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PDB: 567 results

4I8H
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BU of 4i8h by Molmil
Bovine trypsin at 0.75 resolution
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-12-03
Release date:2012-12-19
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (0.75 Å)
Cite:On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
5MN1
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BU of 5mn1 by Molmil
Cationic trypsin in complex with 2-aminopyridine (deuterated sample at 100 K)
Descriptor: 2-AMINOPYRIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-12
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.79 Å)
Cite:Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MNK
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BU of 5mnk by Molmil
Cationic trypsin in complex with benzylamine (deuterated sample at 100 K)
Descriptor: BENZYLAMINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.799 Å)
Cite:Cationic trypsin in complex with benzylamine (deuterated sample at 100 K)
to be published
3MFJ
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BU of 3mfj by Molmil
Bovine trypsin at 0.8 A resolution, restrained refinement
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Brzuszkiewicz, A, Dauter, M, Dauter, Z.
Deposit date:2010-04-02
Release date:2010-04-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Bovine trypsin at 0.8 A and role of restraints at ultra-high resolution
To be Published
3MI4
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BU of 3mi4 by Molmil
Bovine trypsin at 0.8 A resolution, non-restrained refinement
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Brzuszkiewicz, A, Dauter, M, Dauter, Z.
Deposit date:2010-04-09
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Bovine trypsin at 0.8 A and role of restraints at ultra-high resolution
To be Published
4I8G
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BU of 4i8g by Molmil
Bovine trypsin at 0.8 resolution
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-12-03
Release date:2012-12-19
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
4I8K
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BU of 4i8k by Molmil
Bovine trypsin at 0.85 resolution
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-12-03
Release date:2012-12-19
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
5MNN
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BU of 5mnn by Molmil
Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 100 K)
Descriptor: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.859 Å)
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MNG
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BU of 5mng by Molmil
Cationic trypsin in complex with benzamidine (deuterated sample at 100 K)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
4I8J
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BU of 4i8j by Molmil
Bovine trypsin at 0.87 A resolution
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-12-03
Release date:2012-12-19
Last modified:2013-09-18
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
4I8L
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BU of 4i8l by Molmil
Bovine trypsin at 0.87 resolution
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Dauter, Z, Liebschner, D, Dauter, M, Brzuszkiewicz, A.
Deposit date:2012-12-03
Release date:2012-12-19
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin.
Acta Crystallogr.,Sect.D, 69, 2013
4XOJ
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BU of 4xoj by Molmil
Structure of bovine trypsin in complex with analogues of sunflower inhibitor 1 (SFTI-1)
Descriptor: 1,2-ETHANEDIOL, AMMONIUM ION, CALCIUM ION, ...
Authors:Golik, P, Malicki, S, Grudnik, P, Karna, N, Debowski, D, Legowska, A, Wladyka, B, Gitlin, A, Brzozowski, K, Dubin, G, Rolka, K.
Deposit date:2015-01-16
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Investigation of Serine-Proteinase-Catalyzed Peptide Splicing in Analogues of Sunflower Trypsin Inhibitor 1 (SFTI-1).
Chembiochem, 16, 2015
5MNC
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BU of 5mnc by Molmil
Cationic trypsin in complex with aniline (deuterated sample at 100 K)
Descriptor: ANILINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.916 Å)
Cite:Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MNH
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BU of 5mnh by Molmil
Cationic trypsin in complex with benzamidine (deuterated sample at 295 K)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MOQ
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BU of 5moq by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with benzamidine
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
Deposit date:2016-12-14
Release date:2018-02-28
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (0.93 Å), X-RAY DIFFRACTION
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
2XTT
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BU of 2xtt by Molmil
Bovine trypsin in complex with evolutionary enhanced Schistocerca gregaria protease inhibitor 1 (SGPI-1-P02)
Descriptor: ACETATE ION, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Wahlgren, W.Y, Pal, G, Kardos, J, Porrogi, P, Szenthe, B, Patthy, A, Graf, L, Katona, G.
Deposit date:2010-10-12
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:The catalytic aspartate is protonated in the Michaelis complex formed between trypsin and an in vitro evolved substrate-like inhibitor: a refined mechanism of serine protease action.
J.Biol.Chem., 286, 2011
5MNB
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BU of 5mnb by Molmil
Cationic trypsin in complex with 2-aminopyridine (deuterated sample at 295 K)
Descriptor: 2-AMINOPYRIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.939 Å)
Cite:Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
5MON
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BU of 5mon by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with 2-aminopyridine
Descriptor: 2-AMINOPYRIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
Deposit date:2016-12-14
Release date:2017-05-24
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (0.939 Å), X-RAY DIFFRACTION
Cite:Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017
6YIV
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BU of 6yiv by Molmil
Trypsin inhibitor in complex with bovine trypsin
Descriptor: Cationic trypsin, DIMETHYL SULFOXIDE, SULFATE ION, ...
Authors:Badran, M.J, Heine, A, Klebe, G.
Deposit date:2020-04-01
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Trypsin inhibitor in complex with bovine trypsin
To Be Published
6SY3
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BU of 6sy3 by Molmil
Cationic Trypsin in Complex with a D-DiPhe-Pro-pyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3,3-diphenyl-propanoyl]-~{N}-(pyridin-4-ylmethyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic Trypsin, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-09-27
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
1HJ9
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BU of 1hj9 by Molmil
Atomic resolution structures of trypsin provide insight into structural radiation damage
Descriptor: ANILINE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Leiros, H.-K.S, McSweeney, S.M, Smalas, A.O.
Deposit date:2001-01-10
Release date:2002-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Atomic Resolution Structure of Trypsin Provide Insight Into Structural Radiation Damage
Acta Crystallogr.,Sect.D, 57, 2001
5MNO
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BU of 5mno by Molmil
Cationic trypsin in complex with N-amidinopiperidine (deuterated sample at 295 K)
Descriptor: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
5MOS
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BU of 5mos by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with N-amidinopiperidine
Descriptor: CALCIUM ION, Cationic trypsin, SULFATE ION, ...
Authors:Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
Deposit date:2016-12-14
Release date:2018-02-28
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (0.96 Å), X-RAY DIFFRACTION
Cite:Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
Nat Commun, 9, 2018
6YIW
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BU of 6yiw by Molmil
Trypsin inhibitor in complex with bovine trypsin
Descriptor: 1H-isoindol-3-amine, CALCIUM ION, Cationic trypsin, ...
Authors:Badran, M.J, Heine, A, Klebe, G.
Deposit date:2020-04-01
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Trypsin inhibitor in complex with bovine trypsin
To Be Published
2AYW
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BU of 2ayw by Molmil
Crystal Structure of the complex formed between trypsin and a designed synthetic highly potent inhibitor in the presence of benzamidine at 0.97 A resolution
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[2-({[4-(DIAMINOMETHYL)PHENYL]AMINO}CARBONYL)-6-METHOXYPYRIDIN-3-YL]-5-{[(1-FORMYL-2,2-DIMETHYLPROPYL)AMINO]CARBONYL}BENZOIC ACID, BENZAMIDINE, ...
Authors:Sherawat, M, Kaur, P, Perbandt, M, Betzel, C, Slusarchyk, W.A, Bisacchi, G.S, Chang, C, Jacobson, B.L, Einspahr, H.M, Singh, T.P.
Deposit date:2005-09-09
Release date:2006-01-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Structure of the complex of trypsin with a highly potent synthetic inhibitor at 0.97 A resolution.
Acta Crystallogr.,Sect.D, 63, 2007

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