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PDB: 18 results

4UNM
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BU of 4unm by Molmil
Structure of Galactose Oxidase homologue from Streptomyces lividans
Descriptor: ACETATE ION, COPPER (II) ION, SECRETED PROTEIN
Authors:Chaplin, A.K, Hough, M.A, Worrall, J.A.R.
Deposit date:2014-05-29
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Glxa is a New Structural Member of the Radical Copper Oxidase Family and is Required for Glycan Deposition at Hyphal Tips and Morphogenesis of Streptomyces Lividans.
Biochem.J., 469, 2015
5LQI
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BU of 5lqi by Molmil
W288A mutant of GlxA from Streptomyces lividans: apo form
Descriptor: Secreted protein
Authors:Chaplin, A.K, Hough, M.A, Worrall, J.A.R.
Deposit date:2016-08-17
Release date:2017-08-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Active-site maturation and activity of the copper-radical oxidase GlxA are governed by a tryptophan residue.
Biochem. J., 474, 2017
5LXZ
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BU of 5lxz by Molmil
W288A mutant of GlxA from Streptomyces lividans: Cu-bound form
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COPPER (II) ION, ...
Authors:Chaplin, A.K, Hough, M.A, Worrall, J.A.R.
Deposit date:2016-09-23
Release date:2017-07-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:The role of a second-coordination sphere tryptophan residue in the maturation of the catalytic metalloradical site in the auxillary activity family 5 (AA5) GlxA from Streptomyces lividans
to be published
8GLV
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BU of 8glv by Molmil
96-nm repeat unit of doublet microtubules from Chlamydomonas reinhardtii flagella
Descriptor: 28 kDa inner dynein arm light chain, axonemal, AAA+ ATPase domain-containing protein, ...
Authors:Walton, T, Brown, A.
Deposit date:2023-03-23
Release date:2023-05-31
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
7KZN
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BU of 7kzn by Molmil
Outer dynein arm core subcomplex from C. reinhardtii
Descriptor: DC1, DC2, Dynein 11 kDa light chain, ...
Authors:Walton, T, Wu, H, Brown, A.B.
Deposit date:2020-12-10
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of a microtubule-bound axonemal dynein.
Nat Commun, 12, 2021
7KZM
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BU of 7kzm by Molmil
Outer dynein arm bound to doublet microtubules from C. reinhardtii
Descriptor: DC1, DC2, Dynein 11 kDa light chain, ...
Authors:Walton, T, Wu, H, Brown, A.B.
Deposit date:2020-12-10
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure of a microtubule-bound axonemal dynein.
Nat Commun, 12, 2021
8VPQ
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BU of 8vpq by Molmil
The structure of LSD1-CoREST-HDAC1 in complex with KBTBD4IPR310delinsTTYML
Descriptor: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Isoform 2 of Kelch repeat and BTB domain-containing protein 4, ...
Authors:Xie, X, Liau, B, Zheng, N.
Deposit date:2024-01-16
Release date:2024-11-27
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Converging mechanism of UM171 and KBTBD4 neomorphic cancer mutations.
Nature, 639, 2025
8VOJ
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BU of 8voj by Molmil
The Cryo-EM structure of LSD1-CoREST-HDAC1 in complex with KBTBD4 enhanced by UM171 and IP6
Descriptor: (1r,4r)-N~1~-[(7P)-2-benzyl-7-(2-methyl-2H-tetrazol-5-yl)-9H-pyrimido[4,5-b]indol-4-yl]cyclohexane-1,4-diamine, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
Authors:Xie, X, Mao, H, Liau, B, Zheng, N.
Deposit date:2024-01-15
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Asymmetric Engagement of Dimeric CRL3KBTBD4 by the Molecular Glue UM171 Licenses Degradation of HDAC1/2 Complexes
To Be Published
8VRT
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BU of 8vrt by Molmil
The structure of LSD1-CoREST-HDAC1 in complex with KBTBD4R313PRR mutant
Descriptor: Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, Kelch repeat and BTB domain-containing protein 4, ...
Authors:Xie, X, Liau, B, Zheng, N.
Deposit date:2024-01-22
Release date:2024-11-27
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (3.42 Å)
Cite:Converging mechanism of UM171 and KBTBD4 neomorphic cancer mutations.
Nature, 639, 2025
9D1Y
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BU of 9d1y by Molmil
Structure of G75R Ubiquitin bound to KLHDC3-EloB/C
Descriptor: Elongin-B, Elongin-C, GLYCEROL, ...
Authors:Schulman, B.A, Scott, D.C.
Deposit date:2024-08-08
Release date:2024-11-20
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases.
Nat Commun, 15, 2024
9D1Z
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BU of 9d1z by Molmil
Structure of G75Q Ubiquitin bound to KLHDC3-EloB/C
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Elongin-B, Elongin-C, ...
Authors:Schulman, B.A, Scott, D.C.
Deposit date:2024-08-08
Release date:2024-11-20
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases.
Nat Commun, 15, 2024
9D1I
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BU of 9d1i by Molmil
Structure of Ubiquitin bound to KLHDC3-EloB/C
Descriptor: Elongin-B, Elongin-C, GLYCEROL, ...
Authors:Schulman, B.A, Scott, D.C.
Deposit date:2024-08-07
Release date:2024-11-20
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases.
Nat Commun, 15, 2024
9DTG
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BU of 9dtg by Molmil
The cryo-EM structure of apo KBTBD4
Descriptor: Isoform 2 of Kelch repeat and BTB domain-containing protein 4
Authors:Xie, X, Mao, H, Liau, B, Zheng, N.
Deposit date:2024-09-30
Release date:2024-11-27
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (3.83 Å)
Cite:UM171 glues asymmetric CRL3-HDAC1/2 assembly to degrade CoREST corepressors.
Nature, 639, 2025
9DTQ
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BU of 9dtq by Molmil
The structure of HDAC2-CoREST in complex with KBTBD4R313PRR mutant
Descriptor: Histone deacetylase 2, INOSITOL HEXAKISPHOSPHATE, Kelch repeat and BTB domain-containing protein 4, ...
Authors:Xie, X, Liau, B, Zheng, N.
Deposit date:2024-10-01
Release date:2024-11-27
Last modified:2025-06-11
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Converging mechanism of UM171 and KBTBD4 neomorphic cancer mutations.
Nature, 639, 2025
9GGL
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BU of 9ggl by Molmil
Cryo-EM structure of KBTBD4 WT-HDAC2 2:1 complex mediated by molecular glue UM171
Descriptor: (1r,4r)-N~1~-[(7P)-2-benzyl-7-(2-methyl-2H-tetrazol-5-yl)-9H-pyrimido[4,5-b]indol-4-yl]cyclohexane-1,4-diamine, Histone deacetylase 2, Isoform 1 of Kelch repeat and BTB domain-containing protein 4, ...
Authors:Chen, Z, Chi, G, Pike, A.C.W, Montes, B, Bullock, A.N.
Deposit date:2024-08-13
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:Structural mimicry of UM171 and neomorphic cancer mutants co-opts E3 ligase KBTBD4 for HDAC1/2 recruitment.
Nat Commun, 16, 2025
9GGN
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BU of 9ggn by Molmil
Cryo-EM structure of KBTBD4 WT-HDAC2 2:2 complex mediated by molecular glue UM171
Descriptor: (1r,4r)-N~1~-[(7P)-2-benzyl-7-(2-methyl-2H-tetrazol-5-yl)-9H-pyrimido[4,5-b]indol-4-yl]cyclohexane-1,4-diamine, Histone deacetylase 2, Isoform 1 of Kelch repeat and BTB domain-containing protein 4, ...
Authors:Chen, Z, Chi, G, Pike, A.C.W, Montes, B, Bullock, A.N.
Deposit date:2024-08-13
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural mimicry of UM171 and neomorphic cancer mutants co-opts E3 ligase KBTBD4 for HDAC1/2 recruitment.
Nat Commun, 16, 2025
9I2C
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BU of 9i2c by Molmil
Cryo-EM structure of KBTBD4 WT-HDAC2-CoREST1 2:1:1 complex mediated by molecular glue UM171
Descriptor: (1r,4r)-N~1~-[(7P)-2-benzyl-7-(2-methyl-2H-tetrazol-5-yl)-9H-pyrimido[4,5-b]indol-4-yl]cyclohexane-1,4-diamine, Histone deacetylase 2, Isoform 1 of Kelch repeat and BTB domain-containing protein 4, ...
Authors:Chen, Z, Chi, G, Pike, A.C.W, Montes, B, Bullock, A.N.
Deposit date:2025-01-20
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural mimicry of UM171 and neomorphic cancer mutants co-opts E3 ligase KBTBD4 for HDAC1/2 recruitment.
Nat Commun, 16, 2025
9GGM
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BU of 9ggm by Molmil
Cryo-EM structure of KBTBD4 P313PRR mutant-HDAC2 2:2 complex
Descriptor: Histone deacetylase 2, Isoform 1 of Kelch repeat and BTB domain-containing protein 4, ZINC ION
Authors:Chen, Z, Chi, G, Pike, A.C.W, Montes, B, Bullock, A.N.
Deposit date:2024-08-13
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (2.71 Å)
Cite:Structural mimicry of UM171 and neomorphic cancer mutants co-opts E3 ligase KBTBD4 for HDAC1/2 recruitment.
Nat Commun, 16, 2025

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PDB entries from 2025-06-11

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