Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3FCZ
DownloadVisualize
BU of 3fcz by Molmil
Adaptive protein evolution grants organismal fitness by improving catalysis and flexibility
Descriptor: Beta-lactamase 2, ZINC ION
Authors:Tomatis, P, Fabiane, S, Simona, F, Carloni, P, Sutton, B, Vila, A.
Deposit date:2008-11-24
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Adaptive protein evolution grants organismal fitness by improving catalysis and flexibility.
Proc.Natl.Acad.Sci.USA, 105, 2008
3FAI
DownloadVisualize
BU of 3fai by Molmil
The Di Zinc Carbapenemase CphA N220G mutant
Descriptor: Beta-lactamase, CHLORIDE ION, GLYCEROL, ...
Authors:Delbruck, H, Hoffmann, K.M.V.
Deposit date:2008-11-17
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of the dizinc subclass B2 metallo-beta-lactamase CphA reveals that the second inhibitory zinc ion binds in the histidine site
Antimicrob.Agents Chemother., 53, 2009
3F9O
DownloadVisualize
BU of 3f9o by Molmil
Crystal Structure of the Di-Zinc Carbapenemase CphA from Aeromonas Hydrophila
Descriptor: Beta-lactamase, CARBONATE ION, CHLORIDE ION, ...
Authors:Delbruck, H, Hoffmann, K.M.V.
Deposit date:2008-11-14
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:The structure of the dizinc subclass B2 metallo-beta-lactamase CphA reveals that the second inhibitory zinc ion binds in the histidine site
Antimicrob.Agents Chemother., 53, 2009
3ESH
DownloadVisualize
BU of 3esh by Molmil
Crystal structure of a probable metal-dependent hydrolase from Staphylococcus aureus. Northeast Structural Genomics target ZR314
Descriptor: Protein similar to metal-dependent hydrolase
Authors:Seetharaman, J, Chen, Y, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-10-06
Release date:2008-10-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a probable metal-dependent hydrolase from Staphylococcus aureus. Northeast Structural Genomics target ZR314
To be Published
3DH8
DownloadVisualize
BU of 3dh8 by Molmil
Structure of Pseudomonas Quinolone Signal Response Protein PqsE
Descriptor: FE (III) ION, Uncharacterized protein PA1000, bis(4-nitrophenyl) hydrogen phosphate
Authors:Yu, S, Blankenfeldt, W.
Deposit date:2008-06-17
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
2VW8
DownloadVisualize
BU of 2vw8 by Molmil
Crystal Structure of Quinolone signal response protein pqsE from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, FE (II) ION, ...
Authors:Carter, L.G, Johnson, K.A, Liu, H, Mcmahon, S.A, Oke, M, Naismith, J.H, White, M.F.
Deposit date:2008-06-17
Release date:2010-07-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
J.Struct.Funct.Genomics, 11, 2010
3DHB
DownloadVisualize
BU of 3dhb by Molmil
1.4 Angstrom Structure of N-Acyl Homoserine Lactone Hydrolase with the Product N-Hexanoyl-L-Homoserine Bound at The Catalytic Metal Center
Descriptor: GLYCEROL, N-Acyl Homoserine Lactone Hydrolase, N-hexanoyl-L-homoserine, ...
Authors:Liu, D, Momb, J, Thomas, P.W, Moulin, A, Petsko, G.A, Fast, W, Ringe, D.
Deposit date:2008-06-17
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis. 1. Product-bound structures.
Biochemistry, 47, 2008
3DHC
DownloadVisualize
BU of 3dhc by Molmil
1.3 Angstrom Structure of N-Acyl Homoserine Lactone Hydrolase with the Product N-Hexanoyl-L-Homocysteine Bound to The catalytic Metal Center
Descriptor: GLYCEROL, N-Acyl Homoserine Lactone Hydrolase, N-hexanoyl-L-homocysteine, ...
Authors:Liu, D, Momb, J, Thomas, P.W, Moulin, A, Petsko, G.A, Fast, W, Ringe, D.
Deposit date:2008-06-17
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis. 1. Product-bound structures.
Biochemistry, 47, 2008
3DHA
DownloadVisualize
BU of 3dha by Molmil
An Ultral High Resolution Structure of N-Acyl Homoserine Lactone Hydrolase with the Product N-Hexanoyl-L-Homoserine Bound at An Alternative Site
Descriptor: GLYCEROL, N-Acyl Homoserine Lactone Hydrolase, N-hexanoyl-L-homoserine, ...
Authors:Liu, D, Momb, J, Thomas, P.W, Moulin, A, Petsko, G.A, Fast, W, Ringe, D.
Deposit date:2008-06-17
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis. 1. Product-bound structures.
Biochemistry, 47, 2008
2ZO4
DownloadVisualize
BU of 2zo4 by Molmil
Crystal structure of metallo-beta-lactamase family protein TTHA1429 from Thermus thermophilus HB8
Descriptor: Metallo-beta-lactamase family protein, ZINC ION
Authors:Yamamura, A, Nagata, K, Agari, Y, Ebihara, A, Nakagawa, N, Yokoyama, S, Kuramitsu, S, Tanokura, M.
Deposit date:2008-05-05
Release date:2009-03-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TTHA1429, a novel metallo-beta-lactamase superfamily protein from Thermus thermophilus HB8.
Proteins, 73, 2008
2R2D
DownloadVisualize
BU of 2r2d by Molmil
Structure of a quorum-quenching lactonase (AiiB) from Agrobacterium tumefaciens
Descriptor: GLYCEROL, PHOSPHATE ION, ZINC ION, ...
Authors:Liu, D, Thomas, P.W, Momb, J, Hoang, Q, Petsko, G.A, Ringe, D, Fast, W.
Deposit date:2007-08-24
Release date:2007-10-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and specificity of a quorum-quenching lactonase (AiiB) from Agrobacterium tumefaciens.
Biochemistry, 46, 2007
2QJS
DownloadVisualize
BU of 2qjs by Molmil
Stenotrophomonas maltophilia L1 metallo-beta-lactamase Asp-120 Asn mutant
Descriptor: Metallo-beta-lactamase L1, ZINC ION
Authors:Crisp, J, Conners, R, Spencer, J.
Deposit date:2007-07-09
Release date:2007-08-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis for the Role of Asp-120 in Metallo-beta-lactamases
Biochemistry, 46, 2007
2QIN
DownloadVisualize
BU of 2qin by Molmil
Stenotrophomonas maltophilia L1 Metallo-beta-Lactamase Asp-120 Cys mutant
Descriptor: MAGNESIUM ION, Metallo-beta-lactamase L1, ZINC ION
Authors:Spencer, J.
Deposit date:2007-07-05
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural Basis for the Role of Asp-120 in Metallo-beta-lactamases.
Biochemistry, 46, 2007
2QED
DownloadVisualize
BU of 2qed by Molmil
Crystal structure of Salmonella thyphimurium LT2 glyoxalase II
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, Hydroxyacylglutathione hydrolase
Authors:Leite, N.R, Campos Bermudez, V.A, Krogh, R, Oliva, G, Soncini, F.C, Vila, A.J.
Deposit date:2007-06-25
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Biochemical and Structural Characterization of Salmonella typhimurium Glyoxalase II: New Insights into Metal Ion Selectivity
Biochemistry, 46, 2007
2QDS
DownloadVisualize
BU of 2qds by Molmil
Crystal Structure of the Zinc Carbapenemase CPHA in Complex with the Inhibitor D-Captopril
Descriptor: 1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID, Beta-lactamase, GLYCEROL, ...
Authors:Garau, G, Dideberg, O.
Deposit date:2007-06-21
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis for the broad-spectrum inhibition of metallo-beta-lactamases by thiols.
Org.Biomol.Chem., 6, 2008
2QDT
DownloadVisualize
BU of 2qdt by Molmil
Structural Basis for the Broad-Spectrum Inhibition of Metallo-{Beta}-Lactamases: L1- IS38 Complex
Descriptor: Metallo-beta-lactamase L1, N-(3-MERCAPTOPROPANOYL)-D-ALANINE, SULFATE ION, ...
Authors:Garau, G, Dideberg, O.
Deposit date:2007-06-21
Release date:2007-08-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the broad-spectrum inhibition of metallo-beta-lactamases by thiols.
Org.Biomol.Chem., 6, 2008
2Q42
DownloadVisualize
BU of 2q42 by Molmil
Ensemble refinement of the protein crystal structure of glyoxalase II from Arabidopsis thaliana gene At2g31350
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, FE (III) ION, ...
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.742 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
2Q0J
DownloadVisualize
BU of 2q0j by Molmil
Structure of Pseudomonas Quinolone Signal Response Protein PqsE
Descriptor: BENZOIC ACID, FE (III) ION, Quinolone signal response protein
Authors:Yu, S, Jensen, V, Feldmann, I, Haussler, S, Blankenfeldt, W.
Deposit date:2007-05-22
Release date:2008-06-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
2Q0I
DownloadVisualize
BU of 2q0i by Molmil
Structure of Pseudomonas Quinolone Signal Response Protein PqsE
Descriptor: BENZOIC ACID, FE (III) ION, Quinolone signal response protein
Authors:Yu, S, Jensen, V, Feldmann, I, Haussler, S, Blankenfeldt, W.
Deposit date:2007-05-22
Release date:2008-06-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure elucidation and preliminary assessment of hydrolase activity of PqsE, the Pseudomonas quinolone signal (PQS) response protein.
Biochemistry, 48, 2009
2YZ3
DownloadVisualize
BU of 2yz3 by Molmil
Crystallographic Investigation of Inhibition Mode of the VIM-2 Metallo-beta-lactamase from Pseudomonas aeruginosa with Mercaptocarboxylate Inhibitor
Descriptor: (S)-2-(MERCAPTOMETHYL)-5-PHENYLPENTANOIC ACID, Metallo-beta-lactamase, SULFATE ION, ...
Authors:Yamaguchi, Y, Yamagata, Y, Arakawa, Y, Kurosaki, H.
Deposit date:2007-05-02
Release date:2008-03-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic investigation of the inhibition mode of a VIM-2 metallo-beta-lactamase from Pseudomonas aeruginosa by a mercaptocarboxylate inhibitor.
J.Med.Chem., 50, 2007
2UYX
DownloadVisualize
BU of 2uyx by Molmil
metallo-beta-lactamase (1BC2) single point mutant D120S
Descriptor: BETA-LACTAMASE II, GLYCEROL, ZINC ION
Authors:Larrull, L.I, Fabiane, S.M, Kowalski, J.M, Bennett, B, Sutton, B.J, Vila, A.J.
Deposit date:2007-04-20
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Asp-120 locates Zn2 for optimal metallo-beta-lactamase activity.
J. Biol. Chem., 282, 2007
2P4Z
DownloadVisualize
BU of 2p4z by Molmil
A Ferredoxin-like Metallo-beta-lactamase Superfamily Protein from Thermoanaerobacter tengcongensis
Descriptor: FE (III) ION, Metal-dependent hydrolases of the beta-lactamase superfamily II
Authors:Liang, D.-C, Gu, S.-Y.
Deposit date:2007-03-14
Release date:2008-03-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Tflp: A ferredoxin-like metallo-beta-lactamase superfamily protein from Thermoanaerobacter tengcongensis
Proteins, 72, 2008
2NZF
DownloadVisualize
BU of 2nzf by Molmil
Structure of beta-lactamase II from Bacillus cereus. R121H, C221S double mutant. Space group C2.
Descriptor: Beta-lactamase II, ZINC ION
Authors:Medrano Martin, F.J, Vila, A.J, Gonzalez, J.M.
Deposit date:2006-11-23
Release date:2007-05-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The Zn2 position in metallo-beta-lactamases is critical for activity: a study on chimeric metal sites on a conserved protein scaffold.
J.Mol.Biol., 373, 2007
2NZE
DownloadVisualize
BU of 2nze by Molmil
Structure of beta-lactamase II from Bacillus cereus. R121H, C221S double mutant. Space group P3121.
Descriptor: ACETIC ACID, Beta-lactamase II, GLYCEROL, ...
Authors:Medrano Martin, F.J, Vila, A.J, Gonzalez, J.M.
Deposit date:2006-11-23
Release date:2007-05-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Zn2 position in metallo-beta-lactamases is critical for activity: a study on chimeric metal sites on a conserved protein scaffold.
J.Mol.Biol., 373, 2007
2NYP
DownloadVisualize
BU of 2nyp by Molmil
Structure of beta-lactamase II from Bacillus cereus. R121H, C221D doble mutant with two zinc ions.
Descriptor: Beta-lactamase II, ZINC ION
Authors:Medrano Martin, F.J, Vila, A.J, Gonzalez, J.M.
Deposit date:2006-11-21
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The Zn2 position in metallo-beta-lactamases is critical for activity: a study on chimeric metal sites on a conserved protein scaffold.
J.Mol.Biol., 373, 2007

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon