Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 201 results

1ZZB
DownloadVisualize
BU of 1zzb by Molmil
Crystal Structure of CoII HppE in Complex with Substrate
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, COBALT (II) ION, Hydroxypropylphosphonic Acid Epoxidase
Authors:Higgins, L.J, Yan, F, Liu, P, Liu, H.W, Drennan, C.L.
Deposit date:2005-06-13
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme
Nature, 437, 2005
1ZZ8
DownloadVisualize
BU of 1zz8 by Molmil
Crystal Structure of FeII HppE in Complex with Substrate Form 2
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, FE (II) ION, Hydroxypropylphosphonic Acid Epoxidase
Authors:Higgins, L.J, Yan, F, Liu, P, Liu, H.W, Drennan, C.L.
Deposit date:2005-06-13
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme
Nature, 437, 2005
1Y9Q
DownloadVisualize
BU of 1y9q by Molmil
Crystal Structure of HTH_3 family Transcriptional Regulator from Vibrio cholerae
Descriptor: D-METHIONINE, ZINC ION, transcriptional regulator, ...
Authors:Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-16
Release date:2005-01-04
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of HTH_3 family Transcriptional Regulator from Vibrio cholerae
To be Published
2AXV
DownloadVisualize
BU of 2axv by Molmil
Structure of PrgX Y153C mutant
Descriptor: PrgX
Authors:Shi, K, Brown, C.K, Gu, Z.Y, Kozlowicz, B.K, Dunny, G.M, Ohlendorf, D.H, Earhart, C.A.
Deposit date:2005-09-06
Release date:2005-12-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZZC
DownloadVisualize
BU of 1zzc by Molmil
Crystal Structure of CoII HppE in Complex with Tris Buffer
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COBALT (II) ION, hydroxypropylphosphonic acid epoxidase
Authors:Higgins, L.J, Yan, F, Liu, P, Liu, H.W, Drennan, C.L.
Deposit date:2005-06-13
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme
Nature, 437, 2005
1ZZ6
DownloadVisualize
BU of 1zz6 by Molmil
Crystal Structure of Apo-HppE
Descriptor: Hydroxypropylphosphonic Acid Epoxidase
Authors:Higgins, L.J, Yan, F, Liu, P, Liu, H.W, Drennan, C.L.
Deposit date:2005-06-13
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme
Nature, 437, 2005
1ZZ9
DownloadVisualize
BU of 1zz9 by Molmil
Crystal Structure of FeII HppE
Descriptor: FE (II) ION, Hydroxypropylphosphonic Acid Epoxidase, SULFATE ION
Authors:Higgins, L.J, Yan, F, Liu, P, Liu, H.W, Drennan, C.L.
Deposit date:2005-06-13
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme
Nature, 437, 2005
1ZZ7
DownloadVisualize
BU of 1zz7 by Molmil
Crystal Structure of FeII HppE in Complex with Substrate form 1
Descriptor: (S)-2-HYDROXYPROPYLPHOSPHONIC ACID, FE (II) ION, Hydroxyprophylphosphonic Acid Epoxidase
Authors:Higgins, L.J, Yan, F, Liu, P, Liu, H.W, Drennan, C.L.
Deposit date:2005-06-13
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into antibiotic fosfomycin biosynthesis by a mononuclear iron enzyme
Nature, 437, 2005
2AXZ
DownloadVisualize
BU of 2axz by Molmil
Crystal structure of PrgX/cCF10 complex
Descriptor: LVTLVFV peptide, PrgX, TPPKEVT(MSE) peptide
Authors:Shi, K, Brown, C.K, Gu, Z.Y, Kozlowicz, B.K, Dunny, G.M, Ohlendorf, D.H, Earhart, C.A.
Deposit date:2005-09-06
Release date:2005-12-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of peptide sex pheromone receptor PrgX and PrgX/pheromone complexes and regulation of conjugation in Enterococcus faecalis.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4FSC
DownloadVisualize
BU of 4fsc by Molmil
Crystal Structure of Bacillus thuringiensis PlcR in its apo form
Descriptor: Transcriptional activator PlcR protein
Authors:Grenha, R, Slamti, L, Bouillaut, L, Lereclus, D, Nessler, S.
Deposit date:2012-06-27
Release date:2013-03-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:Structural basis for the activation mechanism of the PlcR virulence regulator by the quorum-sensing signal peptide PapR.
Proc.Natl.Acad.Sci.USA, 110, 2013
4J1X
DownloadVisualize
BU of 4j1x by Molmil
Crystal Structure of Fe(II)-HppE with alternative substrate (S)-1-HPP
Descriptor: Epoxidase, FE (II) ION, GLYCEROL, ...
Authors:Drennan, C.L, Dey, M.
Deposit date:2013-02-03
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanistic studies of an unprecedented enzyme-catalysed 1,2-phosphono-migration reaction.
Nature, 496, 2013
4J1W
DownloadVisualize
BU of 4j1w by Molmil
Crystal Structure of Fe(II)-HppE with alternative substrate (R)-1-HPP
Descriptor: Epoxidase, FE (II) ION, GLYCEROL, ...
Authors:Drennan, C.L, Dey, M.
Deposit date:2013-02-03
Release date:2013-04-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Mechanistic studies of an unprecedented enzyme-catalysed 1,2-phosphono-migration reaction.
Nature, 496, 2013
2P5T
DownloadVisualize
BU of 2p5t by Molmil
Molecular and structural characterization of the PezAT chromosomal toxin-antitoxin system of the human pathogen Streptococcus pneumoniae
Descriptor: PezT, Putative transcriptional regulator PezA, fragment of PezA helix-turn-helix motif
Authors:Loll, B, Meinhart, A.
Deposit date:2007-03-16
Release date:2007-05-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular and Structural Characterization of the PezAT Chromosomal Toxin-Antitoxin System of the Human Pathogen Streptococcus pneumoniae.
J.Biol.Chem., 282, 2007
2QFC
DownloadVisualize
BU of 2qfc by Molmil
Crystal Structure of Bacillus thuringiensis PlcR complexed with PapR
Descriptor: C-terminus pentapeptide from PapR protein, DI(HYDROXYETHYL)ETHER, PlcR protein
Authors:Declerck, N, Chaix, D, Rugani, N, Hoh, F, Arold, S.T.
Deposit date:2007-06-27
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of PlcR: Insights into virulence regulation and evolution of quorum sensing in Gram-positive bacteria
Proc.Natl.Acad.Sci.Usa, 104, 2007
4YV9
DownloadVisualize
BU of 4yv9 by Molmil
X-ray crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2
Descriptor: Cyclosporin A, SULFATE ION, Transcriptional regulator
Authors:Neiditch, M.B, Parashar, V.
Deposit date:2015-03-19
Release date:2015-04-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rgg protein structure-function and inhibition by cyclic peptide compounds.
Proc.Natl.Acad.Sci.USA, 112, 2015
4YG7
DownloadVisualize
BU of 4yg7 by Molmil
Structure of FL autorepression promoter complex
Descriptor: Antitoxin HipB, DNA (50-MER), Serine/threonine-protein kinase HipA
Authors:Schumacher, M.A.
Deposit date:2015-02-25
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:HipBA-promoter structures reveal the basis of heritable multidrug tolerance.
Nature, 524, 2015
4YV6
DownloadVisualize
BU of 4yv6 by Molmil
X-ray crystal structure of Streptococcus dysgalactiae SHP pheromone receptor Rgg2
Descriptor: SULFATE ION, Transcriptional regulator
Authors:Neiditch, M.B, Parashar, V.
Deposit date:2015-03-19
Release date:2015-04-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.053 Å)
Cite:Rgg protein structure-function and inhibition by cyclic peptide compounds.
Proc.Natl.Acad.Sci.USA, 112, 2015
8C8I
DownloadVisualize
BU of 8c8i by Molmil
Human dUTPase in complex with a potent proteinaceous inhibitor (Stl)
Descriptor: Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, MAGNESIUM ION, ...
Authors:Kohegyi, B.K, Nyiri, K, Vertessy, B.G.
Deposit date:2023-01-20
Release date:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Human dUTPase in complex with a potent proteinaceous inhibitor (Stl)
To Be Published
7NRD
DownloadVisualize
BU of 7nrd by Molmil
Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
Descriptor: 25S rRNA (3184-MER), 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Pochopien, A.A, Beckert, B, Wilson, D.N.
Deposit date:2021-03-03
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:Structure of Gcn1 bound to stalled and colliding 80S ribosomes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7PWJ
DownloadVisualize
BU of 7pwj by Molmil
dUTPase from human in complex with Stl
Descriptor: 1,2-ETHANEDIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, ...
Authors:Sanz-Frasquet, C, Marina, A.
Deposit date:2021-10-06
Release date:2022-12-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.944 Å)
Cite:The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases.
Microbiol Spectr, 11, 2023
7PWX
DownloadVisualize
BU of 7pwx by Molmil
dUTPase from M. tuberculosis in complex with Stl
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Marina, A, Sanz-Frasquet, C.
Deposit date:2021-10-07
Release date:2022-12-28
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The Bacteriophage-Phage-Inducible Chromosomal Island Arms Race Designs an Interkingdom Inhibitor of dUTPases.
Microbiol Spectr, 11, 2023
3BDN
DownloadVisualize
BU of 3bdn by Molmil
Crystal Structure of the Lambda Repressor
Descriptor: DNA (5'-D(*DAP*DAP*DTP*DAP*DCP*DCP*DAP*DCP*DTP*DGP*DGP*DCP*DGP*DGP*DTP*DGP*DAP*DTP*DAP*DT)-3'), DNA (5'-D(*DTP*DAP*DTP*DAP*DTP*DCP*DAP*DCP*DCP*DGP*DCP*DCP*DAP*DGP*DTP*DGP*DGP*DTP*DAP*DT)-3'), Lambda Repressor
Authors:Stayrook, S.E, Jaru-Ampornpan, P, Hochschild, A, Lewis, M.
Deposit date:2007-11-15
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.909 Å)
Cite:Crystal structure of the lambda repressor and a model for pairwise cooperative operator binding
Nature, 452, 2008
6ZVI
DownloadVisualize
BU of 6zvi by Molmil
Mbf1-ribosome complex
Descriptor: 18S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ...
Authors:Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
Deposit date:2020-07-24
Release date:2020-09-09
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020
6ZVH
DownloadVisualize
BU of 6zvh by Molmil
EDF1-ribosome complex
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Best, K.M, Denk, T, Cheng, J, Thoms, M, Berninghausen, O, Beckmann, R.
Deposit date:2020-07-24
Release date:2020-08-19
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:EDF1 coordinates cellular responses to ribosome collisions.
Elife, 9, 2020
7DLV
DownloadVisualize
BU of 7dlv by Molmil
shrimp dUTPase in complex with Stl
Descriptor: CALCIUM ION, Orf20, SULFATE ION, ...
Authors:Ma, Q, Wang, F.
Deposit date:2020-11-30
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.525 Å)
Cite:Structural basis of staphylococcal Stl inhibition on a eukaryotic dUTPase.
Int.J.Biol.Macromol., 184, 2021

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon