PDB: 9760 resultsInfo pagesStatus searchChemie searchBIRD

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7SKZ	Crystal Structure of VN01H1 Fab in complex with SARS-CoV-2 S fusion peptide Descriptor: Heavy chain of VN01H1 Fab, Light chain of VN01H1 Fab, PRO-SER-LYS-ARG-SER-PHE-ILE-GLU-ASP-LEU-LEU-PHE-ASN Authors: Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2021-10-22 Release date: 2022-07-20 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.86 Å) Cite: ACE2-binding exposes the SARS-CoV-2 fusion peptide to broadly neutralizing coronavirus antibodies. Science, 377, 2022
7F3Q	SARS-CoV-2 RBD in complex with A5-10 Fab and A34-2 Fab Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of A34-2 Fab, ... Authors: Dou, Y, Wang, X, Liu, P, Lu, B, Wang, K. Deposit date: 2021-06-16 Release date: 2022-06-22 Last modified: 2024-01-24 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Development of neutralizing antibodies against SARS-CoV-2, using a high-throughput single-B-cell cloning method. Antib Ther, 6, 2023
7YVN	Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH281 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVP	Omicron BA.4/5 SARS-CoV-2 S in complex with TH272/281 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH272 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVG	Omicron BA.4/5 SARS-CoV-2 S in complex with TH132 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH132 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVK	Omicron BA.4/5 SARS-CoV-2 S in complex with TH272 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH272 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVO	Omicron BA.4/5 SARS-CoV-2 S in complex with TH027/132 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH132 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVE	Omicron BA.4/5 SARS-CoV-2 S in complex with TH027 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH027 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVH	Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH132 Fab Descriptor: Spike glycoprotein, TH132 Fab heavy chain, TH132 Fab light chain Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVM	Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH272 Fab Descriptor: Spike glycoprotein, TH281 Fab heavy chain, TH281 Fab light chain Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVF	Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH027 Fab Descriptor: Spike glycoprotein, TH027 Fab heavy chain, TH027 Fab light chain Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVJ	Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH236 Fab Descriptor: Spike glycoprotein, TH236 Fab heavy chain, TH236 Fab light chain Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVL	Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH272 Fab Descriptor: Spike glycoprotein, TH272 Fab heavy chain, TH272 Fab light chain Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7YVI	Omicron BA.4/5 SARS-CoV-2 S in complex with TH236 Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TH236 Fab heavy chain, ... Authors: Guo, Y, Zhang, G, Liang, J, Liu, F, Rao, Z. Deposit date: 2022-08-19 Release date: 2023-06-28 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Discovery and characterization of potent pan-variant SARS-CoV-2 neutralizing antibodies from individuals with Omicron breakthrough infection. Nat Commun, 14, 2023
7K7Y	Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E9 Descriptor: Botulinum neurotoxin type E, JLE-E9 Authors: Lam, K, Jin, R. Deposit date: 2020-09-24 Release date: 2020-10-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Two VHH Antibodies Neutralize Botulinum Neurotoxin E1 by Blocking Its Membrane Translocation in Host Cells. Toxins, 12, 2020
7Z3A	AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACS101 heavy chain, ... Authors: van Schooten, J, Ward, A. Deposit date: 2022-03-02 Release date: 2022-08-10 Last modified: 2022-08-17 Method: ELECTRON MICROSCOPY (3.95 Å) Cite: Identification of IOMA-class neutralizing antibodies targeting the CD4-binding site on the HIV-1 envelope glycoprotein. Nat Commun, 13, 2022
