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2O3K
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Yeast Cytosine Deaminase D92E Triple Mutant bound to transition state analogue HPY
Descriptor: 4-HYDROXY-3,4-DIHYDRO-1H-PYRIMIDIN-2-ONE, CALCIUM ION, Cytosine deaminase, ...
Authors:Korkegian, A.M, Stoddard, B.L.
Deposit date:2006-12-01
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Yeast Cytosine Deaminase D92E Triple Mutant bound to transition state analogue HPY
To be Published
2O3L
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Crystal structure of a duf1048 protein with a left-handed superhelix fold (bce_3448) from bacillus cereus atcc 10987 at 2.05 A resolution
Descriptor: GLYCEROL, Hypothetical protein, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-12-01
Release date:2006-12-19
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of hypothetical protein (NP_979748.1) from Bacillus cereus ATCC 10987 at 2.05 A resolution
To be published
2O3M
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Monomeric G-DNA tetraplex from human C-kit promoter
Descriptor: 5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3'
Authors:Phan, A.T, Kuryavyi, V.V, Burge, S, Neidle, S, Patel, D.J.
Deposit date:2006-12-01
Release date:2007-05-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter.
J.Am.Chem.Soc., 129, 2007
2O3O
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Crystal Structure of the sensor histidine kinase regulator YycI from Bacillus subtitlis
Descriptor: CHLORIDE ION, YycI protein
Authors:Santelli, E, Liddington, R.C.
Deposit date:2006-12-01
Release date:2007-04-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:The Crystal Structure of Bacillus subtilis YycI Reveals a Common Fold for Two Members of an Unusual Class of Sensor Histidine Kinase Regulatory Proteins.
J.Bacteriol., 189, 2007
2O3P
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Crystal structure of Pim1 with Quercetin
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Holder, S, Zemskova, M, Zhang, C, Tabrizizad, M, Bremer, R, Neidigh, J.W, Lilly, M.B.
Deposit date:2006-12-01
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Characterization of a potent and selective small-molecule inhibitor of the PIM1 kinase.
Mol.Cancer Ther., 6, 2007
2O3Q
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
Descriptor: ADP-ribosyl cyclase 1, CYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
Deposit date:2006-12-01
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
2O3R
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
Descriptor: ADP-ribosyl cyclase 1, CYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
Deposit date:2006-12-01
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
2O3S
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
Descriptor: ADP-ribosyl cyclase 1, CYCLIC ADENOSINE DIPHOSPHATE-RIBOSE
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
Deposit date:2006-12-01
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
2O3T
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
Descriptor: ADP-ribosyl cyclase 1, CYCLIC GUANOSINE DIPHOSPHATE-RIBOSE
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
Deposit date:2006-12-01
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
2O3U
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Structural Basis for Formation and Hydrolysis of Calcium Messenger Cyclic ADP-ribose by Human CD38
Descriptor: 3-(AMINOCARBONYL)-1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3S,4R,5R)-5-(2-AMINO-6-OXO-1,6-DIHYDRO-9H-PURIN-9-YL)-3,4-DIHYD ROXYTETRAHYDROFURAN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]OXY}METHYL)-3,4-DIHYDROXYTETRAHYDROFURAN-2- YL]PYRIDINIUM, ADP-ribosyl cyclase 1
Authors:Liu, Q, Kriksunov, I.A, Graeff, R, Lee, H.C, Hao, Q.
Deposit date:2006-12-01
Release date:2006-12-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural basis for formation and hydrolysis of the calcium messenger cyclic ADP-ribose by human CD38
J.Biol.Chem., 282, 2007
2O3V
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Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33
Descriptor: (2S,3R,4R,5S,6R)-3-AMINO-4-({[(2S,3R,4R,5S,6R)-3-AMINO-2-{[(1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYL]OXY}-5-HYDROXY-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-4-YL]OXY}METHOXY)-6-(HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2,5-DIOL, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kondo, J, Hainrichson, M, Nudelman, I, Shallom-Shezifi, D, Baasov, T, Westhof, E.
Deposit date:2006-12-02
Release date:2007-11-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites.
