1DRN
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![BU of 1drn by Molmil](/molmil-images/mine/1drn) | NMR SOLUTION STRUCTURE OF THE DNA DUPLEX CONTAINING DNA/RNA HYBRID REGION, D(GGAGA)R(UGAC)/D(GTCATCTCC) | Descriptor: | DNA (5'-D(*GP*TP*CP*AP*TP*CP*TP*CP*C)-3'), DNA/RNA (5'-D(*GP*GP*AP*GP*A)-R(P*UP*GP*AP*C)-3') | Authors: | Nishizaki, T, Iwai, S, Ohkubo, T, Kojima, C, Nakamura, H, Kyogoku, Y, Ohtsuka, E. | Deposit date: | 1995-11-15 | Release date: | 1996-04-03 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC). Biochemistry, 35, 1996
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1DHH
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![BU of 1dhh by Molmil](/molmil-images/mine/1dhh) | NMR SOLUTION STRUCTURE OF THE DNA DUPLEX CONTAINING DNA/RNA HYBRID REGION, D(GG)R(AGAU)D(GAC)/D(GTCATCTCC) | Descriptor: | DNA (5'-D(*GP*TP*CP*AP*TP*CP*TP*CP*C)-3'), DNA/RNA (5'-D(*GP*G)-R(P*AP*GP*AP*U)-D(P*GP*AP*C)-3') | Authors: | Nishizaki, T, Iwai, S, Ohkubo, T, Kojima, C, Nakamura, H, Kyogoku, Y, Ohtsuka, E. | Deposit date: | 1995-10-18 | Release date: | 1996-04-03 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC). Biochemistry, 35, 1996
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1BPB
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![BU of 1bpb by Molmil](/molmil-images/mine/1bpb) | CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM | Descriptor: | DNA POLYMERASE BETA | Authors: | Sawaya, M.R, Pelletier, H, Kumar, A, Wilson, S.H, Kraut, J. | Deposit date: | 1994-04-12 | Release date: | 1994-06-22 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism. Science, 264, 1994
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2MMS
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![BU of 2mms by Molmil](/molmil-images/mine/2mms) | AG(7-deaza)G FAPY modified duplex | Descriptor: | DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*(7GU)P*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*CP*CP*TP*TP*AP*G)-3') | Authors: | Li, L, Stone, M. | Deposit date: | 2014-03-17 | Release date: | 2015-02-25 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct. Chem.Res.Toxicol., 28, 2015
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2MMQ
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![BU of 2mmq by Molmil](/molmil-images/mine/2mmq) | Solution structure of AGT FAPY Modified duplex | Descriptor: | DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3') | Authors: | Li, L, Stone, M. | Deposit date: | 2014-03-17 | Release date: | 2015-02-25 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct. Chem.Res.Toxicol., 28, 2015
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1D1U
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![BU of 1d1u by Molmil](/molmil-images/mine/1d1u) | USE OF AN N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE TO FACILITATE CRYSTALLIZATION AND ANALYSIS OF A PSEUDO-16-MER DNA MOLECULE CONTAINING G-A MISPAIRS | Descriptor: | DNA (5'-D(*AP*CP*GP*GP*CP*AP*CP*GP*AP*G)-3'), DNA (5'-D(*CP*TP*CP*GP*TP*G)-3'), PROTEIN (REVERSE TRANSCRIPTASE) | Authors: | Cote, M.L, Yohannan, S, Georgiadis, M.M. | Deposit date: | 1999-09-21 | Release date: | 2000-04-02 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Use of an N-terminal fragment from moloney murine leukemia virus reverse transcriptase to facilitate crystallization and analysis of a pseudo-16-mer DNA molecule containing G-A mispairs. Acta Crystallogr.,Sect.D, 56, 2000
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2I5O
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1ZD7
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![BU of 1zd7 by Molmil](/molmil-images/mine/1zd7) | 1.7 Angstrom Crystal Structure Of Post-Splicing Form of a dnaE Intein from Synechocystis Sp. Pcc 6803 | Descriptor: | DNA polymerase III alpha subunit, SULFATE ION | Authors: | Sun, P, Ye, S, Ferrandon, S, Evans, T.C, Xu, M.Q, Rao, Z. | Deposit date: | 2005-04-14 | Release date: | 2006-01-24 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structures of an intein from the split dnaE gene of Synechocystis sp. PCC6803 reveal the catalytic model without the penultimate histidine and the mechanism of zinc ion inhibition of protein splicing J.Mol.Biol., 353, 2005
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1CBV
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![BU of 1cbv by Molmil](/molmil-images/mine/1cbv) | AN AUTOANTIBODY TO SINGLE-STRANDED DNA: COMPARISON OF THE THREE-DIMENSIONAL STRUCTURES OF THE UNLIGANDED FAB AND A DEOXYNUCLEOTIDE-FAB COMPLEX | Descriptor: | DNA (5'-D(*TP*TP*T)-3'), PROTEIN (FAB (BV04-01) AUTOANTIBODY-HEAVY CHAIN), PROTEIN (FAB (BV04-01) AUTOANTIBODY-LIGHT CHAIN) | Authors: | Herron, J.N, He, X.M, Ballard, D.W, Blier, P.R, Pace, P.E, Bothwell, A.L.M, Voss Junior, E.W, Edmundson, A.B. | Deposit date: | 1993-03-16 | Release date: | 1994-01-31 | Last modified: | 2017-11-29 | Method: | X-RAY DIFFRACTION (2.66 Å) | Cite: | An autoantibody to single-stranded DNA: comparison of the three-dimensional structures of the unliganded Fab and a deoxynucleotide-Fab complex. Proteins, 11, 1991
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2MRO
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![BU of 2mro by Molmil](/molmil-images/mine/2mro) | |
4FP6
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![BU of 4fp6 by Molmil](/molmil-images/mine/4fp6) | |
2MJX
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![BU of 2mjx by Molmil](/molmil-images/mine/2mjx) | Solution NMR structure of a mismatch DNA | Descriptor: | DNA (5'-D(*CP*GP*CP*GP*TP*AP*CP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*CP*G)-3') | Authors: | Ghosh, A, Kumar, K.R, Bhunia, A, Chatterjee, S. | Deposit date: | 2014-01-21 | Release date: | 2014-03-05 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Double GC:GC mismatch in dsDNA enhances local dynamics retaining the DNA footprint: a high-resolution NMR study Chemmedchem, 9, 2014
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2MRP
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![BU of 2mrp by Molmil](/molmil-images/mine/2mrp) | |
1BDN
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![BU of 1bdn by Molmil](/molmil-images/mine/1bdn) | |
1D3X
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![BU of 1d3x by Molmil](/molmil-images/mine/1d3x) | INTRAMOLECULAR DNA TRIPLEX, NMR, 10 STRUCTURES | Descriptor: | DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*CP*TP*T)-3'), DNA (5'-D(*TP*TP*CP*TP*CP*TP*CP*T)-3') | Authors: | Tarkoy, M, Phipps, A.K, Schultze, P, Feigon, J. | Deposit date: | 1998-02-05 | Release date: | 1998-05-06 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of an intramolecular DNA triplex linked by hexakis(ethylene glycol) units: d(AGAGAGAA-(EG)6-TTCTCTCT-(EG)6-TCTCTCTT). Biochemistry, 37, 1998
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1EW1
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![BU of 1ew1 by Molmil](/molmil-images/mine/1ew1) | |
3NAO
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![BU of 3nao by Molmil](/molmil-images/mine/3nao) | A DNA Crystal Designed to Contain Two Molecules per Asymmetric Unit Cell | Descriptor: | DNA (5'-D(*AP*GP*CP*CP*TP*AP*CP*CP*TP*GP*CP*GP*TP*GP*GP*AP*CP*AP*GP*AP*C)-3'), DNA (5'-D(*CP*TP*TP*GP*AP*TP*GP*T)-3'), DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), ... | Authors: | Wang, T, Sha, R, Birktoft, J.J, Zheng, J, Mao, M, Seeman, N.C. | Deposit date: | 2010-06-02 | Release date: | 2011-11-30 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (5.03 Å) | Cite: | A DNA crystal designed to contain two molecules per asymmetric unit. J.Am.Chem.Soc., 132, 2010
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1EKW
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![BU of 1ekw by Molmil](/molmil-images/mine/1ekw) | NMR STRUCTURE OF A DNA THREE-WAY JUNCTION | Descriptor: | DNA (5'-D(*CP*GP*GP*TP*GP*CP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*CP*CP*AP*CP*CP*G)-3'), DNA (5'-D(*GP*GP*AP*CP*GP*TP*CP*GP*CP*AP*GP*C)-3') | Authors: | Thiviyanathan, V, Luxon, B.A, Leontis, N.B, Donne, D, Gorenstein, D.G. | Deposit date: | 2000-03-09 | Release date: | 2000-03-20 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Hybrid-hybrid matrix structural refinement of a DNA three-way junction from 3D NOESY-NOESY. J.Biomol.NMR, 14, 1999
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2MR9
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![BU of 2mr9 by Molmil](/molmil-images/mine/2mr9) | |
8A4I
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![BU of 8a4i by Molmil](/molmil-images/mine/8a4i) | Crystal structure of SALL4 zinc finger cluster 4 with AT-rich DNA | Descriptor: | DNA (5'-D(*GP*AP*TP*AP*TP*TP*AP*AP*TP*AP*TP*C)-3'), MAGNESIUM ION, Sal-like protein 4, ... | Authors: | Watson, J.A, Pantier, R, Jayachandran, U, Chhatbar, K, Alexander-Howden, B, Kruusvee, V, Prendecki, M, Bird, A, Cook, A.G. | Deposit date: | 2022-06-11 | Release date: | 2023-01-11 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.76 Å) | Cite: | Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome. Life Sci Alliance, 6, 2023
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1BUT
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![BU of 1but by Molmil](/molmil-images/mine/1but) | |
5UA3
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![BU of 5ua3 by Molmil](/molmil-images/mine/5ua3) | Crystal Structure of a DNA G-Quadruplex with a Cytosine Bulge | Descriptor: | DNA (5'-D(*GP*GP*GP*TP*TP*GP*CP*GP*GP*AP*GP*GP*GP*TP*GP*GP*GP*CP*CP*T)-3'), POTASSIUM ION | Authors: | Meier, M, McDougall, M.D, Krahn, N.J, Moya-Torres, A, McRae, E.K.S, Booy, E.P, Patel, T.R, McKenna, S.A, Stetefeld, J. | Deposit date: | 2016-12-18 | Release date: | 2017-11-22 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (1.8802 Å) | Cite: | Structure and hydrodynamics of a DNA G-quadruplex with a cytosine bulge. Nucleic Acids Res., 46, 2018
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1BUB
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![BU of 1bub by Molmil](/molmil-images/mine/1bub) | |
2K0V
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![BU of 2k0v by Molmil](/molmil-images/mine/2k0v) | High Resolution Solution NMR Structures of Undamaged DNA Dodecamer Duplex | Descriptor: | DNA (5'-D(*DCP*DCP*DTP*DCP*DTP*DGP*DGP*DTP*DCP*DTP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DAP*DGP*DAP*DCP*DCP*DAP*DGP*DAP*DGP*DG)-3') | Authors: | Bhattacharyya, D, King, C.L, Chaney, S.G, Campbell, S.L. | Deposit date: | 2008-02-15 | Release date: | 2009-02-03 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Flanking Bases Influence the Nature of DNA Distortion by Platinum 1,2-Intrastrand (GG) Cross-Links. Plos One, 6, 2011
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1D81
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![BU of 1d81 by Molmil](/molmil-images/mine/1d81) | |