCIUM ION, RNA-directed RNA polymerase
Authors:Latimer-Smith, M, Salgado, P.S, Forsyth, I, Makeyev, E, Poranen, M, Stuart, D.I, Grimes, J.M, El Omari, K.
Deposit date:2024-05-20
Release date:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the RNA-dependent RNA polymerase P2 from the bacteriophage Phi8
To Be Published
2E5S
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BU of 2e5s by Molmil
Solution structure of the zf-CCCHx2 domain of muscleblind-like 2, isoform 1 [Homo sapiens]
Descriptor: OTTHUMP00000018578, ZINC ION
Authors:Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-22
Release date:2007-06-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
4FTE
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BU of 4fte by Molmil
Crystal structure of the D75N mutant capsid of Flock House virus
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E.
Deposit date:2012-06-27
Release date:2012-08-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
to be published, 2012
1XV6
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BU of 1xv6 by Molmil
The solution structure of 2',5'-linked 3'-O-(2-methoxyethyl)-RNA hairpin
Descriptor: 5'-R(*(C2L)P*(G2L)P*(C2L)P*(G2L)P*(A2L)P*(A2L)P*(U2L)P*(U2L)P*(C2L)P*(G2L)P*(C2L)P*(G2L))-2'
Authors:Plevnik, M, Gdaniec, Z, Plavec, J.
Deposit date:2004-10-27
Release date:2005-04-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of a modified 2',5'-linked RNA hairpin involved in an equilibrium with duplex
Nucleic Acids Res., 33, 2005
8DWJ
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BU of 8dwj by Molmil
Primase of mutant bacteriophage T4 primosome with single strand DNA/RNA primer hybrid in primer exiting state
Descriptor: DNA (70-MER), DNA primase, RNA(5'-ppp-GCCGA-3'), ...
Authors:Feng, X, Li, H.
Deposit date:2022-08-01
Release date:2023-06-14
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of the T4 bacteriophage primosome assembly and primer synthesis.
Nat Commun, 14, 2023
6VF2
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BU of 6vf2 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mg2+ (960 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mg2+ (960 min)
To be published
6VF1
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BU of 6vf1 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mg2+ (120 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mg2+ (120 min)
To be published
6VF3
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BU of 6vf3 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.521 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
To be published
6VFA
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BU of 6vfa by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Ground State Ternary Complex, 50 mM Mn2+ (15 min)
To be published
6VFB
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BU of 6vfb by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (960 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Reaction State Ternary Complex, 50 mM Mn2+ (960 min)
To be published
6VF0
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BU of 6vf0 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Reaction State Ternary Complex, 50 mM Mg2+ (30 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Reaction State Ternary Complex, 50 mM Mg2+ (30 min)
To be published
6VF8
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BU of 6vf8 by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Pre-Catalytic Ternary Complex, 20 mM Ca2+ (120 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Pre-Catalytic Ternary Complex, 20 mM Ca2+ (120 min)
To be published
6VF4
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BU of 6vf4 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Reaction State Ternary Complex, 50 mM Mn2+ (30 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Reaction State Ternary Complex, 50 mM Mn2+ (30 min)
To be published
6VEZ
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BU of 6vez by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Pre-Catalytic Ternary Complex, 20 mM Ca2+ (60 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.875 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Pre-Catalytic Ternary Complex, 20 mM Ca2+ (60 min)
To be published
6VF6
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BU of 6vf6 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (960 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (960 min)
To be published
6VF5
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BU of 6vf5 by Molmil
DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (120 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:At Product State Ternary Complex, 50 mM Mn2+ (120 min)
To be published
6VF9
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BU of 6vf9 by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Ternary Complex, 50 mM Mg2+ (2160 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Ternary Complex, 50 mM Mg2+ (2160 min)
To be published
6VF7
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BU of 6vf7 by Molmil
DNA Polymerase Mu, 8-oxodGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.871 Å)
Cite:DNA Polymerase Mu, 8-oxodGTP:At Ground State Ternary Complex, 50 mM Mn2+ (15 min)
To be published
6VFC
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BU of 6vfc by Molmil
DNA Polymerase Mu, 8-oxorGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (2160 min)
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Jamsen, J.A, Wilson, S.H.
Deposit date:2020-01-03
Release date:2021-09-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:DNA Polymerase Mu, 8-oxorGTP:Ct Product State Ternary Complex, 50 mM Mn2+ (2160 min)
To be published
4NOI
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BU of 4noi by Molmil
2.17 Angstrom Crystal Structure of DNA-directed RNA Polymerase Subunit Alpha from Campylobacter jejuni.
Descriptor: CHLORIDE ION, DNA-directed RNA polymerase subunit alpha, IODIDE ION, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-11-19
Release date:2013-12-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:2.17 Angstrom Crystal Structure of DNA-directed RNA Polymerase Subunit Alpha from Campylobacter jejuni.
TO BE PUBLISHED

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