Chembiochem, 8, 2007
2O3W
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Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycin
Descriptor: PAROMOMYCIN, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kondo, J, Hainrichson, M, Nudelman, I, Shallom-Shezifi, D, Baasov, T, Westhof, E.
Deposit date:2006-12-02
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites.
Chembiochem, 8, 2007
2O3X
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Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30
Descriptor: (1R,2R,3S,4R,6S)-4,6-DIAMINO-2-[(5-AMINO-5-DEOXY-BETA-D-RIBOFURANOSYL)OXY]-3-HYDROXYCYCLOHEXYL 2-AMINO-2-DEOXY-ALPHA-D-GLUCOPYRANOSIDE, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kondo, J, Hainrichson, M, Nudelman, I, Shallom-Shezifi, D, Baasov, T, Westhof, E.
Deposit date:2006-12-02
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites.
Chembiochem, 8, 2007
2O3Y
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Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in Presence of Paromamine Derivative NB30
Descriptor: RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3'), SPERMINE
Authors:Kondo, J, Hainrichson, M, Nudelman, I, Shallom-Shezifi, D, Baasov, T, Westhof, E.
Deposit date:2006-12-02
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Differential Selectivity of Natural and Synthetic Aminoglycosides towards the Eukaryotic and Prokaryotic Decoding A Sites.
Chembiochem, 8, 2007
2O3Z
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X-ray crystal structure of LpxC complexed with 3-heptyloxybenzoate
Descriptor: 3-(heptyloxy)benzoic acid, CHLORIDE ION, SULFATE ION, ...
Authors:Gennadios, H.A, Whittington, D.A, Christianson, D.W.
Deposit date:2006-12-02
Release date:2007-02-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Amphipathic benzoic acid derivatives: synthesis and binding in the hydrophobic tunnel of the zinc deacetylase LpxC.
Bioorg.Med.Chem., 15, 2007
2O40
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Crystal Structure of a Chemically Synthesized 203 Amino Acid 'Covalent Dimer' HIV-1 Protease Molecule
Descriptor: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, covalent dimer HIV-1 protease
Authors:Torbeev, V.Y, Kent, S.B.H.
Deposit date:2006-12-02
Release date:2006-12-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Convergent chemical synthesis and crystal structure of a 203 amino acid "covalent dimer" HIV-1 protease enzyme molecule.
Angew.Chem.Int.Ed.Engl., 46, 2007
2O42
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Crystal Structure of M11L, Bcl-2 homolog from myxoma virus
Descriptor: M11L protein
Authors:Douglas, A.E.
Deposit date:2006-12-02
Release date:2007-03-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structure of M11L: A myxoma virus structural homolog of the apoptosis inhibitor, Bcl-2.
Protein Sci., 16, 2007
2O43
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Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide erythromycylamine
Descriptor: (3R,4S,5S,6R,7R,9R,10S,11S,12R,13S,14R)-10-AMINO-6-{[(2S,3R,4S,6R)-4-(DIMETHYLAMINO)-3-HYDROXY-6-METHYLTETRAHYDRO-2H-PY RAN-2-YL]OXY}-14-ETHYL-7,12,13-TRIHYDROXY-4-{[(2R,4R,5S,6S)-5-HYDROXY-4-METHOXY-4,6-DIMETHYLTETRAHYDRO-2H-PYRAN-2-YL]OXY }-3,5,7,9,11,13-HEXAMETHYLOXACYCLOTETRADECAN-2-ONE, 23S rRNA
Authors:Pyetan, E, Baram, D, Auerbach-Nevo, T, Yonath, A.
Deposit date:2006-12-03
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Chemical parameters influencing fine tuning in the binding of Macrolide antibiotics to the ribosomal tunnel
TO BE PUBLISHED
2O44
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Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin
Descriptor: (2S,3S,4R,6S)-6-{[(2R,3S,4R,5R,6S)-6-{[(4R,5S,6S,7R,9R,10S,12E,14Z,16R)-4-(ACETYLOXY)-10-HYDROXY-5-METHOXY-9,16-DIMETHYL-2-OXO-7-(2-OXOETHYL)OXACYCLOHEXADECA-12,14-DIEN-6-YL]OXY}-4-(DIMETHYLAMINO)-5-HYDROXY-2-METHYLTETRAHYDRO-2H-PYRAN-3-YL]OXY}-4-HYDROXY-2,4-DIMETHYLTETRAHYDRO-2H-PYRAN-3-YL 3-METHYLBUTANOATE, 23S rRNA
Authors:Pyetan, E, Daram, D, Auerbach-Nevo, T, Yonath, A.
Deposit date:2006-12-03
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Chemical parameters influencing fine tuning in the binding of Macrolide antibiotics to the ribosomal tunnel
TO BE PUBLISHED
2O45
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Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874
Descriptor: (3AS,4R,7R,8S,9S,10R,11R,13R,15R,15AR)-4-ETHYL-11-METHOXY-3A,7,9,11,13,15-HEXAMETHYL-2,6,14-TRIOXO-1-[4-(4-PYRIDIN-3-YL-1H-IMIDAZOL-1-YL)BUTYL]-10-{[3,4,6-TRIDEOXY-3-(DIMETHYLAMINO)-BETA-D-XYLO-HEXOPYRANOSYL]OXY}TETRADECAHYDRO-2H-OXACYCLOTETRADECINO[4,3-D][1,3]OXAZOL-8-YL 2,6-DIDEOXY-3-C-METHYL-3-O-METHYL-ALPHA-L-RIBO-HEXOPYRANOSIDE, 23S rRNA
Authors:Baram, D, Pyetan, E, Auerbach-Nevo, T, Yonath, A.
Deposit date:2006-12-03
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Chemical Parameters Influencing Fine Tuning in the Binding of Macrolide Antibiotics to the Ribosomal Tunnel
TO BE PUBLISHED
2O48
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Crystal structure of Mammalian Dimeric Dihydrodiol Dehydrogenase
Descriptor: BETA-MERCAPTOETHANOL, Dimeric dihydrodiol dehydrogenase, P-HYDROXYACETOPHENONE, ...
Authors:Carbone, V, El-Kabbani, O.
Deposit date:2006-12-04
Release date:2007-07-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structures of dimeric dihydrodiol dehydrogenase apoenzyme and inhibitor complex: probing the subunit interface with site-directed mutagenesis.
Proteins, 70, 2008
2O49
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Crystal Structure of the N-terminal CUT domain of SATB1 Bound to Matrix Attachment Region DNA
Descriptor: DNA (5'-D(*DGP*DCP*DAP*DTP*DAP*DTP*DAP*DTP*DTP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DAP*DTP*DAP*DTP*DAP*DTP*DGP*DC)-3'), DNA-binding protein SATB1
Authors:Yamasaki, K, Akiba, T, Harata, K.
Deposit date:2006-12-04
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for recognition of the matrix attachment region of DNA by transcription factor SATB1.
Nucleic Acids Res., 35, 2007
2O4A
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BU of 2o4a by Molmil
Crystal Structure of the N-terminal CUT Domain of SATB1 Bound to Matrix Attachment Region DNA
Descriptor: DNA (5'-D(*DGP*DCP*DAP*DTP*DAP*DTP*DAP*DTP*DTP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DAP*DTP*DAP*DTP*DAP*DTP*DGP*DC)-3'), DNA-binding protein SATB1
Authors:Yamasaki, K, Akiba, T, Harata, K.
Deposit date:2006-12-04
Release date:2007-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for recognition of the matrix attachment region of DNA by transcription factor SATB1.
Nucleic Acids Res., 35, 2007
2O4C
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Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
Descriptor: Erythronate-4-phosphate dehydrogenase, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Ha, J.Y, Lee, J.H, Kim, K.H, Kim, D.J, Lee, H.H, Kim, H.K, Yoon, H.J, Suh, S.W.
Deposit date:2006-12-04
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of d-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
J.Mol.Biol., 366, 2007
2O4D
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Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa
Descriptor: Hypothetical protein PA0269
Authors:McGrath, T.E, Battaile, K, Kisselman, G, Romanov, V, Wu-Brown, J, Virag, C, Ng, I, Kimber, M, Edwards, A.M, Pai, E.F, Chirgadze, N.Y.
Deposit date:2006-12-04
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa
To be Published

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