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PDB: 21 results

1MMS
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BU of 1mms by Molmil
Crystal structure of the ribosomal PROTEIN L11-RNA complex
Descriptor: 23S RIBOSOMAL RNA, CADMIUM ION, MAGNESIUM ION, ...
Authors:Wimberly, B.T, Guymon, R, Mccutcheon, J.P, White, S.W, Ramakrishnan, V.
Deposit date:1999-04-14
Release date:2000-04-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:A detailed view of a ribosomal active site: the structure of the L11-RNA complex.
Cell(Cambridge,Mass.), 97, 1999
4V42
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BU of 4v42 by Molmil
Crystal structure of the ribosome at 5.5 A resolution.
Descriptor: 30S 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Yusupov, M.M, Yusupova, G.Z, Baucom, A, Lieberman, K, Earnest, T.N, Cate, J.H.D, Noller, H.F.
Deposit date:2001-03-30
Release date:2014-07-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:Crystal structure of the ribosome at 5.5 A resolution
Science, 292, 2001
4V4R
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BU of 4v4r by Molmil
Crystal structure of the whole ribosomal complex.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
Deposit date:2005-09-30
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (5.9 Å)
Cite:Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
4V4T
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Crystal structure of the whole ribosomal complex with a stop codon in the A-site.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
Deposit date:2005-10-12
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (6.46 Å)
Cite:Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
4V4S
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BU of 4v4s by Molmil
Crystal structure of the whole ribosomal complex.
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petry, S, Brodersen, D.E, Murphy IV, F.V, Dunham, C.M, Selmer, M, Tarry, M.J, Kelley, A.C, Ramakrishnan, V.
Deposit date:2005-10-12
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (6.76 Å)
Cite:Crystal Structures of the Ribosome in Complex with Release Factors RF1 and RF2 Bound to a Cognate Stop Codon.
Cell(Cambridge,Mass.), 123, 2005
487D
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BU of 487d by Molmil
SEVEN RIBOSOMAL PROTEINS FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP OF THE LARGE 50S SUBUNIT AT 7.5 ANGSTROMS RESOLUTION
Descriptor: 50S ribosomal protein L1, 50S ribosomal protein L11, 50S ribosomal protein L14, ...
Authors:Brimacombe, R, Mueller, F.
Deposit date:2000-02-23
Release date:2000-04-10
Last modified:2023-06-07
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:The 3D arrangement of the 23 S and 5 S rRNA in the Escherichia coli 50 S ribosomal subunit based on a cryo-electron microscopic reconstruction at 7.5 A resolution.
J.Mol.Biol., 298, 2000
1R2X
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BU of 1r2x by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1R2W
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BU of 1r2w by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1PN7
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BU of 1pn7 by Molmil
Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the 70S Cryo-EM map of E.coli ribosome
Descriptor: 30S ribosomal protein S12, 50S ribosomal protein L11, P-tRNA
Authors:Valle, M, Zavialov, A, Sengupta, J, Rawat, U, Ehrenberg, M, Frank, J.
Deposit date:2003-06-12
Release date:2003-07-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Locking and Unlocking of Ribosomal Motions
Cell(Cambridge,Mass.), 114, 2003
1PN8
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BU of 1pn8 by Molmil
Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into the Cryo-EM map of E.coli 70S.EF-G.GDPNP complex. The atomic coordinates originally from the E-site tRNA were fitted in the position of the hybrid P/E-site tRNA.
Descriptor: 30S ribosomal protein S12, 50S ribosomal protein L11, E-tRNA
Authors:Valle, M, Zavialov, A, Sengupta, J, Rawat, U, Ehrenberg, M, Frank, J.
Deposit date:2003-06-12
Release date:2003-07-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (10.8 Å)
Cite:Locking and Unlocking of Ribosomal Motions
Cell(Cambridge,Mass.), 114, 2003
2BCW
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BU of 2bcw by Molmil
Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-em map of an Escherichia coli 70S*EF-G*GDP*fusidic acid complex
Descriptor: 50S ribosomal protein L11, 50S ribosomal protein L7/L12, Elongation factor G
Authors:Datta, P.P, Sharma, M.R, Qi, L, Frank, J, Agrawal, R.K.
Deposit date:2005-10-19
Release date:2005-12-20
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (11.2 Å)
Cite:Interaction of the G' Domain of Elongation Factor G and the C-Terminal Domain of Ribosomal Protein L7/L12 during Translocation as Revealed by Cryo-EM.
Mol.Cell, 20, 2005
1EG0
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BU of 1eg0 by Molmil
FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOME
Descriptor: FORMYL-METHIONYL-TRNA, FRAGMENT OF 16S RRNA HELIX 23, FRAGMENT OF 23S RRNA, ...
Authors:Gabashvili, I.S, Agrawal, R.K, Spahn, C.M.T, Grassucci, R.A, Svergun, D.I, Frank, J, Penczek, P.
Deposit date:2000-02-11
Release date:2000-03-06
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Solution structure of the E. coli 70S ribosome at 11.5 A resolution.
