Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2ISV
DownloadVisualize
BU of 2isv by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with phosphoglycolohydroxamate
Descriptor: PHOSPHOGLYCOLOHYDROXAMIC ACID, Putative fructose-1,6-bisphosphate aldolase, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2006-10-18
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization, kinetics, and crystal structures of fructose-1,6-bisphosphate aldolase from the human parasite, Giardia lamblia.
J.Biol.Chem., 282, 2007
2ISW
DownloadVisualize
BU of 2isw by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with phosphoglycolohydroxamate
Descriptor: PHOSPHOGLYCOLOHYDROXAMIC ACID, Putative fructose-1,6-bisphosphate aldolase, ZINC ION
Authors:Galkin, A, Herzberg, O.
Deposit date:2006-10-18
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization, kinetics, and crystal structures of fructose-1,6-bisphosphate aldolase from the human parasite, Giardia lamblia.
J.Biol.Chem., 282, 2007
2OH7
DownloadVisualize
BU of 2oh7 by Molmil
The Crystal Structure of Cypovirus Polyhedra containing the Human ZIP-kinase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Coulibaly, F, Chiu, E, Ikeda, K, Gutmann, S, Haebel, P.W, Schulze-Briese, C, Mori, H, Metcalf, P.
Deposit date:2007-01-09
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The molecular organization of cypovirus polyhedra.
Nature, 446, 2007
7FGF
DownloadVisualize
BU of 7fgf by Molmil
Cryo-EM structure of CCHFV envelope protein Gc in postfusion conformation
Descriptor: Glycoprotein C
Authors:Li, N, Rao, G, Fu, Y, Cao, S.
Deposit date:2021-07-26
Release date:2022-03-16
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structure of glycoprotein C from Crimean-Congo hemorrhagic fever virus.
Virol Sin, 37, 2022
8G0I
DownloadVisualize
BU of 8g0i by Molmil
High Affinity nanobodies against GFP
Descriptor: CHLORIDE ION, Green fluorescent protein, LaG24 Nanobody, ...
Authors:Ketaren, N.E, Rout, M.P, Almo, S.
Deposit date:2023-01-31
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High Affinity nanobodies against GFP
To Be Published
5KX5
DownloadVisualize
BU of 5kx5 by Molmil
Crystal structure of tubulin-stathmin-TTL-Compound 11 complex
Descriptor: (2~{S},4~{R})-4-[[2-[(1~{R},3~{R})-1-acetyloxy-3-[[(2~{S},3~{S})-2-[[(2~{R})-1,2-dimethylpyrrolidin-2-yl]carbonylamino]-3-methyl-pentanoyl]-methyl-amino]-4-methyl-pentyl]-1,3-thiazol-4-yl]carbonylamino]-5-(4-aminophenyl)-2-methyl-pentanoic acid, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Parris, K.
Deposit date:2016-07-20
Release date:2016-12-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design, Synthesis, and Cytotoxic Evaluation of Novel Tubulysin Analogues as ADC Payloads.
ACS Med Chem Lett, 7, 2016
2WQR
DownloadVisualize
BU of 2wqr by Molmil
The high resolution crystal structure of IgE Fc
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, IG EPSILON CHAIN C REGION, ...
Authors:Dhaliwal, B, Sutton, B.J, Beavil, A.J.
Deposit date:2009-08-26
Release date:2010-11-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational Changes in Ige Contribute to its Uniquely Slow Dissociation Rate from Receptor Fceri
Nat.Struct.Mol.Biol., 18, 2011
2J8U
DownloadVisualize
BU of 2j8u by Molmil
Large CDR3a loop alteration as a function of MHC mutation.
Descriptor: AHIII TCR ALPHA CHAIN, AHIII TCR BETA CHAIN, Beta-2-microglobulin, ...
Authors:Miller, P.J, Benhar, Y.P, Biddison, W, Collins, E.J.
Deposit date:2006-10-27
Release date:2007-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Single MHC mutation eliminates enthalpy associated with T cell receptor binding.
J. Mol. Biol., 373, 2007
1CIC
DownloadVisualize
BU of 1cic by Molmil
IDIOTOPE-ANTI-IDIOTOPE FAB-FAB COMPLEX; D1.3-E225
Descriptor: PROTEIN (IG HEAVY CHAIN V REGIONS)
Authors:Bentley, G.A.
Deposit date:1999-03-31
Release date:1999-04-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of an idiotope-anti-idiotope complex.
Nature, 348, 1990
5VKJ
DownloadVisualize
BU of 5vkj by Molmil
Crystal structure of human CD22 Ig domains 1-3
Descriptor: B-cell receptor CD22, GLYCEROL, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Julien, J.P, Ereno-Orbea, J, Sicard, T.
Deposit date:2017-04-21
Release date:2017-10-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Molecular basis of human CD22 function and therapeutic targeting.
Nat Commun, 8, 2017
5LP2
DownloadVisualize
BU of 5lp2 by Molmil
Adhesin domain of the type 1 HopQ of Helicobacter pylori strain G27
Descriptor: HopQ
Authors:Moonens, K, Kruse, T, Gerhard, M, Remaut, H.
Deposit date:2016-08-11
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Helicobacter pylori adhesin HopQ engages in a virulence-enhancing interaction with human CEACAMs.
Nat Microbiol, 2, 2016
5MY6
DownloadVisualize
BU of 5my6 by Molmil
Crystal structure of a HER2-Nb complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Sterckx, Y.G.-J, D'Huyvetter, M, Devoogdt, N.
Deposit date:2017-01-25
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:(131)I-labeled Anti-HER2 Camelid sdAb as a Theranostic Tool in Cancer Treatment.
Clin. Cancer Res., 23, 2017
5B3N
DownloadVisualize
BU of 5b3n by Molmil
The crystal structure of anti-H4K20me1_scFv, 15F11
Descriptor: anti-H4K20me1_scFv
Authors:Kujirai, T, Horikoshi, N, Kurumizaka, H.
Deposit date:2016-03-04
Release date:2016-09-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A Genetically Encoded Probe for Live-Cell Imaging of H4K20 Monomethylation
J.Mol.Biol., 428, 2016
5VKM
DownloadVisualize
BU of 5vkm by Molmil
Crystal structure of human CD22 Ig domains 1-3 in complex with alpha 2-6 sialyllactose
Descriptor: B-cell receptor CD22, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Julien, J.P, Ereno-Orbea, J, Sicard, T.
Deposit date:2017-04-21
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis of human CD22 function and therapeutic targeting.
Nat Commun, 8, 2017
4HJJ
DownloadVisualize
BU of 4hjj by Molmil
Structure Reveals Function of the Dual Variable Domain Immunoglobulin (DVD-Ig) Molecule
Descriptor: Anti-IL12 Anti-IL18 DFab Heavy Chain, Anti-IL12 Anti-IL18 DFab Light Chain, CHLORIDE ION, ...
Authors:Jakob, C.G, Edalji, R, Judge, R.A, DiGiammarino, E, Li, Y, Gu, J, Ghayur, T.
Deposit date:2012-10-12
Release date:2013-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure reveals function of the dual variable domain immunoglobulin (DVD-Ig[TM]) molecule
MAbs, 5, 2013
2KRI
DownloadVisualize
BU of 2kri by Molmil
Structure of a complex between domain V of beta2-glycoprotein I and the fourth ligand-binding module from LDLR determined with Haddock
Descriptor: Beta-2-glycoprotein 1, CALCIUM ION, Low-density lipoprotein receptor
Authors:Beglova, N.
Deposit date:2009-12-18
Release date:2010-03-31
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Mode of interaction between beta2GPI and lipoprotein receptors suggests mutually exclusive binding of beta2GPI to the receptors and anionic phospholipids.
Structure, 18, 2010
7SZU
DownloadVisualize
BU of 7szu by Molmil
Crystal structure of Pepper RNA aptamer in complex with HBC ligand and Fab BL3-6
Descriptor: 4-[(~{Z})-1-cyano-2-[4-[2-hydroxyethyl(methyl)amino]phenyl]ethenyl]benzenecarbonitrile, BL3-6 Fab heavy chain, BL3-6 Fab light chain, ...
Authors:Rees, H.C, Piccirilli, J.A.
Deposit date:2021-11-29
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural Basis for Fluorescence Activation by Pepper RNA.
Acs Chem.Biol., 17, 2022
6GUT
DownloadVisualize
BU of 6gut by Molmil
CRYSTAL STRUCTURE OF NON-TYPEABLE HAEMOPHILUS INFLUENZAE PROTEIN E AND PILA EXPRESSED AS A SINGLE-CHAIN CHIMERIC PROTEIN
Descriptor: 23S rRNA pseudouridine synthase D,PilA, ACETATE ION, GLYCEROL, ...
Authors:Somers, D.
Deposit date:2018-06-19
Release date:2019-05-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Design and Characterization of Protein E-PilA, a Candidate Fusion Antigen for Nontypeable Haemophilus influenzae Vaccine.
Infect.Immun., 87, 2019
6GUS
DownloadVisualize
BU of 6gus by Molmil
CRYSTAL STRUCTURE OF PROTEIN E FROM NON-TYPEABLE HAEMOPHILUS INFLUENZAE
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Somers, D.
Deposit date:2018-06-19
Release date:2019-05-29
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Design and Characterization of Protein E-PilA, a Candidate Fusion Antigen for Nontypeable Haemophilus influenzae Vaccine.
Infect.Immun., 87, 2019
7WE7
DownloadVisualize
BU of 7we7 by Molmil
SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv282
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 282, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WEE
DownloadVisualize
BU of 7wee by Molmil
SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv265
Descriptor: Spike glycoprotein, The heavy chain of Fab XGv265, The light chain of Fab XGv265
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WEB
DownloadVisualize
BU of 7web by Molmil
SARS-CoV-2 Omicron variant spike protein with two XGv347 binding to two open state RBDs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WEF
DownloadVisualize
BU of 7wef by Molmil
SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv289
Descriptor: Spike protein S1, The heavy chain of Fab XGv289, The light chain of Fab XGv289
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WE9
DownloadVisualize
BU of 7we9 by Molmil
SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv289
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Wang, X, Wang, L.
Deposit date:2021-12-23
Release date:2022-05-04
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022
7WLC
DownloadVisualize
BU of 7wlc by Molmil
SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv282
Descriptor: Heavy chain of XGv282, Light chain of XGv282, Spike protein S1
Authors:Wang, X, Wang, L.
Deposit date:2022-01-13
Release date:2022-04-13
Last modified:2022-05-04
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Memory B cell repertoire from triple vaccinees against diverse SARS-CoV-2 variants.
Nature, 603, 2022

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon