3NPQ
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3NPN
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1HJI
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![BU of 1hji by Molmil](/molmil-images/mine/1hji) | BACTERIOPHAGE HK022 NUN-PROTEIN-NUTBOXB-RNA COMPLEX | Descriptor: | NUN-PROTEIN, RNA (5-R(P*GP*CP*CP*CP*UP*GP*AP*AP*AP*AP*AP*GP*GP*GP*C)-3) | Authors: | Faber, C, Schaerpf, M, Becker, T, Sticht, H, Roesch, P. | Deposit date: | 2001-01-15 | Release date: | 2002-01-29 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The Structure of the Coliphage Hk022 Nun Protein-Lambda-Phage Boxb RNA Complex. Implications for the Mechanism of Transcription Termination J.Biol.Chem., 276, 2001
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5HNQ
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1EGK
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![BU of 1egk by Molmil](/molmil-images/mine/1egk) | CRYSTAL STRUCTURE OF A NUCLEIC ACID FOUR-WAY JUNCTION | Descriptor: | 10-23 DNA ENZYME, MAGNESIUM ION, RNA (5'-R(*AP*GP*GP*AP*GP*AP*GP*AP*GP*AP*UP*GP*GP*GP*UP*GP*CP*GP*AP*G)-3') | Authors: | Nowakowski, J, Shim, P.J, Stout, C.D, Joyce, G.F. | Deposit date: | 2000-02-15 | Release date: | 2000-06-26 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Alternative conformations of a nucleic acid four-way junction. J.Mol.Biol., 300, 2000
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1K1G
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![BU of 1k1g by Molmil](/molmil-images/mine/1k1g) | STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1 | Descriptor: | 5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3', SF1-Bo isoform | Authors: | Liu, Z, Luyten, I, Bottomley, M.J, Messias, A.C, Houngninou-Molango, S, Sprangers, R, Zanier, K, Kramer, A, Sattler, M. | Deposit date: | 2001-09-25 | Release date: | 2001-11-07 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structural basis for recognition of the intron branch site RNA by splicing factor 1. Science, 294, 2001
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3NYB
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8FEO
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8FEQ
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2I7E
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2KP4
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![BU of 2kp4 by Molmil](/molmil-images/mine/2kp4) | Structure of 2'F-ANA/RNA hybrid duplex | Descriptor: | DNA (5'-D(*(GFL)P*(CFL)P*(TAF)P*(A5L)P*(TAF)P*(A5L)P*(A5L)P*(TAF)P*(GFL)P*(GFL))-3'), RNA (5'-R(*CP*CP*AP*UP*UP*AP*UP*AP*GP*C)-3') | Authors: | Gonzalez, C, Martin-Pintado, N, Watts, J, Gomez-Pinto, I, Dhama, M, Orozco, M, Schwartzentruber, J, Portella, G. | Deposit date: | 2009-10-06 | Release date: | 2010-02-09 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Differential stability of 2'F-ANA*RNA and ANA*RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility. Nucleic Acids Res., 38, 2010
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2HVQ
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![BU of 2hvq by Molmil](/molmil-images/mine/2hvq) | Structure of Adenylated full-length T4 RNA Ligase 2 | Descriptor: | Hypothetical 37.6 kDa protein in Gp24-hoc intergenic region, MAGNESIUM ION | Authors: | Nandakumar, J, Lima, C.D. | Deposit date: | 2006-07-30 | Release date: | 2006-10-17 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward. Cell(Cambridge,Mass.), 127, 2006
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4BHH
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![BU of 4bhh by Molmil](/molmil-images/mine/4bhh) | Crystal structure of tetramer of La Crosse virus nucleoprotein in complex with ssRNA | Descriptor: | NUCLEOPROTEIN, POLY-URIDINE 45-MER | Authors: | Reguera, J, Malet, H, Weber, F, Cusack, S. | Deposit date: | 2013-04-03 | Release date: | 2013-04-24 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (3.4 Å) | Cite: | Structural Basis for Encapsidation of Genomic RNA by La Crosse Orthobunyavirus Nucleoprotein. Proc.Natl.Acad.Sci.USA, 110, 2013
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2KX5
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![BU of 2kx5 by Molmil](/molmil-images/mine/2kx5) | Recognition of HIV TAR RNA by peptide mimetic of Tat protein | Descriptor: | Cyclic peptide mimetic of Tat protein, HIV TAR RNA | Authors: | Davidson, A, Patora-Komisarska, K, Robinson, J, Varani, G. | Deposit date: | 2010-04-26 | Release date: | 2010-07-07 | Last modified: | 2011-07-13 | Method: | SOLUTION NMR | Cite: | Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein. Nucleic Acids Res., 39, 2011
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4D25
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![BU of 4d25 by Molmil](/molmil-images/mine/4d25) | Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA and AMPPNP | Descriptor: | 5'-R(*UP*GP*AP*CP*AP*UP)-3', BMVLG PROTEIN, GLYCEROL, ... | Authors: | Spinelli, P, Pillai, R.S, Kadlec, J, Cusack, S. | Deposit date: | 2014-05-07 | Release date: | 2014-06-18 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts. Cell(Cambridge,Mass.), 157, 2014
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2R7S
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![BU of 2r7s by Molmil](/molmil-images/mine/2r7s) | Crystal Structure of Rotavirus SA11 VP1 / RNA (UGUGCC) complex | Descriptor: | PHOSPHATE ION, RNA (5'-R(*UP*GP*UP*GP*CP*C)-3'), RNA-dependent RNA polymerase | Authors: | Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L. | Deposit date: | 2007-09-10 | Release date: | 2008-07-29 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (3.24 Å) | Cite: | Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure, 16, 2008
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2R7X
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![BU of 2r7x by Molmil](/molmil-images/mine/2r7x) | Crystal Structure of Rotavirus SA11 VP1/RNA (UGUGACC)/GTP complex | Descriptor: | GUANOSINE-5'-TRIPHOSPHATE, RNA (5'-R(*UP*GP*UP*GP*AP*CP*C)-3'), RNA-dependent RNA polymerase | Authors: | Lu, X, Harrison, S.C, Tao, Y.J, Patton, J.T, Nibert, M.L. | Deposit date: | 2007-09-10 | Release date: | 2008-07-29 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1. Structure, 16, 2008
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8BS7
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1XOK
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![BU of 1xok by Molmil](/molmil-images/mine/1xok) | crystal structure of alfalfa mosaic virus RNA 3'UTR in complex with coat protein N terminal peptide | Descriptor: | BROMIDE ION, Coat protein, alfalfa mosaic virus RNA 3' UTR | Authors: | Guogas, L.M, Filman, D.J, Hogle, J.M, Gehrke, L. | Deposit date: | 2004-10-06 | Release date: | 2005-01-04 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Cofolding organizes alfalfa mosaic virus RNA and coat protein for replication. Science, 306, 2004
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1D4R
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![BU of 1d4r by Molmil](/molmil-images/mine/1d4r) | 29-mer fragment of human srp rna helix 6 | Descriptor: | 29-MER OF MODIFIED SRP RNA HELIX 6, MAGNESIUM ION | Authors: | Wild, K, Weichenrieder, O, Leonard, G.A, Cusack, S. | Deposit date: | 1999-10-05 | Release date: | 1999-12-02 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The 2 A structure of helix 6 of the human signal recognition particle RNA Structure Fold.Des., 7, 1999
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462D
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![BU of 462d by Molmil](/molmil-images/mine/462d) | CRYSTAL STRUCTURE OF THE HIV-1 GENOMIC RNA DIMERIZATION INITIATION SITE | Descriptor: | MAGNESIUM ION, RNA (5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G) -3') | Authors: | Ennifar, E, Yusupov, M, Walter, P, Marquet, R, Ehresmann, C, Ehresmann, B, Dumas, P. | Deposit date: | 1999-03-18 | Release date: | 1999-12-02 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges. Structure Fold.Des., 7, 1999
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1L9A
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![BU of 1l9a by Molmil](/molmil-images/mine/1l9a) | CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA | Descriptor: | MAGNESIUM ION, METHYL MERCURY ION, SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN, ... | Authors: | Oubridge, C, Kuglstatter, A, Jovine, L, Nagai, K. | Deposit date: | 2002-03-22 | Release date: | 2002-06-28 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Crystal structure of SRP19 in complex with the S domain of SRP RNA and its implication for the assembly of the signal recognition particle. Mol.Cell, 9, 2002
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1JO7
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![BU of 1jo7 by Molmil](/molmil-images/mine/1jo7) | Solution Structure of Influenza A Virus Promoter | Descriptor: | Influenza A virus promoter RNA | Authors: | Bae, S.-H, Cheong, H.-K, Lee, J.-H, Cheong, C, Kainosho, M, Choi, B.-S. | Deposit date: | 2001-07-27 | Release date: | 2001-09-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structural features of an influenza virus promoter and their implications for viral RNA synthesis. Proc.Natl.Acad.Sci.USA, 98, 2001
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4D26
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![BU of 4d26 by Molmil](/molmil-images/mine/4d26) | Crystal structure of the Bombyx mori Vasa helicase (E339Q) in complex with RNA,ADP and Pi | Descriptor: | 5'-R(*UP*GP*AP*CP*AP*UP)-3', ADENOSINE-5'-DIPHOSPHATE, BMVLG PROTEIN, ... | Authors: | Spinelli, P, Pillai, R.S, Kadlec, J, Cusack, S. | Deposit date: | 2014-05-07 | Release date: | 2014-06-18 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | RNA Clamping by Vasa Assembles a Pirna Amplifier Complex on Transposon Transcripts. Cell(Cambridge,Mass.), 157, 2014
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283D
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![BU of 283d by Molmil](/molmil-images/mine/283d) | A CURVED RNA HELIX INCORPORATING AN INTERNAL LOOP WITH G-A AND A-A NON-WATSON-CRICK BASE PAIRING | Descriptor: | MANGANESE (II) ION, RNA (5'-R(*GP*GP*CP*CP*GP*AP*AP*AP*GP*GP*CP*C)-3') | Authors: | Baeyens, K.J, De Bondt, H.L, Pardi, A, Holbrook, S.R. | Deposit date: | 1996-09-03 | Release date: | 1996-09-30 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | A curved RNA helix incorporating an internal loop with G.A and A.A non-Watson-Crick base pairing. Proc.Natl.Acad.Sci.USA, 93, 1996
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