PDB: 11109 resultsInfo pagesStatus searchChemie searchBIRD

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6TUU	Leishmania infantum Rad51 surrogate LiRadA10 in complex with 5,6,7,8-tetrahydro-2-naphthoic acid Descriptor: 5,6,7,8-tetrahydronaphthalene-2-carboxylic acid, CHLORIDE ION, DNA repair and recombination protein RadA, ... Authors: Pantelejevs, T, Hyvonen, M. Deposit date: 2020-01-08 Release date: 2021-01-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Development of dedicated crystallographic systems for structure-guided drug discovery To Be Published
6AT0	Chromodomain HP1 with a p-nitro-L-phenylalanine mutation at position 24 bound to histone H3 peptide containing trimethyl lysine Descriptor: Heterochromatin protein 1, trimethyl lysine histone H3 tail peptide Authors: Brustad, E.M, Baril, S.A, Waters, M.L. Deposit date: 2017-08-27 Release date: 2017-12-06 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.285 Å) Cite: Investigation of Trimethyllysine Binding by the HP1 Chromodomain via Unnatural Amino Acid Mutagenesis. J. Am. Chem. Soc., 139, 2017
6B7J	The crystal structure of 3-hydroxydecanoyl-(acyl carrier protein) dehydratase from Vibrio cholerae O1 biovar eltor str. N16961 Descriptor: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, FORMIC ACID Authors: Tan, K, Gu, M, Nocek, B, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2017-10-04 Release date: 2017-11-01 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.44 Å) Cite: The crystal structure of 3-hydroxydecanoyl-(acyl carrier protein) dehydratase from Vibrio cholerae O1 biovar eltor str. N16961 To Be Published
7CZL	Structural insights into a dimeric Psb27-photosystem II complex from a cyanobacterium Thermosynechococcus vulcanus Descriptor: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ... Authors: Pi, X, Huang, G, Xiao, Y. Deposit date: 2020-09-09 Release date: 2021-01-20 Last modified: 2021-02-10 Method: ELECTRON MICROSCOPY (3.78 Å) Cite: Structural insights into a dimeric Psb27-photosystem II complex from a cyanobacterium Thermosynechococcus vulcanus . Proc.Natl.Acad.Sci.USA, 118, 2021
6BN1	Salvador Hippo SARAH domain complex Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, NICKEL (II) ION, Scaffold protein salvador, ... Authors: Cairns, L, Kavran, J.M. Deposit date: 2017-11-15 Release date: 2018-03-14 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Salvador has an extended SARAH domain that mediates binding to Hippo kinase. J. Biol. Chem., 293, 2018
6BQM	Secreted serine protease VesC from Vibrio cholerae Descriptor: serine protease VesC Authors: Park, Y.J, Korotkov, K.V, Delarosa, J.R, Turley, S, DiMaio, F, Hol, W.G.J. Deposit date: 2017-11-28 Release date: 2018-11-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Suppressor Mutations in Type II Secretion Mutants of Vibrio cholerae: Inactivation of the VesC Protease. Msphere, 5, 2020
6W13	Human 8-oxoguanine glycosylase interrogating fully intrahelical oxoG lesion DNA Descriptor: 2-(2-ethoxyethoxy)ethanethiol, ACETATE ION, DNA (5'-D(P*AP*CP*CP*TP*GP*G)-3'), ... Authors: Shigdel, U, Verdine, G. Deposit date: 2020-03-03 Release date: 2020-09-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.38 Å) Cite: The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase. Nat Commun, 11, 2020
6W0R	Human 8-oxoguanine glycosylase interrogating fully intrahelical undamaged DNA Descriptor: 2-(2-ethoxyethoxy)ethanethiol, DNA (5'-D(P*CP*AP*GP*GP*TP*C)-3'), DNA (5'-D(P*CP*CP*TP*GP*G)-3'), ... Authors: Shigdel, U, Verdine, G. Deposit date: 2020-03-02 Release date: 2020-09-23 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.35 Å) Cite: The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase. Nat Commun, 11, 2020
7DXH	Cryo-EM structure of PSII intermediate Psb28-PSII complex Descriptor: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ... Authors: Sui, S.F, Shen, J.R, Han, G.Y, Xiao, Y.N, Huang, G.Q. Deposit date: 2021-01-18 Release date: 2021-06-30 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Structural insights into cyanobacterial photosystem II intermediates associated with Psb28 and Tsl0063. Nat.Plants, 7, 2021
7DXA	PSII intermediate Psb28-RC47 Descriptor: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ... Authors: Sui, S.F, Shen, J.R, Han, G.Y, Xiao, Y.N, Huang, G.Q. Deposit date: 2021-01-18 Release date: 2021-06-30 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Structural insights into cyanobacterial photosystem II intermediates associated with Psb28 and Tsl0063. Nat.Plants, 7, 2021
1C81	MICHAELIS COMPLEX OF FRUCTOSE-2,6-BISPHOSPHATASE Descriptor: 2,5-anhydro-1-deoxy-1-phosphono-6-O-phosphono-D-glucitol, FRUCTOSE-2,6-BISPHOSPHATASE Authors: Lee, Y.H, Olson, T.W, McClard, R.W, Witte, J.F, McFarlan, S.C, Banaszak, L.J, Levitt, D.G, Lange, A.J. Deposit date: 2000-04-03 Release date: 2003-06-10 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Reaction Mechanism of Fructose-2,6-bisphosphatase Suggested by the Crystal Structures of a pseudo-Michaelis complex and Metabolite Complexes To be Published
5A4A	Crystal structure of the OSK domain of Drosophila Oskar Descriptor: MATERNAL EFFECT PROTEIN OSKAR, SULFATE ION Authors: Jeske, M, Glatt, S, Ephrussi, A, Mueller, C.W. Deposit date: 2015-06-05 Release date: 2015-07-22 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.699 Å) Cite: The Crystal Structure of the Drosophila Germline Inducer Oskar Identifies Two Domains with Distinct Vasa Helicase-and RNA-Binding Activities. Cell Rep., 12, 2015
5A49	Crystal structure of the LOTUS domain (aa 139-222) of Drosophila Oskar in C222 Descriptor: MATERNAL EFFECT PROTEIN OSKAR Authors: Jeske, M, Glatt, S, Ephrussi, A, Mueller, C.W. Deposit date: 2015-06-05 Release date: 2015-07-22 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.098 Å) Cite: The Crystal Structure of the Drosophila Germline Inducer Oskar Identifies Two Domains with Distinct Vasa Helicase-and RNA-Binding Activities. Cell Rep., 12, 2015
1CD1	CD1(MOUSE) ANTIGEN PRESENTING MOLECULE Descriptor: CD1 Authors: Zeng, Z.H, Segelke, B.W, Wilson, I.A. Deposit date: 1997-04-02 Release date: 1997-10-15 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.67 Å) Cite: Crystal structure of mouse CD1: An MHC-like fold with a large hydrophobic binding groove. Science, 277, 1997
5AOR	Structure of MLE RNA ADP AlF4 complex Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP)-3', ADENOSINE-5'-DIPHOSPHATE, DOSAGE COMPENSATION REGULATOR, ... Authors: Prabu, J.R, Conti, E. Deposit date: 2015-09-11 Release date: 2015-11-18 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.08 Å) Cite: Structure of the RNA Helicase Mle Reveals the Molecular Mechanisms for Uridine Specificity and RNA-ATP Coupling. Mol.Cell, 60, 2015
4M9B	Crystal structure of Apo Ara h 8 Descriptor: Ara h 8 allergen, SODIUM ION Authors: Offermann, L.R, Hurlburt, B.K, Majorek, K.A, McBride, J.K, Maleki, S.J, Chruszcz, M. Deposit date: 2013-08-14 Release date: 2013-11-27 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure and Function of the Peanut Panallergen Ara h 8. J.Biol.Chem., 288, 2013
3VB1	Crystal Structure of Anopholes gambiae odorant binding protein 20 in open state Descriptor: ACETIC ACID, AGAP005208-PA Authors: Ziemba, B.P, Jones, D.N. Deposit date: 2011-12-30 Release date: 2012-10-17 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2 Å) Cite: A novel mechanism of ligand binding and release in the odorant binding protein 20 from the malaria mosquito Anopheles gambiae. Protein Sci., 22, 2013
