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1PLG
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EVIDENCE FOR THE EXTENDED HELICAL NATURE OF POLYSACCHARIDE EPITOPES. THE 2.8 ANGSTROMS RESOLUTION STRUCTURE AND THERMODYNAMICS OF LIGAND BINDING OF AN ANTIGEN BINDING FRAGMENT SPECIFIC FOR ALPHA-(2->8)-POLYSIALIC ACID
Descriptor: IGG2A=KAPPA=
Authors:Evans, S.V, Sigurskjold, B.W, Jennings, H.J, Brisson, J.-R, Tse, W.C, To, R, Altman, E, Frosch, M, Weisgerber, C, Kratzin, H, Klebert, S, Vaesen, M, Bitter-Suermann, D, Rose, D.R, Young, N.M, Bundle, D.R.
Deposit date:1995-04-24
Release date:1996-04-03
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Evidence for the extended helical nature of polysaccharide epitopes. The 2.8 A resolution structure and thermodynamics of ligand binding of an antigen binding fragment specific for alpha-(2-->8)-polysialic acid.
Biochemistry, 34, 1995
2DW1
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Crystal structure of VAP2 from Crotalus atrox venom (Form 2-2 crystal)
Descriptor: 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ...
Authors:Takeda, S, Igarashi, T, Araki, S.
Deposit date:2006-08-02
Release date:2007-07-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins
Febs Lett., 581, 2007
1EX6
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CRYSTAL STRUCTURE OF UNLIGANDED FORM OF GUANYLATE KINASE FROM YEAST
Descriptor: GUANYLATE KINASE
Authors:Blaszczyk, J, Ji, X.
Deposit date:2000-05-01
Release date:2001-03-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of unligated guanylate kinase from yeast reveals GMP-induced conformational changes.
J.Mol.Biol., 307, 2001
1EHJ
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A PROTON-NMR INVESTIGATION OF THE FULLY REDUCED CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS
Descriptor: CYTOCHROME C7, HEME C
Authors:Assfalg, M, Banci, L, Bertini, I, Bruschi, M, Giudici-Orticoni, M.T.
Deposit date:2000-02-21
Release date:2000-05-10
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:A proton-NMR investigation of the fully reduced cytochrome c7 from Desulfuromonas acetoxidans. Comparison between the reduced and the oxidized forms.
Eur.J.Biochem., 266, 1999
1F22
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A PROTON-NMR INVESTIGATION OF THE FULLY REDUCED CYTOCHROME C7 FROM DESULFUROMONAS ACETOXIDANS. COMPARISON BETWEEN THE REDUCED AND THE OXIDIZED FORMS.
Descriptor: CYTOCHROME C7, HEME C
Authors:Assfalg, M, Banci, L, Bertini, I, Bruschi, M, Giudici-Orticoni, M.T.
Deposit date:2000-05-23
Release date:2000-06-21
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:A proton-NMR investigation of the fully reduced cytochrome c7 from Desulfuromonas acetoxidans. Comparison between the reduced and the oxidized forms.
Eur.J.Biochem., 266, 1999
2Y8V
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BU of 2y8v by Molmil
Structure of chitinase, ChiC, from Aspergillus fumigatus.
Descriptor: CLASS III CHITINASE, PUTATIVE, SODIUM ION
Authors:Rush, C.L, Schuettelkopf, A.W, Gay, L.M, van Aalten, D.M.F.
Deposit date:2011-02-10
Release date:2012-02-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure of Chitinase, Chic, from Aspergillus Fumigatus.
To be Published
1WMN
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Crystal structure of topaquinone-containing amine oxidase activated by cobalt ion
Descriptor: COBALT (II) ION, Phenylethylamine oxidase
Authors:Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K.
Deposit date:2004-07-13
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase
Biochemistry, 44, 2005
2O6F
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Structure of metal- free rTp34 from Treponema pallidum
Descriptor: 1,2-ETHANEDIOL, 34 kDa membrane antigen, CHLORIDE ION, ...
Authors:Machius, M, Brautigam, C.A, Deka, R.K, Tomchick, D.R, Lumpkins, S.B, Norgard, M.V.
Deposit date:2006-12-07
Release date:2006-12-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of the Tp34 (TP0971) lipoprotein of treponema pallidum: implications of its metal-bound state and affinity for human lactoferrin.
J.Biol.Chem., 282, 2007
1WMO
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Crystal structure of topaquinone-containing amine oxidase activated by nickel ion
Descriptor: NICKEL (II) ION, Phenylethylamine oxidase
Authors:Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K.
Deposit date:2004-07-13
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase
Biochemistry, 44, 2005
1QQD
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CRYSTAL STRUCTURE OF HLA-CW4, A LIGAND FOR THE KIR2D NATURAL KILLER CELL INHIBITORY RECEPTOR
Descriptor: BETA-2 MICROGLOBULIN, HISTOCOMPATIBILITY LEUKOCYTE ANTIGEN (HLA)-CW4 (HEAVY CHAIN), HLA-CW4 SPECIFIC PEPTIDE
Authors:Fan, Q.R, Wiley, D.C.
Deposit date:1999-06-03
Release date:1999-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of human histocompatibility leukocyte antigen (HLA)-Cw4, a ligand for the KIR2D natural killer cell inhibitory receptor
J.Exp.Med., 190, 1999
2CCH
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BU of 2cch by Molmil
The crystal structure of CDK2 cyclin A in complex with a substrate peptide derived from CDC modified with a gamma-linked ATP analogue
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CELL DIVISION CONTROL PROTEIN 6 HOMOLOG, CELL DIVISION PROTEIN KINASE 2, ...
Authors:Cheng, K.Y, Noble, M.E.M, Skamnaki, V, Brown, N.R, Lowe, E.D, Kontogiannis, L, Shen, K, Cole, P.A, Siligardi, G, Johnson, L.N.
Deposit date:2006-01-16
Release date:2006-05-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Role of the Phospho-Cdk2/Cyclin a Recruitment Site in Substrate Recognition
J.Biol.Chem., 281, 2006
4P40
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BU of 4p40 by Molmil
Chlamydia pneumoniae CopN
Descriptor: CHLORIDE ION, CopN, DIMETHYLAMINE, ...
Authors:Nawrotek, A, Guimaraes, B.G, Knossow, M, Gigant, B.
Deposit date:2014-03-10
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Biochemical and Structural Insights into Microtubule Perturbation by CopN from Chlamydia pneumoniae.
J.Biol.Chem., 289, 2014
2XVN
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A. fumigatus chitinase A1 phenyl-methylguanylurea complex
Descriptor: 1-METHYL-3-(N-PHENYLCARBAMIMIDOYL)UREA, ASPERGILLUS FUMIGATUS CHITINASE A1, CHLORIDE ION
Authors:Rush, C.L, Schuttelkopf, A.W, Hurtado-Guerrero, R, Blair, D.E, Ibrahim, A.F.M, Desvergnes, S, Eggleston, I.M, van Aalten, D.M.F.
Deposit date:2010-10-26
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Natural Product-Guided Discovery of a Fungal Chitinase Inhibitor.
Chem.Biol., 17, 2010
2RNE
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Solution structure of the second RNA recognition motif (RRM) of TIA-1
Descriptor: Tia1 protein
Authors:Takahashi, M, Kuwasako, K, Abe, C, Tsuda, K, Inoue, M, Terada, T, Shirouzu, M, Kobayashi, N, Kigawa, T, Taguchi, S, Guntert, P, Hayashizaki, Y, Tanaka, A, Muto, Y, Yokoyama, S.
Deposit date:2007-12-19
Release date:2008-11-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode
Biochemistry, 47, 2008
2O6D
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Structure of native rTp34 from Treponema pallidum
Descriptor: 1,2-ETHANEDIOL, 34 kDa membrane antigen, CHLORIDE ION, ...
Authors:Machius, M, Brautigam, C.A, Deka, R.K, Tomchick, D.R, Lumpkins, S.B, Norgard, M.V.
Deposit date:2006-12-07
Release date:2006-12-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of the Tp34 (TP0971) lipoprotein of treponema pallidum: implications of its metal-bound state and affinity for human lactoferrin.
J.Biol.Chem., 282, 2007
2O7E
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Tyrosine ammonia-lyase from Rhodobacter sphaeroides (His89Phe variant), bound to 2-aminoindan-2-phosphonic acid
Descriptor: (2-AMINO-2,3-DIHYDRO-1H-INDEN-2-YL)PHOSPHONIC ACID, Putative histidine ammonia-lyase
Authors:Louie, G.V, Bowman, M.E, Moffitt, M.C, Baiga, T.J, Moore, B.S, Noel, J.P.
Deposit date:2006-12-11
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural determinants and modulation of substrate specificity in phenylalanine-tyrosine ammonia-lyases.
Chem.Biol., 13, 2006
1WMP
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BU of 1wmp by Molmil
Crystal structure of amine oxidase complexed with cobalt ion
Descriptor: COBALT (II) ION, Phenylethylamine oxidase
Authors:Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K.
Deposit date:2004-07-13
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase
Biochemistry, 44, 2005
4JCK
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BU of 4jck by Molmil
Galectin-3 carbohydrate recognition domain in complex with thioditaloside
Descriptor: CHLORIDE ION, Galectin-3, beta-D-talopyranose-(1-1)-1-thio-beta-D-talopyranose
Authors:Bum-Erdene, K, Blanchard, H.
Deposit date:2013-02-22
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Investigation into the feasibility of thioditaloside as a novel scaffold for galectin-3-specific inhibitors.
Chembiochem, 14, 2013
1C2U
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SOLUTION STRUCTURE OF [ABU3,35]SHK12-28,17-32
Descriptor: SYNTHETIC PEPTIDE ANALOGUE OF SHK TOXIN
Authors:Pennington, M.W, Lanigan, M.D, Kalman, K, Manhir, V.M, Rauer, H, McVaugh, C.T, Behm, D, Donaldson, D, Chandy, K.G, Kem, W.R, Norton, R.S.
Deposit date:1999-07-27
Release date:1999-11-10
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Role of disulfide bonds in the structure and potassium channel blocking activity of ShK toxin.
Biochemistry, 38, 1999
2XKI
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Aquo-met structure of C.lacteus mini-Hb
Descriptor: GLYCEROL, NEURAL HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pesce, A, Nardini, M, Dewilde, S, Capece, L, Marti, M.A, Congia, S, Salter, M.D, Blouin, G.C, Estrin, D.A, Ascenzi, P, Moens, L, Bolognesi, M, Olson, J.S.
Deposit date:2010-07-08
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin.
J.Biol.Chem., 286, 2011
2XKG
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C.lacteus mini-Hb Leu86Ala mutant
Descriptor: NEURAL HEMOGLOBIN, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Pesce, A, Nardini, M, Dewilde, S, Capece, L, Marti, M.A, Congia, S, Salter, M.D, Blouin, G.C, Estrin, D.A, Ascenzi, P, Moens, L, Bolognesi, M, Olson, J.S.
Deposit date:2010-07-08
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Ligand Migration in the Apolar Tunnel of Cerebratulus Lacteus Mini-Hemoglobin.
J.Biol.Chem., 286, 2011
2RPC
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Solution structure of the tandem zf-C2H2 domains from the human zinc finger protein ZIC 3
Descriptor: ZINC ION, Zinc finger protein ZIC 3
Authors:Tomizawa, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-05-14
Release date:2009-03-31
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Functional and structural basis of the nuclear localization signal in the ZIC3 zinc finger domain
Hum.Mol.Genet., 17, 2008
1FJD
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HUMAN PARVULIN-LIKE PEPTIDYL PROLYL CIS/TRANS ISOMERASE, HPAR14
Descriptor: PEPTIDYL PROLYL CIS/TRANS ISOMERASE (PPIASE)
Authors:Terada, T, Shirouzu, M, Fukumori, Y, Fujimori, F, Ito, Y, Kigawa, T, Yokoyama, S, Uchida, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-08-08
Release date:2001-08-08
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14.
J.Mol.Biol., 305, 2001
2O6C
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Structure of selenomethionyl rTp34 from Treponema pallidum
Descriptor: 1,2-ETHANEDIOL, 34 kDa membrane antigen, CHLORIDE ION, ...
Authors:Machius, M, Brautigam, C.A, Deka, R.K, Tomchick, D.R, Lumpkins, S.B, Norgard, M.V.
Deposit date:2006-12-07
Release date:2006-12-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the Tp34 (TP0971) lipoprotein of treponema pallidum: implications of its metal-bound state and affinity for human lactoferrin.
J.Biol.Chem., 282, 2007
2O6Y
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Tyrosine ammonia-lyase from Rhodobacter sphaeroides
Descriptor: Putative histidine ammonia-lyase
Authors:Louie, G.V, Bowman, M.E, Moffitt, M.C, Baiga, T.J, Moore, B.S, Noel, J.P.
Deposit date:2006-12-09
Release date:2007-01-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural determinants and modulation of substrate specificity in phenylalanine-tyrosine ammonia-lyases.
Chem.Biol., 13, 2006

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