7K84	Crystal structure of BoNT/E LC-HN domain in complex with VHH JLE-E5 Descriptor: Botulinum neurotoxin type E, JLE-E5, SULFATE ION, ... Authors: Lam, K, Jin, R. Deposit date: 2020-09-25 Release date: 2020-10-14 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Two VHH Antibodies Neutralize Botulinum Neurotoxin E1 by Blocking Its Membrane Translocation in Host Cells. Toxins, 12, 2020
7DNH	2-fold subparticles refinement of human papillomavirus type 58 pseudovirus in complexed with the Fab fragment of 2H3 Descriptor: Major capsid protein L1, The heavy chain of 2H3 Fab fragment, The light chain of 2H3 Fab fragment Authors: He, M.Z, Chi, X, Zha, Z.H, Zheng, Q.B, Gu, Y, Li, S.W, Xia, N.S. Deposit date: 2020-12-09 Release date: 2020-12-30 Last modified: 2022-12-07 Method: ELECTRON MICROSCOPY (3.64 Å) Cite: Structural basis for the shared neutralization mechanism of three classes of human papillomavirus type 58 antibodies with disparate modes of binding. J.Virol., 95, 2021
7DNK	2-fold subparticles refinement of human papillomavirus type 58 pseudovirus in complexed with the Fab fragment of 5G9 Descriptor: Major capsid protein L1, The heavy chain of 5G9 Fab fragment, The light chain of 5G9 Fab fragment Authors: He, M.Z, Chi, X, Zha, Z.H, Zheng, Q.B, Gu, Y, Li, S.W, Xia, N.S. Deposit date: 2020-12-09 Release date: 2020-12-30 Last modified: 2022-12-07 Method: ELECTRON MICROSCOPY (6.41 Å) Cite: Structural basis for the shared neutralization mechanism of three classes of human papillomavirus type 58 antibodies with disparate modes of binding. J.Virol., 95, 2021
7DNL	2-fold subparticles refinement of human papillomavirus type 58 pseudovirus in complexed with the Fab fragment of A4B4 Descriptor: Major capsid protein L1, The heavy chain of 2H3 Fab fragment, The light chain of A4B4 Fab fragment Authors: He, M.Z, Chi, X, Zha, Z.H, Zheng, Q.B, Gu, Y, Li, S.W, Xia, N.S. Deposit date: 2020-12-09 Release date: 2020-12-30 Last modified: 2022-12-07 Method: ELECTRON MICROSCOPY (4.19 Å) Cite: Structural basis for the shared neutralization mechanism of three classes of human papillomavirus type 58 antibodies with disparate modes of binding. J.Virol., 95, 2021
7M1H	Crystal structure of LC/A-JPU-C10-JPU-D12-JPU-B8-JPU-G3-ciA-F12-ciA-D12 Descriptor: Botulinum neurotoxin A light chain, JPU-B8, JPU-C10, ... Authors: Lam, K, Jin, R. Deposit date: 2021-03-13 Release date: 2021-12-22 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.78 Å) Cite: Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies. Plos Pathog., 18, 2022
7U0A	Crystal Structure of C77G12 Fab in complex with SARS-CoV-2 S fusion peptide Descriptor: CHLORIDE ION, Heavy chain Fab C77G12, Light chain Fab C77G12, ... Authors: Tortorici, M.A, Veesler, D. Deposit date: 2022-02-17 Release date: 2022-08-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.7 Å) Cite: ACE2-binding exposes the SARS-CoV-2 fusion peptide to broadly neutralizing coronavirus antibodies. Science, 377, 2022
7U09	Crystal Structure of C13B8 Fab in complex with SARS-CoV-2 S fusion peptide Descriptor: Heavy chain Fab C13B8, Light chain Fab C13B8, SARS-CoV-2 S fusion peptide Authors: Tortorici, M.A, Veesler, D. Deposit date: 2022-02-17 Release date: 2022-08-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.1 Å) Cite: ACE2-binding exposes the SARS-CoV-2 fusion peptide to broadly neutralizing coronavirus antibodies. Science, 377, 2022
7U0E	Crystal Structure of C13C9 Fab in complex with SARS-CoV-2 S fusion peptide Descriptor: Heavy chain Fab C13C9, Light chain Fab C13C9, SARS-CoV-2 S fusion peptide Authors: Tortorici, M.A, Veesler, D. Deposit date: 2022-02-18 Release date: 2022-08-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.1 Å) Cite: ACE2-binding exposes the SARS-CoV-2 fusion peptide to broadly neutralizing coronavirus antibodies. Science, 377, 2022
7NA9	Crystal structure of BoNT/B-LC-JSG-C1 Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin type B, JSG-C1, ... Authors: Lam, K, Jin, R. Deposit date: 2021-06-20 Release date: 2021-12-22 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies. Plos Pathog., 18, 2022

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