5KLA	Crystal structure of the drosophila Pumilio RNA-binding domain in complex with hunchback RNA Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Maternal protein pumilio, ... Authors: Qiu, C, Hall, T.M.T. Deposit date: 2016-06-23 Release date: 2016-08-17 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.14 Å) Cite: Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio. Elife, 5, 2016
1D5M	X-RAY CRYSTAL STRUCTURE OF HLA-DR4 COMPLEXED WITH PEPTIDE AND SEB Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ENTEROTOXIN TYPE B, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, ... Authors: Swain, A.L, Crowther, R, Kammlott, U. Deposit date: 1999-10-07 Release date: 2000-06-28 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2 Å) Cite: Peptide and peptide mimetic inhibitors of antigen presentation by HLA-DR class II MHC molecules. Design, structure-activity relationships, and X-ray crystal structures. J.Med.Chem., 43, 2000
5L80	Structure of Exuperantia EXO-like and SAM-like domains Descriptor: Maternal protein exuperantia,Maternal protein exuperantia Authors: Lazzaretti, D, Veith, K, Bono, F. Deposit date: 2016-06-05 Release date: 2016-07-06 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.8 Å) Cite: The bicoid mRNA localization factor Exuperantia is an RNA-binding pseudonuclease. Nat.Struct.Mol.Biol., 23, 2016
1CIW	PEANUT LECTIN COMPLEXED WITH N-ACETYLLACTOSAMINE Descriptor: CALCIUM ION, MANGANESE (II) ION, PROTEIN (PEANUT LECTIN), ... Authors: Ravishankar, R, Suguna, K, Surolia, A, Vijayan, M. Deposit date: 1999-04-06 Release date: 1999-07-27 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structures of the complexes of peanut lectin with methyl-beta-galactose and N-acetyllactosamine and a comparative study of carbohydrate binding in Gal/GalNAc-specific legume lectins. Acta Crystallogr.,Sect.D, 55, 1999
5LBS	structural basis of Zika and Dengue virus potent antibody cross-neutralization Descriptor: 1,2-ETHANEDIOL, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8, SULFATE ION, ... Authors: Vaney, M.C, Rouvinski, A, Barba-Spaeth, G, Rey, F.A. Deposit date: 2016-06-17 Release date: 2016-07-06 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.41 Å) Cite: Structural basis of potent Zika-dengue virus antibody cross-neutralization. Nature, 536, 2016
1D5X	X-RAY CRYSTAL STRUCTURE OF HLA-DR4 COMPLEXED WITH DIPEPTIDE MIMETIC AND SEB Descriptor: DIPEPTIDE MIMETIC INHIBITOR, ENTEROTOXIN TYPE B, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN Authors: Swain, A, Crowther, R, Kammlott, U. Deposit date: 1999-10-12 Release date: 2000-06-28 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Peptide and peptide mimetic inhibitors of antigen presentation by HLA-DR class II MHC molecules. Design, structure-activity relationships, and X-ray crystal structures. J.Med.Chem., 43, 2000
4M63	Crystal Structure of a Filament-Like Actin Trimer Bound to the Bacterial Effector VopL Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-5C, CALCIUM ION, ... Authors: Tomchick, D.R, Zahm, J.A, Rosen, M.K. Deposit date: 2013-08-08 Release date: 2013-10-23 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.748 Å) Cite: The Bacterial Effector VopL Organizes Actin into Filament-like Structures. Cell(Cambridge,Mass.), 155, 2013
1D5Z	X-RAY CRYSTAL STRUCTURE OF HLA-DR4 COMPLEXED WITH PEPTIDOMIMETIC AND SEB Descriptor: PROTEIN (ENTEROTOXIN TYPE B), PROTEIN (HLA CLASS II HISTOCOMPATIBILITY ANTIGEN), PROTEIN (PEPTIDOMIMETIC INHIBITOR) Authors: Swain, A, Crowther, R, Kammlott, U. Deposit date: 1999-10-12 Release date: 2000-06-28 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Peptide and peptide mimetic inhibitors of antigen presentation by HLA-DR class II MHC molecules. Design, structure-activity relationships, and X-ray crystal structures. J.Med.Chem., 43, 2000

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