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2YFI
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BU of 2yfi by Molmil
Crystal Structure of Biphenyl dioxygenase variant RR41 (BPDO-RR41)
Descriptor: BIPHENYL DIOXYGENASE SUBUNIT ALPHA, BIPHENYL DIOXYGENASE SUBUNIT BETA, FE (II) ION, ...
Authors:Kumar, P, Bolin, J.T.
Deposit date:2011-04-06
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Retuning Rieske-Type Oxygenases to Expand Substrate Range.
J.Biol.Chem., 286, 2011
8S4C
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BU of 8s4c by Molmil
CdaA-H04 complex
Descriptor: DAMINOZIDE, Diadenylate cyclase
Authors:Neumann, P, Ficner, R.
Deposit date:2024-02-21
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CdaA-H04 complex
To Be Published
5DQU
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BU of 5dqu by Molmil
Crystal Structure of Cas-DNA-10 complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(*GP*AP*GP*TP*CP*GP*AP*TP*GP*CP*TP*TP*TP*TP*T)-3'), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
8SFL
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BU of 8sfl by Molmil
WT CRISPR-Cas12a with a 15bp R-loop
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (40-MER), RNA (34-MER)
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:WT CRISPR-Cas12a with a 15bp R-loop
To Be Published
2YJJ
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BU of 2yjj by Molmil
Structure of Dps from MICROBACTERIUM ARBORESCENS in the low iron form
Descriptor: AFP, FE (III) ION, Iron(II) oxide
Authors:Zeth, K, Buecheler, R, Boland, W.
Deposit date:2011-05-19
Release date:2011-06-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure and Mechanism of Iron Translocation by a Dps Protein from Microbacterium Arborescens.
J.Biol.Chem., 286, 2011
8SFO
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BU of 8sfo by Molmil
WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (35-MER), DNA (40-MER), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
To Be Published
2YW4
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BU of 2yw4 by Molmil
Crystal Structure Analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from TTHB1
Descriptor: 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase
Authors:Kawano, Y, Hashimoto, K, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-19
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal Structure Analysis of the 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase from TTHB1
To be published
2YWD
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BU of 2ywd by Molmil
Crystal structure of glutamine amidotransferase
Descriptor: Glutamine amidotransferase subunit pdxT
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of glutamine amidotransferase
To be Published
2YWO
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BU of 2ywo by Molmil
Crystal structure of reduced thioredoxin-like protein from Thermus thermophilus HB8
Descriptor: Probable thiol-disulfide isomerase/thioredoxin
Authors:Ebihara, A, Manzoku, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of reduced thioredoxin-like protein from Thermus thermophilus HB8
To be Published
2YWY
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BU of 2ywy by Molmil
Structure of new antigen receptor variable domain from sharks
Descriptor: new antigen receptor variable domain
Authors:Streltsov, V.A.
Deposit date:2007-04-23
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Shark IgNAR antibody mimotopes target a murine immunoglobulin through extended CDR3 loop structures
Proteins, 71, 2007
8SE8
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BU of 8se8 by Molmil
HTRA-1 PD/SA bound to CKP 1G10
Descriptor: Cysteine knot peptide, GLYCEROL, SULFATE ION, ...
Authors:Ultsch, M.H.
Deposit date:2023-04-08
Release date:2024-07-03
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:HTRA-1 PD/SA bound to CKP 1G10
To Be Published
2YE0
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BU of 2ye0 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
8SFN
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BU of 8sfn by Molmil
WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (30-MER), DNA (31-MER), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
To Be Published
8SDP
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BU of 8sdp by Molmil
HTRA-1 PDSA bound to CKP 3A7
Descriptor: Cysteine knot peptide 3A7, SULFATE ION, Serine protease HTRA1
Authors:Ultsch, M.H, Kirchhofer, D, Wei, Y.
Deposit date:2023-04-07
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:HTRA-1 PDSA bound to CKP 3A7
To Be Published
8SFI
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BU of 8sfi by Molmil
WT CRISPR-Cas12a with a 8bp R-loop
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:WT CRISPR-Cas12a with a 8bp R-loop
To Be Published
8SFP
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BU of 8sfp by Molmil
WT CRISPR-Cas12a with the target strand in the RuvC active site.
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (40-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:WT CRISPR-Cas12a with the target strand in the RuvC active site.
To Be Published
5KLV
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BU of 5klv by Molmil
Structure of bos taurus cytochrome bc1 with fenamidone inhibited
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate, (5S)-5-methyl-2-(methylsulfanyl)-5-phenyl-3-(phenylamino)-3,5-dihydro-4H-imidazol-4-one, 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ...
Authors:Xia, D, Esser, L, Zhou, F, Zhou, Y, Xiao, Y, Tang, W.K, Yu, C.A, Qin, Z.
Deposit date:2016-06-25
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.652 Å)
Cite:Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III.
J.Biol.Chem., 291, 2016
8SFH
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BU of 8sfh by Molmil
WT CRISPR-Cas12a with a 5bp R-loop
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (32-MER), RNA (27-MER)
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:WT CRISPR-Cas12a with a 5bp R-loop
To Be Published
2YLR
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BU of 2ylr by Molmil
SNAPSHOTS OF ENZYMATIC BAEYER-VILLIGER CATALYSIS: OXYGEN ACTIVATION AND INTERMEDIATE STABILIZATION: COMPLEX WITH NADP
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHENYLACETONE MONOOXYGENASE
Authors:Orru, R, Dudek, H.M, Martinoli, C, Torres Pazmino, D.E, Royant, A, Weik, M, Fraaije, M.W, Mattevi, A.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Snapshots of Enzymatic Baeyer-Villiger Catalysis: Oxygen Activation and Intermediate Stabilization.
J.Biol.Chem., 286, 2011
2Y9W
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BU of 2y9w by Molmil
Crystal structure of PPO3, a tyrosinase from Agaricus bisporus, in deoxy-form that contains additional unknown lectin-like subunit
Descriptor: COPPER (II) ION, DI(HYDROXYETHYL)ETHER, HOLMIUM ATOM, ...
Authors:Ismaya, W.T, Rozeboom, H.J, Weijn, A, Mes, J.J, Fusetti, F, Wichers, H.J, Dijkstra, B.W.
Deposit date:2011-02-17
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Agaricus Bisporus Mushroom Tyrosinase: Identity of the Tetramer Subunits and Interaction with Tropolone.
Biochemistry, 50, 2011
2YAL
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BU of 2yal by Molmil
SinR, Master Regulator of biofilm formation in Bacillus subtilis
Descriptor: HTH-TYPE TRANSCRIPTIONAL REGULATOR SINR, NICKEL (II) ION
Authors:Colledge, V.L, Fogg, M.J, Levdikov, V.M, Leech, A, Dodson, E.J, Wilkinson, A.J.
Deposit date:2011-02-23
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure and Organisation of Sinr, the Master Regulator of Biofilm Formation in Bacillus Subtilis.
J.Mol.Biol., 411, 2011
8SFR
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BU of 8sfr by Molmil
WT CRISPR-Cas12a post nontarget strand cleavage.
Descriptor: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
Authors:Strohkendl, I, Taylor, D.W.
Deposit date:2023-04-11
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:WT CRISPR-Cas12a post nontarget strand cleavage.
To Be Published
2YE1
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BU of 2ye1 by Molmil
X-ray structure of the cyan fluorescent proteinmTurquoise-GL (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION
Authors:von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
Deposit date:2011-03-25
Release date:2012-04-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Characterization of the Cyan Fluorescent Protein Mturquoise-Gl
To be Published
8T9X
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BU of 8t9x by Molmil
Zophobas morio black wasting virus strain NJ2-molitor virion structure
Descriptor: DNA (5'-D(P*CP*AP*GP*GP*CP*CP*AP*AP*A)-3'), DNA (5'-D(P*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*AP*A)-3'), ...
Authors:Penzes, J.J, Kaelber, J.T.
Deposit date:2023-06-26
Release date:2024-02-21
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Sequencing-free discovery by cryo-EM of a pathogenic parvovirus causing mass mortality of farmed beetles
To Be Published
2YRW
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BU of 2yrw by Molmil
Crystal structure of GAR synthetase from Geobacillus kaustophilus
Descriptor: PHOSPHATE ION, Phosphoribosylglycinamide synthetase
Authors:Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-03
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria
J.Biochem., 148, 2010

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