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8VQ9
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BU of 8vq9 by Molmil
Prefusion stabilized structure of the SARS-CoV-2 fusion machinery
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2
Authors:Lee, J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2024-01-18
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A broadly generalizable stabilization strategy for sarbecovirus fusion machinery vaccines.
Nat Commun, 15, 2024
8VQ4
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BU of 8vq4 by Molmil
CDK2-CyclinE1 in complex with allosteric inhibitor I-125A.
Descriptor: (8R)-6-(1-benzyl-1H-pyrazole-4-carbonyl)-N-[(2S,3R)-3-(2-cyclohexylethoxy)-1-(methylamino)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
Authors:Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
Deposit date:2024-01-17
Release date:2024-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An allosteric cyclin E-CDK2 site mapped by paralog hopping with covalent probes.
Nat.Chem.Biol., 2024
8VQ3
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BU of 8vq3 by Molmil
CDK2-CyclinE1 in complex with allosteric inhibitor I-198.
Descriptor: (8R)-N-[(2S,3R)-3-(cyclohexylmethoxy)-1-(morpholin-4-yl)-1-oxobutan-2-yl]-2-[(1S)-2,2-dimethylcyclopropane-1-carbonyl]-6-(1,3-thiazole-5-carbonyl)-2,6-diazaspiro[3.4]octane-8-carboxamide, Cyclin-dependent kinase 2, G1/S-specific cyclin-E1
Authors:Hirschi, M, Johnson, E, Zhang, Y, Liu, Z, Brodsky, O, Won, S.J, Nagata, A, Petroski, M.D, Majmudar, J.D, Niessen, S, VanArsdale, T, Gilbert, A.M, Hayward, M.M, Stewart, A.E, Nager, A.R, Melillo, B, Cravatt, B.
Deposit date:2024-01-17
Release date:2024-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:An allosteric cyclin E-CDK2 site mapped by paralog hopping with covalent probes.
Nat.Chem.Biol., 2024
8VQ2
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BU of 8vq2 by Molmil
HSV1 polymerase ternary complex with dsDNA and compound 44
Descriptor: 2-(4-bromophenyl)-N-(3-methoxy-4-{[(4S)-2-oxo-1,3-oxazolidin-4-yl]methyl}phenyl)acetamide, DNA (5'-D(P*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*TP*AP*C)-3'), DNA (5'-D(P*TP*GP*GP*TP*AP*GP*GP*GP*GP*AP*AP*GP*GP*AP*T)-3'), ...
Authors:Hayes, R.P, Heo, M.R, Plotkin, M.
Deposit date:2024-01-17
Release date:2024-08-28
Method:X-RAY DIFFRACTION (3.829 Å)
Cite:Discovery of Broad-Spectrum Herpes Antiviral Oxazolidinone Amide Derivatives and Their Structure-Activity Relationships.
Acs Med.Chem.Lett., 15, 2024
8VQ1
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BU of 8vq1 by Molmil
Pseudomonas fluorescens G150T isocyanide hydratase at 298 K XFEL data, thioimidate intermediate
Descriptor: CHLORIDE ION, Isonitrile hydratase InhA, N-(4-nitrophenyl)methanimine
Authors:Wilson, M.A, Smith, N, Dasgupta, M, Dolamore, C.
Deposit date:2024-01-17
Release date:2024-02-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Changes in an enzyme ensemble during catalysis observed by high-resolution XFEL crystallography.
Sci Adv, 10, 2024
8VQ0
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UIC-13-MER extension of UIC-1
Descriptor: METHANOL, UIC-13-MER
Authors:Ganatra, P.
Deposit date:2024-01-17
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPZ
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BU of 8vpz by Molmil
UIC-1-BPE1MER mutation of UIC-1-cap
Descriptor: METHANOL, UIC-1-BPE1MER
Authors:Ganatra, P.
Deposit date:2024-01-17
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPY
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BU of 8vpy by Molmil
UIC-16-MER extension of UIC-1
Descriptor: METHANOL, UIC-16-MER
Authors:Ganatra, P.
Deposit date:2024-01-17
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPX
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BU of 8vpx by Molmil
UIC-10-BPE extension of UIC-1
Descriptor: UIC-10-BPE
Authors:Ganatra, P.
Deposit date:2024-01-17
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPW
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BU of 8vpw by Molmil
Pseudomonas fluorescens G150T isocyanide hydratase at 298 K XFEL data, free enzyme
Descriptor: CHLORIDE ION, Isonitrile hydratase InhA
Authors:Wilson, M.A, Smith, N, Dasgupta, M, Dolamore, C.
Deposit date:2024-01-17
Release date:2024-02-21
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Changes in an enzyme ensemble during catalysis observed by high-resolution XFEL crystallography.
Sci Adv, 10, 2024
8VPV
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BU of 8vpv by Molmil
Class III PreQ1 riboswitch mutant delta84
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, RNA (101-MER)
Authors:Srivastava, Y, Jenkins, J.L, Wedekind, J.E.
Deposit date:2024-01-17
Release date:2024-10-02
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:New insights into Class III PreQ1 metabolite binding
To Be Published
8VPU
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BU of 8vpu by Molmil
Crystal structure of mouse Importin alpha in complex with dengue virus 3 NS5 central NLS peptide
Descriptor: Importin subunit alpha-1, RNA-directed RNA polymerase NS5 central NLS peptide
Authors:Roman, N, Swarbrick, C.M.D, Forwood, J.K.
Deposit date:2024-01-17
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Serotype-Specific Regulation of Dengue Virus NS5 Protein Subcellular Localization.
Acs Infect Dis., 10, 2024
8VPT
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BU of 8vpt by Molmil
UIC-14-BPE extension of UIC-1
Descriptor: ACETONITRILE, UIC-14-BPE
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPS
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BU of 8vps by Molmil
UIC-12-BPE extension of UIC-1
Descriptor: DIMETHYLFORMAMIDE, UIC-12-BPE
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPR
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BU of 8vpr by Molmil
Crystal structure of mouse Importin alpha in complex with Dengue 1 NS5 central NLS peptide
Descriptor: Importin subunit alpha-1, RNA-directed RNA polymerase NS5 central NLS peptide
Authors:Cheng, C.X, Swarbrick, C.M.D, Forward, J.K.
Deposit date:2024-01-16
Release date:2024-08-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Serotype-Specific Regulation of Dengue Virus NS5 Protein Subcellular Localization.
Acs Infect Dis., 10, 2024
8VPP
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BU of 8vpp by Molmil
Phosphorylated human NCC in complex with chlorthalidone
Descriptor: 2-chloro-5-[(1S)-1-hydroxy-3-oxo-2H-isoindol-1-yl]benzenesulfonamide, Solute carrier family 12 member 3
Authors:Zhao, Y.X, Cao, E.H.
Deposit date:2024-01-16
Release date:2024-09-04
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural bases for Na + -Cl - cotransporter inhibition by thiazide diuretic drugs and activation by kinases.
Nat Commun, 15, 2024
8VPO
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BU of 8vpo by Molmil
X-Ray Crystal Structure of TigE from Paramaledivibacter caminithermalis
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Radical SAM core domain-containing protein
Authors:Grove, T.L, Lachowicz, J.C, Zizola, C.
Deposit date:2024-01-16
Release date:2024-02-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural, Biochemical, and Bioinformatic Basis for Identifying Radical SAM Cyclopropyl Synthases.
Acs Chem.Biol., 19, 2024
8VPN
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BU of 8vpn by Molmil
Phosphorylated human NCC in complex with indapamide
Descriptor: 4-chloro-N-[(2S)-2-methyl-2,3-dihydro-1H-indol-1-yl]-3-sulfamoylbenzamide, ADENOSINE-5'-TRIPHOSPHATE, Solute carrier family 12 member 3
Authors:Zhao, Y.X, Cao, E.H.
Deposit date:2024-01-16
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural bases for Na + -Cl - cotransporter inhibition by thiazide diuretic drugs and activation by kinases.
Nat Commun, 15, 2024
8VPJ
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BU of 8vpj by Molmil
UIC-11-BPE extension of UIC-1
Descriptor: ACETONITRILE, UIC-11-BPE
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPI
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BU of 8vpi by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 462
Descriptor: DNA Strand I, DNA Strand II, N-{3-[(2-amino-6-methylpyrimidin-4-yl)amino]-5-[(4-methylpiperazin-1-yl)methyl]phenyl}-3-[(quinolin-4-yl)amino]benzamide, ...
Authors:Zhou, J, Horton, J.R, Cheng, X.
Deposit date:2024-01-16
Release date:2024-09-25
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Quinoline-based compounds can inhibit diverse enzymes that act on DNA.
Biorxiv, 2024
8VPH
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BU of 8vph by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 455 and Inhibitor MC4741
Descriptor: DNA Strand I, DNA Strand II, N-(3-phenylpropyl)adenosine, ...
Authors:Zhou, J, Horton, J.R, Cheng, X.
Deposit date:2024-01-16
Release date:2024-09-25
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Quinoline-based compounds can inhibit diverse enzymes that act on DNA.
Biorxiv, 2024
8VPG
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BU of 8vpg by Molmil
CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Containing Quinoline-based SGI-1027 Analog 455
Descriptor: DNA Strand I, DNA Strand II, N-{3-[(2-amino-6-methylpyrimidin-4-yl)amino]-5-[(dimethylamino)methyl]phenyl}-3-[(quinolin-4-yl)amino]benzamide, ...
Authors:Zhou, J, Horton, J.R, Cheng, X.
Deposit date:2024-01-16
Release date:2024-09-25
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Quinoline-based compounds can inhibit diverse enzymes that act on DNA.
Biorxiv, 2024
8VPE
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BU of 8vpe by Molmil
UIC-10-BIF extension of UIC-1
Descriptor: ACETONITRILE, UIC-10-BIF
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPD
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BU of 8vpd by Molmil
UIC-11-BIF extension of UIC-1
Descriptor: ACETONITRILE, UIC-11-BIF
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024
8VPC
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BU of 8vpc by Molmil
UIC-13-BIF extension of UIC-1
Descriptor: UIC-13-BIF
Authors:Ganatra, P.
Deposit date:2024-01-16
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Diverse Proteomimetic Frameworks via Rational Design of pi-Stacking Peptide Tectons.
J.Am.Chem.Soc., 146, 2024

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PDB entries from 2024-10-30

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