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6LOG
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BU of 6log by Molmil
Crystal structure of human CCL5-12AAA14 mutant
Descriptor: C-C motif chemokine 5
Authors:Chen, Y.C, Li, J.Y, Huang, C.H, Sue, S.C.
Deposit date:2020-01-05
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:N-terminal Backbone Pairing Shifts in CCL5- 12 AAA 14 Dimer Interface: Structural Significance of the FAY Sequence.
Int J Mol Sci, 21, 2020
6EXT
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BU of 6ext by Molmil
Crystal structure of the DNA binding domain of fission yeast Sap1
Descriptor: Switch-activating protein 1
Authors:Ekundayo, B, Joergensen, M, Schalch, T.
Deposit date:2017-11-09
Release date:2018-11-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the replication regulator Sap1 reveals functionally important interfaces.
Sci Rep, 8, 2018
7ALN
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BU of 7aln by Molmil
Cryo-EM structure of the divergent actomyosin complex from Plasmodium falciparum Myosin A in the Rigor state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-1, Jasplakinolide, ...
Authors:Robert-Paganin, J, Xu, X.-P, Swift, M.F, Auguin, D, Robblee, J.P, Lu, H, Fagnant, P.M, Krementsova, E.B, Trybus, K.M, Houdusse, A, Volkmann, N, Hanein, D.
Deposit date:2020-10-06
Release date:2021-04-28
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:The actomyosin interface contains an evolutionary conserved core and an ancillary interface involved in specificity.
Nat Commun, 12, 2021
6EXU
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BU of 6exu by Molmil
Crystal structure of the DNA binding domain of fission yeast Sap1
Descriptor: Switch-activating protein 1
Authors:Ekundayo, B, Joergensen, M, Schalch, T.
Deposit date:2017-11-09
Release date:2018-11-28
Method:X-RAY DIFFRACTION (1.409 Å)
Cite:Structure of the replication regulator Sap1 reveals functionally important interfaces.
Sci Rep, 8, 2018
7QG9
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BU of 7qg9 by Molmil
Tail tip of siphophage T5 : common core proteins
Descriptor: Distal tail protein, L-shaped tail fiber protein p132, Minor tail protein, ...
Authors:Linares, R, Arnaud, C.A, Effantin, G, Darnault, C, Epalle, N, Boeri Erba, E, Schoehn, G, Breyton, C.
Deposit date:2021-12-07
Release date:2022-12-21
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structural basis of bacteriophage T5 infection trigger and E. coli cell wall perforation.
Sci Adv, 9, 2023
3GVM
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BU of 3gvm by Molmil
Structure of the homodimeric WXG-100 family protein from Streptococcus agalactiae
Descriptor: Putative uncharacterized protein SAG1039
Authors:Poulsen, C, Gries, F, Wilmanns, M, Song, Y.H.
Deposit date:2009-03-31
Release date:2010-09-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:WXG100 protein superfamily consists of three subfamilies and exhibits an alpha-helical C-terminal conserved residue pattern.
Plos One, 9, 2014
4FP4
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BU of 4fp4 by Molmil
Crystal structure of isoprenoid synthase a3mx09 (target efi-501993) from pyrobaculum calidifontis
Descriptor: GERAN-8-YL GERAN, Polyprenyl synthetase, UNKNOWN ATOM OR ION, ...
Authors:Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-06-21
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F62
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BU of 4f62 by Molmil
Crystal structure of a putative farnesyl-diphosphate synthase from Marinomonas sp. MED121 (Target EFI-501980)
Descriptor: CHLORIDE ION, GLYCEROL, Geranyltranstransferase, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-05-14
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
1VHP
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BU of 1vhp by Molmil
VH-P8, NMR
Descriptor: VH-P8
Authors:Riechmann, L.
Deposit date:1996-04-16
Release date:1996-11-08
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Rearrangement of the former VL interface in the solution structure of a camelised, single antibody VH domain.
J.Mol.Biol., 259, 1996
5VSI
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BU of 5vsi by Molmil
CH1/Ckappa Fab mutant 15.1
Descriptor: 1,2-ETHANEDIOL, CH1/Ckappa Fab heavy chain, CH1/Ckappa Fab light chain, ...
Authors:Hendle, J.
Deposit date:2017-05-11
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Computational design of a specific heavy chain/ kappa light chain interface for expressing fully IgG bispecific antibodies.
Protein Sci., 26, 2017
7RTY
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BU of 7rty by Molmil
Crystal Structure of PsfC from Pseudomonas syringae PB-5123
Descriptor: FE (II) ION, PsfC
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2021-08-16
Release date:2021-09-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:Biosynthesis of fosfomycin in pseudomonads reveals an unexpected enzymatic activity in the metallohydrolase superfamily.
Proc.Natl.Acad.Sci.USA, 118, 2021
3HK5
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BU of 3hk5 by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Arabinarate
Descriptor: CARBONATE ION, CHLORIDE ION, D-arabinaric acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
3HK8
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BU of 3hk8 by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Arabinohydroxamate
Descriptor: CARBONATE ION, CHLORIDE ION, D-arabinohydroxamic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
3HKA
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BU of 3hka by Molmil
Crystal structure of uronate isomerase from Bacillus halodurans complexed with zinc and D-Fructuronate
Descriptor: CARBONATE ION, CHLORIDE ION, D-fructuronic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Nguyen, T.T, Raushel, F.M, Almo, S.C.
Deposit date:2009-05-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The mechanism of the reaction catalyzed by uronate isomerase illustrates how an isomerase may have evolved from a hydrolase within the amidohydrolase superfamily.
Biochemistry, 48, 2009
6O47
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BU of 6o47 by Molmil
human cGAS core domain (K427E/K428E) bound with RU-521
Descriptor: (3~{S})-3-[1-[4,5-bis(chloranyl)-1~{H}-benzimidazol-2-yl]-3-methyl-5-oxidanyl-pyrazol-4-yl]-3~{H}-2-benzofuran-1-one, 2-(4,5-dichloro-1H-benzimidazol-2-yl)-5-methyl-4-[(1R)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]-1,2-dihydro-3H-pyrazol-3-one, CITRIC ACID, ...
Authors:Xie, W, Lama, L, Adura, C, Glickman, J.F, Tuschl, T, Patel, D.J.
Deposit date:2019-02-28
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation.
Proc.Natl.Acad.Sci.USA, 116, 2019
3WOH
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BU of 3woh by Molmil
Structure of Ketoreductase SiaM from Streptomyces sp. A7248
Descriptor: SiaM
Authors:Wang, H, Zhang, H.
Deposit date:2013-12-29
Release date:2014-08-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insight into the tetramerization of an iterative ketoreductase siam through aromatic residues in the interfaces
Plos One, 9, 2014
5FNZ
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BU of 5fnz by Molmil
F206W mutant of FAD synthetase from Corynebacterium ammoniagenes
Descriptor: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION
Authors:Martinez-Julvez, M, Herguedas, B, Milagros, M.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes.
Sci Rep, 7, 2017
5FO1
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BU of 5fo1 by Molmil
E301A mutant of FAD synthetase from Corynebacterium ammoniagenes
Descriptor: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION
Authors:Martinez-Julvez, M, Herguedas, B, Milagros, M.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes.
Sci Rep, 7, 2017
5FO0
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BU of 5fo0 by Molmil
D298E mutant of FAD synthetase from Corynebacterium ammoniagenes
Descriptor: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION
Authors:Martinez-Julvez, M, Herguedas, B, Milagros, M.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes.
Sci Rep, 7, 2017
1RDF
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BU of 1rdf by Molmil
G50P mutant of phosphonoacetaldehyde hydrolase in complex with substrate analogue vinyl sulfonate
Descriptor: ETHANESULFONIC ACID, MAGNESIUM ION, phosphonoacetaldehyde hydrolase
Authors:Lahiri, S.D, Zhang, G, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2003-11-05
Release date:2004-08-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of the substrate specificity loop of the HAD superfamily cap domain
Biochemistry, 43, 2004
5DC0
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BU of 5dc0 by Molmil
CRYSTAL STRUCTURE OF MONOBODY GG3/ABL1 SH2 DOMAIN COMPLEX
Descriptor: Fibronectin, Tyrosine-protein kinase ABL1
Authors:Wojcik, J.B, Grabe, G, Koide, S.
Deposit date:2015-08-22
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface.
J.Biol.Chem., 291, 2016
5DC9
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BU of 5dc9 by Molmil
CRYSTAL STRUCTURE OF MONOBODY AS25/ABL1 SH2 DOMAIN COMPLEX, CRYSTAL B
Descriptor: AS25 monobody, GLYCEROL, IMIDAZOLE, ...
Authors:Wojcik, J.B, Koide, A, Koide, S.
Deposit date:2015-08-23
Release date:2016-03-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Allosteric Inhibition of Bcr-Abl Kinase by High Affinity Monobody Inhibitors Directed to the Src Homology 2 (SH2)-Kinase Interface.
J.Biol.Chem., 291, 2016
4X0R
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BU of 4x0r by Molmil
Crystal structure of human MxB stalk domain
Descriptor: Interferon-induced GTP-binding protein Mx2
Authors:Yu, X.-F, Xie, W.
Deposit date:2014-11-23
Release date:2014-12-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.905 Å)
Cite:Structural insight into the assembly of human anti-HIV dynamin-like protein MxB/Mx2.
Biochem.Biophys.Res.Commun., 456, 2015
6VIE
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BU of 6vie by Molmil
Structure of caspase-1 in complex with gasdermin D
Descriptor: Caspase-1 subunit p10, Caspase-1 subunit p20, Gasdermin-D
Authors:Liu, Z, Xiao, T.S.
Deposit date:2020-01-13
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Caspase-1 Engages Full-Length Gasdermin D through Two Distinct Interfaces That Mediate Caspase Recruitment and Substrate Cleavage.
Immunity, 53, 2020
5KF6
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BU of 5kf6 by Molmil
Structure of proline utilization A from Sinorhizobium meliloti complexed with L-tetrahydrofuroic acid and NAD+ in space group P21
Descriptor: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Tanner, J.J.
Deposit date:2016-06-12
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of Proline Utilization A (PutA) Reveal the Fold and Functions of the Aldehyde Dehydrogenase Superfamily Domain of Unknown Function.
J.Biol.Chem., 291, 2016

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