Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KGT
DownloadVisualize
BU of 4kgt by Molmil
Backbone Modifications in the Protein GB1 Turns: Aib10, D-Pro47
Descriptor: Streptococcal Protein GB1 Backbone Modified Variant: Aib10, D-Pro47
Authors:Reinert, Z.E, Lengyel, G.A, Horne, W.S.
Deposit date:2013-04-29
Release date:2013-09-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein-like Tertiary Folding Behavior from Heterogeneous Backbones.
J.Am.Chem.Soc., 135, 2013
2O6N
DownloadVisualize
BU of 2o6n by Molmil
RH4B: designed right-handed coiled coil tetramer with all biological amino acids
Descriptor: RH4B designed peptide, YTTERBIUM (II) ION
Authors:Sales, M, Alber, T.
Deposit date:2006-12-07
Release date:2007-10-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structure of a designed, right-handed coiled-coil tetramer containing all biological amino acids.
Protein Sci., 16, 2007
3DL0
DownloadVisualize
BU of 3dl0 by Molmil
Crystal structure of adenylate kinase variant AKlse3
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Bannen, R.M, Bianchetti, C.M, Bingman, C.A, McCoy, J.G.
Deposit date:2008-06-26
Release date:2009-06-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Effectiveness and limitations of local structural entropy optimization in the thermal stabilization of mesophilic and thermophilic adenylate kinases.
Proteins, 82, 2014
4M6A
DownloadVisualize
BU of 4m6a by Molmil
N-Terminal beta-Strand Swapping in a Consensus Derived Alternative Scaffold Driven by Stabilizing Hydrophobic Interactions
Descriptor: Tencon
Authors:Luo, J, Teplyakov, A, Obmolova, G, Malia, T.J, Chan, W, Jocobs, S.A, O'neil, K.T, Gilliland, G.L.
Deposit date:2013-08-09
Release date:2014-02-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:N-terminal beta-strand swapping in a consensus-derived alternative scaffold driven by stabilizing hydrophobic interactions.
Proteins, 82, 2014
4J8Y
DownloadVisualize
BU of 4j8y by Molmil
E3_5 DARPin D77S mutant
Descriptor: DARPin_E3_5_D77S
Authors:Seeger, M.A, Gruetter, M.G.
Deposit date:2013-02-15
Release date:2013-08-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design, construction, and characterization of a second-generation DARPin library with reduced hydrophobicity.
Protein Sci., 22, 2013
5CY5
DownloadVisualize
BU of 5cy5 by Molmil
Crystal structure of the T33-51H designed self-assembling protein tetrahedron
Descriptor: T33-51H-A, T33-51H-B
Authors:Cannon, K.A, Cascio, D, Park, R, Boyken, S, King, N, Yeates, T.O.
Deposit date:2015-07-30
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Design and structure of two new protein cages illustrate successes and ongoing challenges in protein engineering.
Protein Sci., 29, 2020
4LPT
DownloadVisualize
BU of 4lpt by Molmil
Crystal structure of monomeric TENCON variant P54CR4-31
Descriptor: TENCON variant P54CR4-31
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L.
Deposit date:2013-07-16
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.544 Å)
Cite:C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold.
Proteins, 82, 2014
3DKV
DownloadVisualize
BU of 3dkv by Molmil
Crystal structure of adenylate kinase variant AKlse1
Descriptor: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ...
Authors:Bannen, R.M, Bianchetti, C.M, Bingman, C.A, Bitto, E.B.
Deposit date:2008-06-26
Release date:2009-06-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of adenylate kinase variant AKlse1.
To be Published
5A0O
DownloadVisualize
BU of 5a0o by Molmil
adhiron raised against p300
Descriptor: ADHIRON
Authors:Kyle, H.F, Wickson, K.F, Stott, J, Burslem, G.M, Breeze, A.L, Tiede, C, Tomlinson, D.C, Warriner, S.L, Nelson, A, Wilson, A.J, Edwards, T.A.