Cell(Cambridge,Mass.), 100, 2000
1MVR
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BU of 1mvr by Molmil
Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome
Descriptor: 30S RIBOSOMAL PROTEIN S12, 50S ribosomal protein L11, Helix 34 of 16S rRNA, ...
Authors:Rawat, U.B, Zavialov, A.V, Sengupta, J, Valle, M, Grassucci, R.A, Linde, J, Vestergaard, B, Ehrenberg, M, Frank, J.
Deposit date:2002-09-26
Release date:2003-04-01
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12.8 Å)
Cite:A cryo-electron microscopic study of ribosome-bound termination factor RF2
Nature, 421, 2003
1MJ1
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BU of 1mj1 by Molmil
FITTING THE TERNARY COMPLEX OF EF-Tu/tRNA/GTP AND RIBOSOMAL PROTEINS INTO A 13 A CRYO-EM MAP OF THE COLI 70S RIBOSOME
Descriptor: Elongation Factor Tu, L11 ribosomal protein, Phe-tRNA, ...
Authors:Stark, H, Rodnina, M.V, Wieden, H.-J, Zemlin, F, Wintermeyer, W, Vanheel, M.
Deposit date:2002-08-26
Release date:2002-11-01
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (13 Å)
Cite:Ribosome Interactions of Aminoacyl-tRNA and Elongation Factor TU in the Codon Recognition Complex
Nat.Struct.Biol., 9, 2002
1ML5
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BU of 1ml5 by Molmil
Structure of the E. coli ribosomal termination complex with release factor 2
Descriptor: 30S 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, 30S RIBOSOMAL PROTEIN S11, ...
Authors:Klaholz, B.P, Pape, T, Zavialov, A.V, Myasnikov, A.G, Orlova, E.V, Vestergaard, B, Ehrenberg, M, van Heel, M.
Deposit date:2002-08-30
Release date:2003-01-14
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Structure of the Escherichia coli ribosomal termination complex with release factor 2
Nature, 421, 2003
1JQT
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BU of 1jqt by Molmil
Fitting of L11 protein in the low resolution cryo-EM map of E.coli 70S ribosome
Descriptor: 50S Ribosomal protein L11
Authors:Agrawal, R.K, Linde, J, Segupta, J, Nierhaus, K.H, Frank, J.
Deposit date:2001-08-07
Release date:2001-09-07
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
J.Mol.Biol., 311, 2001
1JQM
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BU of 1jqm by Molmil
Fitting of L11 protein and elongation factor G (EF-G) in the cryo-em map of e. coli 70S ribosome bound with EF-G, GDP and fusidic acid
Descriptor: 50S Ribosomal protein L11, Elongation Factor G
Authors:Agrawal, R.K, Linde, J, Segupta, J, Nierhaus, K.H, Frank, J.
Deposit date:2001-08-07
Release date:2001-09-07
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
J.Mol.Biol., 311, 2001
1JQS
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BU of 1jqs by Molmil
Fitting of L11 protein and elongation factor G (domain G' and V) in the cryo-em map of E. coli 70S ribosome bound with EF-G and GMPPCP, a nonhydrolysable GTP analog
Descriptor: 50S Ribosomal protein L11, Elongation Factor G
Authors:Agrawal, R.K, Linde, J, Segupta, J, Nierhaus, K.H, Frank, J.
Deposit date:2001-08-07
Release date:2001-09-07
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
J.Mol.Biol., 311, 2001
1OLN
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BU of 1oln by Molmil
Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA
Descriptor: 50S RIBOSOMAL PROTEIN L11, RNA, THIOSTREPTON
Authors:Lentzen, G, Klinck, R, Matassova, N, Aboul-Ela, F, Murchie, A.I.H.
Deposit date:2003-08-08
Release date:2003-09-11
Last modified:2019-08-21
Method:SOLUTION NMR, THEORETICAL MODEL
Cite:Structural Basis for Contrasting Activities of Ribosome Binding Thiazole Antibiotics
Chem.Biol., 10, 2003
2JQ7
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Model for thiostrepton binding to the ribosomal L11-RNA
Descriptor: 50S RIBOSOMAL PROTEIN L11, RIBOSOMAL RNA, THIOSTREPTON
Authors:Jonker, H.R.A, Ilin, S, Grimm, S.K, Woehnert, J, Schwalbe, H.
Deposit date:2007-05-30
Release date:2007-07-03
Last modified:2021-08-18
Method:SOLUTION NMR
Cite:L11 Domain Rearrangement Upon Binding to RNA and Thiostrepton Studied by NMR Spectroscopy
Nucleic Acids Res., 35, 2007
2K3F
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BU of 2k3f by Molmil
Ribosomal protein L11 from Thermotoga maritima
Descriptor: 50S ribosomal protein L11
Authors:Jonker, H.R.A, Ilin, S, Schwalbe, H, Woehnert, J.
Deposit date:2008-05-06
Release date:2008-06-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Domain reorientation and induced fit upon RNA binding: solution structure and dynamics of ribosomal protein L11 from Thermotoga maritima
ChemBioChem, 6, 2005

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