Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4W76
DownloadVisualize
BU of 4w76 by Molmil
Crystal Structure of Full-Length Split GFP Mutant D21H/K26C Disulfide and Metal-Mediated Dimer, P 21 21 21 Space Group, Form 2
Descriptor: COPPER (II) ION, fluorescent protein D21H/K26C
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-21
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
5ZJ9
DownloadVisualize
BU of 5zj9 by Molmil
human D-amino acid oxidase complexed with 5-chlorothiophene-3-carboxylic acid
Descriptor: 5-chloro thiophene-3-carboxylic acid, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kato, Y, Hin, N, Maita, N, Thomas, A.G, Kurosawa, S, Rojas, C, Yorita, K, Slusher, B.S, Fukui, K, Tsukamoto, T.
Deposit date:2018-03-19
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for potent inhibition of d-amino acid oxidase by thiophene carboxylic acids
Eur J Med Chem, 159, 2018
4W7E
DownloadVisualize
BU of 4w7e by Molmil
Crystal Structure of Full-Length Split GFP Mutant E124H/K126H With Copper Mediated Crystal Contacts, P 41 21 2 Space Group
Descriptor: COPPER (II) ION, IMIDAZOLE, fluorescent protein D21H/K26H
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-21
Release date:2015-02-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.592 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W7R
DownloadVisualize
BU of 4w7r by Molmil
Crystal Structure of Full-Length Split GFP Mutant E124H/K126H Copper Mediated Dimer, P 21 Space Group
Descriptor: 1,2-ETHANEDIOL, COPPER (II) ION, fluorescent protein E124H/K126C
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-22
Release date:2015-03-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
5YVL
DownloadVisualize
BU of 5yvl by Molmil
Crystal structure of a cyclase Hpiu5 from Fischerella sp. ATCC 43239
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, cyclase
Authors:Hu, X.Y, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2017-11-26
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.059 Å)
Cite:The Crystal Structure of a Class of Cyclases that Catalyze the Cope Rearrangement
Angew. Chem. Int. Ed. Engl., 57, 2018
4W6B
DownloadVisualize
BU of 4w6b by Molmil
Crystal Structure of a Superfolder GFP Mutant K26C Disulfide Dimer, P 21 21 21 Space Group
Descriptor: CHLORIDE ION, MAGNESIUM ION, fluorescent protein K26C
Authors:Pashkov, I, Sawaya, M.R, Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-20
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6G
DownloadVisualize
BU of 4w6g by Molmil
Crystal Structure of Full-Length Split GFP Mutant D190C Disulfide Dimer, P 61 Space Group
Descriptor: fluorescent protein D190C
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-20
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.024 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6J
DownloadVisualize
BU of 4w6j by Molmil
Crystal Structure of Full-Length Split GFP Mutant D117C Disulfide Dimer, P 31 2 1 Space Group
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, fluorescent protein D117C
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-20
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6O
DownloadVisualize
BU of 4w6o by Molmil
Crystal Structure of Full-Length Split GFP Mutant D117C Disulfide Dimer, P 64 2 2 Space Group
Descriptor: fluorescent protein D117C
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-20
Release date:2015-02-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
4W6R
DownloadVisualize
BU of 4w6r by Molmil
Crystal Structure of Full-Length Split GFP Mutant D102C Disulfide Dimer, P 1 Space Group
Descriptor: fluorescent protein D102C
Authors:Leibly, D.J, Waldo, G.S, Yeates, T.O.
Deposit date:2014-08-20
Release date:2015-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.471 Å)
Cite:A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.
Structure, 23, 2015
6E17
DownloadVisualize
BU of 6e17 by Molmil
A131E mutant of cyt P460 of Nitrosomonas sp. AL212 with NO bound
Descriptor: Cytochrome P460, HEME C, NITRIC OXIDE
Authors:Smith, M, Lancaster, K.
Deposit date:2018-07-09
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460.
Chem Sci, 10, 2019
4WCZ
DownloadVisualize
BU of 4wcz by Molmil
Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
Descriptor: Enoyl-CoA hydratase/isomerase
Authors:Tkaczuk, K.L, Cooper, D.R, Chapman, H.C, Niedzialkowska, E, Cymborowski, M.T, Hillerich, B.S, Stead, M, Ahmed, M, Hammonds, J, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-09-05
Release date:2014-12-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of a putative enoyl-CoA hydratase/isomerase from Novosphingobium aromaticivorans
to be published
6E0X
DownloadVisualize
BU of 6e0x by Molmil
A131E mutant of cyt P460 of Nitrosomonas sp. AL212
Descriptor: Cytochrome P460, HEME C
Authors:Smith, M, Lancaster, K.
Deposit date:2018-07-07
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.974 Å)
Cite:Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460.
Chem Sci, 10, 2019
6ZXL
DownloadVisualize
BU of 6zxl by Molmil
Fully-loaded anthrax lethal toxin in its heptameric pre-pore state and PA7LF(2+1A) arrangement
Descriptor: Lethal factor, Protective antigen
Authors:Quentin, D, Antoni, C, Gatsogiannis, C, Raunser, S.
Deposit date:2020-07-29
Release date:2020-09-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of the fully-loaded asymmetric anthrax lethal toxin in its heptameric pre-pore state.
Plos Pathog., 16, 2020
4XXS
DownloadVisualize
BU of 4xxs by Molmil
Crystal structure of BACE1 with a pyrazole-substituted tetrahydropyran thioamidine
Descriptor: (4aR,6R,8aS)-8a-(2,4-difluorophenyl)-6-(1-methyl-1H-pyrazol-4-yl)-4,4a,5,6,8,8a-hexahydropyrano[3,4-d][1,3]thiazin-2-amine, Beta-secretase 1, DIMETHYL SULFOXIDE, ...
Authors:Parris, K.D, Pandit, J.
Deposit date:2015-01-30
Release date:2015-04-01
Last modified:2015-04-22
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Utilizing Structures of CYP2D6 and BACE1 Complexes To Reduce Risk of Drug-Drug Interactions with a Novel Series of Centrally Efficacious BACE1 Inhibitors.
J.Med.Chem., 58, 2015
4Y10
DownloadVisualize
BU of 4y10 by Molmil
Trypsin in complex with with BPTI mutant (2S)-2-amino-4,4-difluorobutanoic acid
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
Deposit date:2015-02-06
Release date:2015-06-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
5LY5
DownloadVisualize
BU of 5ly5 by Molmil
Arcadin-1 from Pyrobaculum calidifontis
Descriptor: arcadin-1
Authors:Izore, T, Lowe, J.
Deposit date:2016-09-23
Release date:2017-01-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crenactin forms actin-like double helical filaments regulated by arcadin-2.
Elife, 5, 2016
5M1R
DownloadVisualize
BU of 5m1r by Molmil
X-ray structure of human G166D PGK-1 mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoglycerate kinase 1
Authors:Ilari, A, Cipollone, A, Fiorillo, A, Petrosino, M.
Deposit date:2016-10-10
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The phosphoglycerate kinase 1 variants found in carcinoma cells display different catalytic activity and conformational stability compared to the native enzyme.
PLoS ONE, 13, 2018
6F4N
DownloadVisualize
BU of 6f4n by Molmil
Human JMJD5 in complex with MN and 2OG.
Descriptor: 2-OXOGLUTARIC ACID, JmjC domain-containing protein 5, MANGANESE (II) ION
Authors:Chowdhury, R, Islam, M.S, Schofield, C.J.
Deposit date:2017-11-29
Release date:2018-04-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.541 Å)
Cite:JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
4Y6T
DownloadVisualize
BU of 4y6t by Molmil
Structure of Tobacco streak virus coat protein dimer at 2.4 Angstroms resolution
Descriptor: 1,2-ETHANEDIOL, Coat protein
Authors:Gulati, A, Murthy, M.R.N.
Deposit date:2015-02-13
Release date:2016-01-20
Last modified:2016-02-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural studies on tobacco streak virus coat protein: Insights into the pleomorphic nature of ilarviruses
J.Struct.Biol., 193, 2016
5LS7
DownloadVisualize
BU of 5ls7 by Molmil
Complex of wild type E. coli alpha aspartate decarboxylase with its processing factor PanZ
Descriptor: ACETYL COENZYME *A, Aspartate 1-decarboxylase, CARBON DIOXIDE, ...
Authors:Monteiro, D.C.F, Webb, M.E, Pearson, A.R.
Deposit date:2016-08-22
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:The Mechanism of Regulation of Pantothenate Biosynthesis by the PanD-PanZAcCoA Complex Reveals an Additional Mode of Action for the Antimetabolite N-Pentyl Pantothenamide (N5-Pan).
Biochemistry, 56, 2017
5LMF
DownloadVisualize
BU of 5lmf by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM3 peptide (region 484-500)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ...
Authors:Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
Deposit date:2016-07-30
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6F4S
DownloadVisualize
BU of 6f4s by Molmil
Human JMJD5 (N308C) in complex with Mn(II), 2OG and RCCD1 (139-143) (complex-4)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-OXOGLUTARIC ACID, GLYCEROL, ...
Authors:Chowdhury, R, Islam, M.S, Schofield, C.J.
Deposit date:2017-11-30
Release date:2018-04-04
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.461 Å)
Cite:JMJD5 is a human arginyl C-3 hydroxylase.
Nat Commun, 9, 2018
4X47
DownloadVisualize
BU of 4x47 by Molmil
Crystal structure of the intramolecular trans-sialidase from Ruminococcus gnavus in complex with Neu5Ac2en
Descriptor: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, Anhydrosialidase, PHOSPHATE ION
Authors:Owen, C.D, Tailford, L.E, Taylor, G.L, Juge, N.
Deposit date:2014-12-02
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of intramolecular trans-sialidases in human gut microbiota suggests novel mechanisms of mucosal adaptation.
Nat Commun, 6, 2015
6HU7
DownloadVisualize
BU of 6hu7 by Molmil
phosphorylated F97L Hepatitis B core protein capsid
Descriptor: Capsid protein
Authors:Bottcher, B, Nassal, M.
Deposit date:2018-10-05
Release date:2018-12-26
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of Mutant Hepatitis B Core Protein Capsids with Premature Secretion Phenotype.
J. Mol. Biol., 430, 2018

226414

PDB entries from 2024-10-23

PDB statisticsPDBj update infoContact PDBjnumon