Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WQS
DownloadVisualize
BU of 5wqs by Molmil
Crystal structure of Apo Beta-Amylase from Sweet potato
Descriptor: Beta-amylase, ISOPROPYL ALCOHOL
Authors:Vajravijayan, S, Sergei, P, Nandhagopal, N, Gunasekaran, K.
Deposit date:2016-11-28
Release date:2017-12-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights on starch hydrolysis by plant beta-amylase and its evolutionary relationship with bacterial enzymes
Int. J. Biol. Macromol., 113, 2018
3I4I
DownloadVisualize
BU of 3i4i by Molmil
Crystal structure of a prokaryotic beta-1,3-1,4-glucanase (lichenase) derived from a mouse hindgut metagenome
Descriptor: 1,3-1,4-beta-glucanase, CALCIUM ION
Authors:Nakatani, Y, Nalder, T.D, Tannock, G.W, Cutfield, J.F, Jack, R.W, Carne, A.
Deposit date:2009-07-01
Release date:2010-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of a prokaryotic beta-1,3-1,4-glucanase (lichenase) derived from a mouse hindgut metagenome
To be Published
4RHZ
DownloadVisualize
BU of 4rhz by Molmil
Crystal structure of Cry23Aa1 and Cry37Aa1 binary protein complex
Descriptor: CALCIUM ION, Cry23AA1, Cry37AA1, ...
Authors:Rydel, T.J, Williams, J.M, Brown, G.R, Guzov, V.M, Sturman, E.J, Evdokimov, A.
Deposit date:2014-10-03
Release date:2015-10-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Associated Bacillus thuringiensis Binary Protein Complex of Cry23Aa1 and Cry37Aa1: Crystal Structure, Insecticidal Data, and Pore Formation Modeling.
To be Published
6F8R
DownloadVisualize
BU of 6f8r by Molmil
Crystal structure of the PDE4D catalytic domain in complex with GEBR-54
Descriptor: (2~{S})-1-[3-(3-cyclopentyloxy-4-methoxy-phenyl)pyrazol-1-yl]-3-morpholin-4-yl-propan-2-ol, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Prosdocimi, T, Donini, S, Parisini, E.
Deposit date:2017-12-13
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.826 Å)
Cite:Molecular Bases of PDE4D Inhibition by Memory-Enhancing GEBR Library Compounds.
Biochemistry, 57, 2018
6FDC
DownloadVisualize
BU of 6fdc by Molmil
Crystal structure of the PDE4D catalytic domain in complex with GEBR-32a
Descriptor: (2~{R})-1-[3-[4-[bis(fluoranyl)methoxy]-3-cyclopentyloxy-phenyl]pyrazol-1-yl]-3-morpholin-4-yl-propan-2-ol, (2~{S})-1-[5-[4-[bis(fluoranyl)methoxy]-3-cyclopentyloxy-phenyl]pyrazol-1-yl]-3-morpholin-4-yl-propan-2-ol, 1,2-ETHANEDIOL, ...
Authors:Prosdocimi, T, Donini, S, Parisini, E.
Deposit date:2017-12-22
Release date:2018-05-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Molecular Bases of PDE4D Inhibition by Memory-Enhancing GEBR Library Compounds.
Biochemistry, 57, 2018
1HQM
DownloadVisualize
BU of 1hqm by Molmil
CRYSTAL STRUCTURE OF THERMUS AQUATICUS CORE RNA POLYMERASE-INCLUDES COMPLETE STRUCTURE WITH SIDE-CHAINS (EXCEPT FOR DISORDERED REGIONS)-FURTHER REFINED FROM ORIGINAL DEPOSITION-CONTAINS ADDITIONAL SEQUENCE INFORMATION
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Minakhin, L, Bhagat, S, Brunning, A, Campbell, E.A, Darst, S.A, Ebright, R.H, Severinov, K.
Deposit date:2000-12-18
Release date:2001-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bacterial RNA polymerase subunit omega and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly.
Proc.Natl.Acad.Sci.USA, 98, 2001
5Z9A
DownloadVisualize
BU of 5z9a by Molmil
Crystal structure of chorismate synthase from Pseudomonas aeruginosa
Descriptor: Chorismate synthase
Authors:Iqbal, N, Chaudhary, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2018-02-02
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of chorismate synthase from Pseudomonas aeruginosa
To Be Published
5Z9E
DownloadVisualize
BU of 5z9e by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, DNA gyrase subunit B, PHOSPHATE ION, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-02
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9N
DownloadVisualize
BU of 5z9n by Molmil
S.aureus GyrB ATPase domain in complex with 4,6-dichloro-2-(methylthio)pyrimidine
Descriptor: 4,6-dichloro-2-(methylsulfanyl)pyrimidine, DNA gyrase subunit B, SULFATE ION
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
1UN0
DownloadVisualize
BU of 1un0 by Molmil
Crystal Structure of Yeast Karyopherin (Importin) alpha in complex with a Nup2p N-terminal fragment
Descriptor: IMPORTIN ALPHA SUBUNIT, NUCLEOPORIN NUP2
Authors:Matsuura, Y, Lange, A, Harreman, M.T, Corbett, A.H, Stewart, M.
Deposit date:2003-09-03
Release date:2003-10-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Nup2P Function in Cargo Release and Karyopherin Recycling in Nuclear Import
Embo J., 22, 2003
4P75
DownloadVisualize
BU of 4p75 by Molmil
PheRS in complex with compound 4a
Descriptor: 3-(3-methoxyphenyl)-5-(trifluoromethyl)-1H-pyrazole, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Ferguson, A.D.
Deposit date:2014-03-25
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:The role of a novel auxiliary pocket in bacterial phenylalanyl-tRNA synthetase druggability.
J.Biol.Chem., 289, 2014
3LM1
DownloadVisualize
BU of 3lm1 by Molmil
Crystal Structure Analysis of Maclura pomifera agglutinin complex with p-nitrophenyl-GalNAc
Descriptor: 4-nitrophenyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, Agglutinin alpha chain, Agglutinin beta-2 chain
Authors:Huang, J, Xu, Z, Wang, D, Ogato, C, Hirama, T, Palczewski, K, Hazen, S.L, Lee, X, Young, N.M.
Deposit date:2010-01-29
Release date:2010-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of the secondary binding sites of Maclura pomifera agglutinin by glycan array and crystallographic analyses.
Glycobiology, 20, 2010
6E8A
DownloadVisualize
BU of 6e8a by Molmil
Crystal structure of DcrB from Salmonella enterica at 1.92 Angstroms resolution
Descriptor: DUF1795 domain-containing protein
Authors:Rasmussen, D.M, Soens, R.W, Bhattacharyya, B, May, J.F.
Deposit date:2018-07-27
Release date:2018-10-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The structure of DcrB, a lipoprotein from Salmonella enterica, reveals flexibility in the N-terminal segment of the Mog1p/PsbP-like fold.
J. Struct. Biol., 204, 2018
3I4H
DownloadVisualize
BU of 3i4h by Molmil
Crystal structure of Cas6 in Pyrococcus furiosus
Descriptor: endoribonuclease
Authors:Carte, J, Wang, R, Li, H, Terns, R.M, Terns, M.P.
Deposit date:2009-07-01
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes
Genes Dev., 22, 2008
4TSH
DownloadVisualize
BU of 4tsh by Molmil
A Novel Protein Fold Forms an Intramolecular Lock to Stabilize the Tertiary Structure of Streptococcus mutans Adhesin P1
Descriptor: CALCIUM ION, MAGNESIUM ION, Surface protein adhesin
Authors:Heim, K.P, Kailasan, S, McKenna, R, Brady, L.J.
Deposit date:2014-06-18
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:An intramolecular lock facilitates folding and stabilizes the tertiary structure of Streptococcus mutans adhesin P1.
Proc.Natl.Acad.Sci.USA, 111, 2014
6G4A
DownloadVisualize
BU of 6g4a by Molmil
FLN5 (full length)
Descriptor: Gelation factor
Authors:Waudby, C.A, Wlodarski, T, Karyadi, M.-E, Cassaignau, A.M.E, Chan, S.H.S, Wentink, A.S, Schmidt-Engler, J.M, Camilloni, C, Vendruscolo, M, Cabrita, L.D, Christodoulou, J.
Deposit date:2018-03-27
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mapping energy landscapes of a growing filamin domain reveals an intermediate associated with proline isomerization during biosynthesis
To Be Published
3PQV
DownloadVisualize
BU of 3pqv by Molmil
Cyclase homolog
Descriptor: D(-)-TARTARIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Tanaka, N, Smith, P, Shuman, S.
Deposit date:2010-11-27
Release date:2011-04-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:Crystal structure of Rcl1, an essential component of the eukaryal pre-rRNA processosome implicated in 18s rRNA biogenesis.
Rna, 17, 2011
4J8Y
DownloadVisualize
BU of 4j8y by Molmil
E3_5 DARPin D77S mutant
Descriptor: DARPin_E3_5_D77S
Authors:Seeger, M.A, Gruetter, M.G.
Deposit date:2013-02-15
Release date:2013-08-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design, construction, and characterization of a second-generation DARPin library with reduced hydrophobicity.
Protein Sci., 22, 2013
5Z9F
DownloadVisualize
BU of 5z9f by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 2-hydroxybenzonitrile, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5Z9L
DownloadVisualize
BU of 5z9l by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 2-fluoro-4-hydroxybenzonitrile, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-02-03
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018
5VOE
DownloadVisualize
BU of 5voe by Molmil
DesGla-XaS195A Bound to Aptamer 11F7t
Descriptor: Aptamer 11F7t (36-MER), CALCIUM ION, Coagulation factor X, ...
Authors:Gunaratne, R, Kumar, S, Frederiksen, J.W, Stayrook, S, Lohrmann, J.L, Perry, K, Chabata, C.V, Thalji, N.K, Ho, M.D, Arepally, G, Camire, R.M, Krishnaswamy, S.K, Sullenger, B.A.
Deposit date:2017-05-02
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Combination of aptamer and drug for reversible anticoagulation in cardiopulmonary bypass.
Nat. Biotechnol., 36, 2018
4I4I
DownloadVisualize
BU of 4i4i by Molmil
Crystal Structure of Bacillus stearothermophilus Phosphofructokinase mutant T156A bound to PEP
Descriptor: 6-phosphofructokinase, PHOSPHOENOLPYRUVATE
Authors:Mosser, R, Reddy, M, Bruning, J.B, Sacchettini, J.C, Reinhart, G.D.
Deposit date:2012-11-27
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4948 Å)
Cite:Redefining the Role of the Quaternary Shift in Bacillus stearothermophilus Phosphofructokinase.
Biochemistry, 52, 2013
4RAK
DownloadVisualize
BU of 4rak by Molmil
Crystal structure of nuclear receptor subfamily 1, group h, member 2 (lxrb) complexed with partial agonist
Descriptor: 1,4-BUTANEDIOL, 2-{2-[2-(2-chlorophenyl)propan-2-yl]-1-[3'-(methylsulfonyl)biphenyl-4-yl]-1H-imidazol-4-yl}propan-2-ol, Oxysterols receptor LXR-beta
Authors:Nanao, M.
Deposit date:2014-09-10
Release date:2014-12-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Liver X Receptor (LXR) partial agonists: Biaryl pyrazoles and imidazoles displaying a preference for LXR beta.
Bioorg.Med.Chem.Lett., 25, 2015
5W3K
DownloadVisualize
BU of 5w3k by Molmil
Crystal structure of Staphylococcus aureus ketol-acid reductoisomerase in complex NADPH, Mg2+ and CPD
Descriptor: Ketol-acid reductoisomerase (NADP(+)), MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Patel, K.M, Teran, D, Zheng, S, Kandale, A, Schembri, M, McGeary, R.P, Schenk, G, Guddat, L.W.
Deposit date:2017-06-08
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.589 Å)
Cite:Crystal Structures of Staphylococcus aureus Ketol-Acid Reductoisomerase in Complex with Two Transition State Analogues that Have Biocidal Activity.
Chemistry, 23, 2017
5Z4O
DownloadVisualize
BU of 5z4o by Molmil
Bacterial GyrB ATPase domain in complex with a chemical fragment
Descriptor: 1H-benzimidazol-2-amine, 4-phenoxyphenol, DNA gyrase subunit B, ...
Authors:Huang, X, Zhou, H.
Deposit date:2018-01-12
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Identification of an auxiliary druggable pocket in the DNA gyrase ATPase domain using fragment probes
Medchemcomm, 9, 2018

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon