PDB: 108 件ウェブページステータス検索Chemie searchBIRD

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1L6G	Alanine racemase bound with N-(5'-phosphopyridoxyl)-D-alanine 分子名称: N-(5'-PHOSPHOPYRIDOXYL)-D-ALANINE, alanine racemase 著者 Watanabe, A, Yoshimura, T, Mikami, B, Hayashi, H, Kagamiyama, H, Esaki, N. 登録日 2002-03-10 公開日 2002-06-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Reaction mechanism of alanine racemase from Bacillus stearothermophilus: x-ray crystallographic studies of the enzyme bound with N-(5'-phosphopyridoxyl)alanine. J.Biol.Chem., 277, 2002
1L6F	Alanine racemase bound with N-(5'-phosphopyridoxyl)-L-alanine 分子名称: ALANYL-PYRIDOXAL-5'-PHOSPHATE, alanine racemase 著者 Watanabe, A, Yoshimura, T, Mikami, B, Hayashi, H, Kagamiyama, H, Esaki, N. 登録日 2002-03-09 公開日 2002-06-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Reaction mechanism of alanine racemase from Bacillus stearothermophilus: x-ray crystallographic studies of the enzyme bound with N-(5'-phosphopyridoxyl)alanine. J.Biol.Chem., 277, 2002
6Q72	Crystal structure of the alanine racemase from Bacillus subtilis in the presence of only PEG 4000 and Magnesium chloride in the crystallization condition 分子名称: Alanine racemase 2, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE 著者 Bernardo-Garcia, N, Gago, F, Hermoso, J.A. 登録日 2018-12-12 公開日 2019-04-24 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Cold-induced aldimine bond cleavage by Tris in Bacillus subtilis alanine racemase. Org.Biomol.Chem., 17, 2019
4WR3	Y274F alanine racemase from E. coli 分子名称: Alanine racemase, biosynthetic, GLYCEROL, ... 著者 Squire, C.J, Yosaatmadja, Y, Patrick, W.M. 登録日 2014-10-23 公開日 2015-11-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mechanistic and Evolutionary Insights from the Reciprocal Promiscuity of Two Pyridoxal Phosphate-dependent Enzymes. J.Biol.Chem., 291, 2016
4XBJ	Y274F alanine racemase from E. coli inhibited by l-ala-p 分子名称: Alanine racemase, biosynthetic, SULFATE ION, ... 著者 Squire, C.J, Yosaatmadja, Y, Patrick, W.M. 登録日 2014-12-17 公開日 2015-12-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Mechanistic and Evolutionary Insights from the Reciprocal Promiscuity of Two Pyridoxal Phosphate-dependent Enzymes. J.Biol.Chem., 291, 2016
1NIU	ALANINE RACEMASE WITH BOUND INHIBITOR DERIVED FROM L-CYCLOSERINE 分子名称: Alanine Racemase, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE 著者 Fenn, T.D, Stamper, G.F, Morollo, A.A, Ringe, D. 登録日 2002-12-26 公開日 2003-09-16 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 A side reaction of alanine racemase: transamination of cycloserine. Biochemistry, 42, 2003
4Y2W	Crystal structure of a thermostable alanine racemase from Thermoanaerobacter tengcongensis MB4 分子名称: ALANINE, Alanine racemase 1, PHOSPHATE ION 著者 Xu, X, Ju, J, Dong, H. 登録日 2015-02-10 公開日 2015-09-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of a Thermostable Alanine Racemase from Thermoanaerobacter tengcongensis MB4 Reveals the Role of Gln360 in Substrate Selection Plos One, 10, 2015
4FS9	Complex structure of a broad specificity amino acid racemase (Bar) within the reactive intermediate 分子名称: Broad specificity amino acid racemase, N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-LYSINE 著者 Wang, W.C, Wu, H.M. 登録日 2012-06-27 公開日 2013-03-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structures of lysine-preferred racemases, the non-antibiotic selectable markers for transgenic plants Plos One, 7, 2012
5ZL6	Histidine Racemase from Leuconostoc mesenteroides subsp. sake NBRC 102480 分子名称: Histidine racemase, PYRIDOXAL-5'-PHOSPHATE 著者 Adachi, M, Shimizu, R, Oikawa, T. 登録日 2018-03-27 公開日 2018-11-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The first identification and characterization of a histidine-specific amino acid racemase, histidine racemase from a lactic acid bacterium, Leuconostoc mesenteroides subsp. sake NBRC 102480. Amino Acids, 51, 2019
5YYC	Crystal structure of alanine racemase from Bacillus pseudofirmus (OF4) 分子名称: Alanine racemase, PYRIDOXAL-5'-PHOSPHATE 著者 Dong, H, Hu, T.T, He, G.Z, Lu, D.R, Qi, J.X, Dou, Y.S, Long, W, He, X, Su, D, Ju, J.S. 登録日 2017-12-08 公開日 2019-01-02 実験手法 X-RAY DIFFRACTION (1.801 Å) 主引用文献 Structural features and kinetic characterization of alanine racemase from Bacillus pseudofirmus OF4. Biochem. Biophys. Res. Commun., 497, 2018
1EPV	ALANINE RACEMASE WITH BOUND INHIBITOR DERIVED FROM D-CYCLOSERINE 分子名称: ALANINE RACEMASE, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE 著者 Fenn, T.D, Stamper, G.F, Morollo, A.A, Ringe, D. 登録日 2000-03-29 公開日 2003-01-14 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 A side reaction of alanine racemase: transamination of cycloserine. Biochemistry, 42, 2003
6SCZ	Mycobacterium tuberculosis alanine racemase inhibited by DCS 分子名称: (~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene-[(4~{R})-3-oxidanylidene-1,2-oxazolidin-4-yl]azanium, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ... 著者 de Chiara, C, Purkiss, A, Prosser, G, Homsak, M, de Carvalho, L.P.S. 登録日 2019-07-26 公開日 2020-04-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 D-Cycloserine destruction by alanine racemase and the limit of irreversible inhibition. Nat.Chem.Biol., 16, 2020
6A2F	Crystal structure of biosynthetic alanine racemase from Pseudomonas aeruginosa 分子名称: ACETATE ION, Alanine racemase, biosynthetic, ... 著者 Dong, H, Li, S. 登録日 2018-06-11 公開日 2018-08-08 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Enzymatic characterization and crystal structure of biosynthetic alanine racemase from Pseudomonas aeruginosa PAO1. Biochem.Biophys.Res.Commun., 503, 2018
6G56	Apo-structure of the alanine racemase from Staphylococcus aureus 分子名称: Alanine racemase 1, GLYCEROL, SULFATE ION 著者 Hoegl, A, Sieber, S.A, Schneider, S. 登録日 2018-03-29 公開日 2018-05-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics. Nat Chem, 10, 2018
6G59	Structure of the alanine racemase from Staphylococcus aureus in complex with an pyridoxal-6- phosphate derivative 分子名称: (6-ethynyl-4-methanoyl-5-oxidanyl-pyridin-3-yl)methyl dihydrogen phosphate, Alanine racemase 1, CHLORIDE ION, ... 著者 Hoegl, A, Sieber, S.A, Schneider, S. 登録日 2018-03-29 公開日 2018-05-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics. Nat Chem, 10, 2018
4ILS	Crystal structure of engineered protein. northeast structural genomics Consortium target or117 分子名称: Engineered protein 著者 Seetharaman, J, Lew, S, Nivon, L, Baker, D, Bjelic, S, Ciccosanti, C, Sahdev, S, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) 登録日 2012-12-31 公開日 2013-03-20 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of engineered protein. northeast structural genomics Consortium target or117 To be Published
1FTX	Crystal structure of alanine racemase in complex with D-alanine phosphonate 分子名称: (1S)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]ETHYLPHOSPHONIC ACID, ALANINE RACEMASE 著者 Stamper, G.F, Ringe, D. 登録日 2000-09-13 公開日 2003-01-14 最終更新日 2017-02-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献
6G58	Structure of the alanine racemase from Staphylococcus aureus in complex with a pyridoxal 5' phosphate-derivative 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, (6-but-3-ynyl-4-methyl-5-oxidanyl-pyridin-3-yl)methyl dihydrogen phosphate, ... 著者 Hoegl, A, Sieber, S.A, Schneider, S. 登録日 2018-03-29 公開日 2018-05-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics. Nat Chem, 10, 2018
5FAG	Alanine Racemase from Streptomyces coelicolor A3(2) with Bound Propionate Inhibitor 分子名称: Alanine racemase, NITRATE ION, PROPANOIC ACID, ... 著者 Tassoni, R, Pannu, N.S. 登録日 2015-12-11 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2). Biochem. Biophys. Res. Commun., 483, 2017
5FAC	Alanine Racemase from Streptomyces coelicolor A3(2) 分子名称: Alanine racemase, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE 著者 Tassoni, R, Pannu, N.S. 登録日 2015-12-11 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2). Biochem. Biophys. Res. Commun., 483, 2017
1RCQ	The 1.45 A crystal structure of alanine racemase from a pathogenic bacterium, Pseudomonas aeruginosa, contains both internal and external aldimine forms 分子名称: D-LYSINE, PYRIDOXAL-5'-PHOSPHATE, catabolic alanine racemase DadX 著者 Le Magueres, P, Im, H, Dvorak, A, Strych, U, Benedik, M, Krause, K.L. 登録日 2003-11-04 公開日 2004-06-01 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure at 1.45 A resolution of alanine racemase from a pathogenic bacterium, Pseudomonas aeruginosa, contains both internal and external aldimine forms. Biochemistry, 42, 2003
5FAJ	Alanine Racemase from Streptomyces coelicolor A3(2) in complex with D-Cycloserine 分子名称: Alanine racemase, CHLORIDE ION, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE, ... 著者 Tassoni, R, Pannu, N.S. 登録日 2015-12-11 公開日 2016-12-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Structural and functional characterization of the alanine racemase from Streptomyces coelicolor A3(2). Biochem. Biophys. Res. Commun., 483, 2017
1SFT	ALANINE RACEMASE 分子名称: ACETATE ION, ALANINE RACEMASE, PYRIDOXAL-5'-PHOSPHATE 著者 Shaw, J.P, Petsko, G.A, Ringe, D. 登録日 1996-09-20 公開日 1997-02-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Determination of the structure of alanine racemase from Bacillus stearothermophilus at 1.9-A resolution. Biochemistry, 36, 1997
7XLL	Alanine racemase from Lactobacillus sakei Uonuma-1. 分子名称: ACETATE ION, ALANINE, Alanine racemase, ... 著者 Shimizu-Ibuka, A, Kato, Y. 登録日 2022-04-22 公開日 2023-03-01 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Regulation of alanine racemase activity by carboxylates and the d-type substrate d-alanine. Febs J., 290, 2023
2ODO	Crystal structure of Pseudomonas Fluorescens alanine racemase 分子名称: ACETATE ION, Alanine racemase 著者 Tsuge, H, Ohnishi, K, Yokoigawa, K. 登録日 2006-12-25 公開日 2008-02-05 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of Pseudomonas Fluorescens alanine racemase To be Published

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