Deposit date:2015-04-21
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Exploration of the Hif-1Alpha.P300 Interface Using Peptide and Adhiron Phage Display Technologies
Mol.Biosyst., 11, 2015
4LPX
DownloadVisualize
BU of 4lpx by Molmil
Crystal structure of TENCON variant D4
Descriptor: TENCON variant D4
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L.
Deposit date:2013-07-16
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C-terminal beta-strand swapping in a consensus-derived fibronectin Type III scaffold.
Proteins, 82, 2014
5AEI
DownloadVisualize
BU of 5aei by Molmil
Designed Armadillo repeat protein YIIIM5AII in complex with peptide (KR)5
Descriptor: ACETATE ION, CALCIUM ION, DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII, ...
Authors:Hansen, S, Tremmel, D, Madhurantakam, C, Reichen, C, Mittl, P, Plueckthun, A.
Deposit date:2015-08-31
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure and Energetic Contributions of a Designed Modular Peptide-Binding Protein with Picomolar Affinity.
J.Am.Chem.Soc., 138, 2016
4LT9
DownloadVisualize
BU of 4lt9 by Molmil
Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR404
Descriptor: Engineered Protein OR404
Authors:Vorobiev, S, Su, M, Bjelic, S, Kipnis, Y, Wang, L, Sahdev, S, Xiao, R, Kogan, S, Maglaqui, M, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-07-23
Release date:2013-08-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of Engineered Protein OR404.
To be Published
3CSG
DownloadVisualize
BU of 3csg by Molmil
Crystal Structure of Monobody YS1(MBP-74)/Maltose Binding Protein Fusion Complex
Descriptor: Maltose-binding protein Monobody YS1 Fusion
Authors:Gilbreth, R.N, Koide, S.
Deposit date:2008-04-09
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
J.Mol.Biol., 381, 2008
3CSU
DownloadVisualize
BU of 3csu by Molmil
CATALYTIC TRIMER OF ESCHERICHIA COLI ASPARTATE TRANSCARBAMOYLASE
Descriptor: CALCIUM ION, PROTEIN (ASPARTATE CARBAMOYLTRANSFERASE)
Authors:Beernink, P.T, Endrizzi, J.A, Alber, T, Schachman, H.K.
Deposit date:1999-04-22
Release date:1999-05-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Assessment of the allosteric mechanism of aspartate transcarbamoylase based on the crystalline structure of the unregulated catalytic subunit.
Proc.Natl.Acad.Sci.USA, 96, 1999
4DB6
DownloadVisualize
BU of 4db6 by Molmil
Designed Armadillo repeat protein (YIIIM3AII)
Descriptor: Armadillo repeat protein
Authors:Madhurantakam, C, Varadamsetty, G, Grutter, M.G, Pluckthun, A, Mittl, P.R.E.
Deposit date:2012-01-13
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based optimization of designed Armadillo-repeat proteins.
Protein Sci., 21, 2012
4DBA
DownloadVisualize
BU of 4dba by Molmil
Designed Armadillo repeat protein (YIIM3AII)
Descriptor: Designed Armadillo repeat protein, YIIM3AII, GLYCEROL
Authors:Madhurantakam, C, Varadamsetty, G, Grutter, M.G, Pluckthun, A, Mittl, P.R.E.
Deposit date:2012-01-13
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based optimization of designed Armadillo-repeat proteins.
Protein Sci., 21, 2012
4DB8
DownloadVisualize
BU of 4db8 by Molmil
Designed Armadillo-repeat Protein
Descriptor: Armadillo-repeat Protein, MAGNESIUM ION
Authors:Madhurantakam, C, Varadamsetty, G, Grutter, M.G, Pluckthun, A, Mittl, P.R.E.
Deposit date:2012-01-13
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based optimization of designed Armadillo-repeat proteins.
Protein Sci., 21, 2012
2P05
DownloadVisualize
BU of 2p05 by Molmil
Structural Insights into the Evolution of a Non-Biological Protein
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, PENTAETHYLENE GLYCOL, ...
Authors:Smith, M, Rosenow, M, Wang, M, Allen, J.P, Szostak, J.W, Chaput, J.C.
Deposit date:2007-02-28
Release date:2007-06-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the evolution of a non-biological protein: importance of surface residues in protein fold optimization.
PLoS ONE, 2, 2007
3E79
DownloadVisualize
BU of 3e79 by Molmil
Structure determination of the cancer-associated Mycoplasma hyorhinis protein Mh-p37
Descriptor: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Sippel, K.H, Robbins, A.H, Reutzel, R, Domsic, J, McKenna, R.
Deposit date:2008-08-18
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure determination of the cancer-associated Mycoplasma hyorhinis protein Mh-p37.
Acta Crystallogr.,Sect.D, 64, 2008
2V40
DownloadVisualize
BU of 2v40 by Molmil
Human Adenylosuccinate synthetase isozyme 2 in complex with GDP
Descriptor: ADENYLOSUCCINATE SYNTHETASE ISOZYME 2, GUANOSINE-5'-DIPHOSPHATE
Authors:Welin, M, Moche, M, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Tresaugues, L, van den Berg, S, Weigelt, J, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-06-27
Release date:2007-07-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human Adenylosuccinate Synthetase Isozyme 2 in Complex with Gdp
To be Published
2V30
DownloadVisualize
BU of 2v30 by Molmil
Human orotidine 5'-phosphate decarboxylase domain of uridine monophospate synthetase (UMPS) in complex with its product UMP.
Descriptor: OROTIDINE 5'-PHOSPHATE DECARBOXYLASE, URIDINE-5'-MONOPHOSPHATE
Authors:Moche, M, Ogg, D, Arrowsmith, C, Berglund, H, Busam, R, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, van den Berg, S, Weigelt, J, Welin, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2007-06-10
Release date:2007-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Human Orotidine 5'-Decarboxylase Domain of Human Uridine Monophosphate Synthetase (Umps)
To be Published
1P4R
DownloadVisualize
BU of 1p4r by Molmil
Crystal Structure of Human ATIC in complex with folate-based inhibitor BW1540U88UD
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, Bifunctional purine biosynthesis protein PURH, N-[(S)-(4-{[(2-AMINO-4-HYDROXYQUINAZOLIN-6-YL)(DIHYDROXY)-LAMBDA~4~-SULFANYL]AMINO}PHENYL)(HYDROXY)METHYL]-L-GLUTAMIC ACID, ...
Authors:Cheong, C.-G, Greasley, S.E, Horton, P.A, Beardsley, G.P, Wilson, I.A.
Deposit date:2003-04-23
Release date:2004-03-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures of human bifunctional enzyme aminoimidazole-4-carboxamide ribonucleotide transformylase/IMP cyclohydrolase in complex with potent sulfonyl-containing antifolates
J.Biol.Chem., 279, 2004
3KD7
DownloadVisualize
BU of 3kd7 by Molmil
Designed TPR module (CTPR390) in complex with its peptide-ligand (Hsp90 peptide)
Descriptor: CTPR390, Hsp90 MEEVD peptide
Authors:Cortajarena, A.L, Wang, J, Regan, L.
Deposit date:2009-10-22
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a designed tetratricopeptide repeat module in complex with its peptide ligand.
Febs J., 277, 2010
3F2E
DownloadVisualize
BU of 3f2e by Molmil
Crystal structure of Yellowstone SIRV coat protein C-terminus
Descriptor: CITRIC ACID, SIRV coat protein
Authors:Taurog, R.E, Szymczyna, B.R, Williamson, J.R, Johnson, J.E.
Deposit date:2008-10-29
Release date:2009-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Synergy of NMR, computation, and X-ray crystallography for structural biology.
Structure, 17, 2009
3LI1
DownloadVisualize
BU of 3li1 by Molmil
Crystal structure of the mutant I218A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-01-23
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: "remote" residues that stabilize the active conformation.
Biochemistry, 49, 2010

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon