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PDB: 15 results

5WXL
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BU of 5wxl by Molmil
Crystal structure of the Rrs1 and Rpf2 complex
Descriptor: Regulator of ribosome biosynthesis, Ribosome biogenesis protein RPF2
Authors:Ye, K, Zheng, S.
Deposit date:2017-01-07
Release date:2017-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular architecture of the 90S small subunit pre-ribosome
Elife, 6, 2017
7UOO
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BU of 7uoo by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-04-13
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7V08
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BU of 7v08 by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-05-10
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.36 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
5A53
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BU of 5a53 by Molmil
Crystal Structure of the Rpf2-Rrs1 complex
Descriptor: REGULATOR OF RIBOSOME BIOSYNTHESIS, RIBOSOME BIOGENESIS PROTEIN RPF2, SULFATE ION
Authors:Madru, C, Lebaron, S, Blaud, M, Delbos, L, Rety, S, Leulliot, N.
Deposit date:2015-06-16
Release date:2015-10-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Chaperoning 5S RNA Assembly.
Genes Dev., 29, 2015
7UQB
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BU of 7uqb by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-04-19
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7UQZ
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BU of 7uqz by Molmil
Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 25S rRNA, 5.8S rRNA, ...
Authors:Sekulski, K, Cruz, V.E, Weirich, C.S, Erzberger, J.P.
Deposit date:2022-04-20
Release date:2023-03-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:rRNA methylation by Spb1 regulates the GTPase activity of Nog2 during 60S ribosomal subunit assembly.
Nat Commun, 14, 2023
7UG6
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BU of 7ug6 by Molmil
Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Yelland, J.N, Bravo, J.P.K, Black, J.J.B, Taylor, D.W, Johnson, A.W.
Deposit date:2022-03-24
Release date:2022-12-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A single 2'-O-methylation of ribosomal RNA gates assembly of a functional ribosome.
Nat.Struct.Mol.Biol., 30, 2023
3JCT
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BU of 3jct by Molmil
Cryo-em structure of eukaryotic pre-60S ribosomal subunits
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Wu, S, Kumcuoglu, B, Yan, K.G, Brown, H, Zhang, Y.X, Tan, D, Gamalinda, M, Yuan, Y, Li, Z.F, Jakovljevic, J, Ma, C.Y, Lei, J.L, Dong, M.Q, Woolford Jr, J.L, Gao, N.
Deposit date:2016-03-09
Release date:2016-06-01
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes
Nature, 534, 2016
7OHQ
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BU of 7ohq by Molmil
Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Milkereit, P, Poell, G.
Deposit date:2021-05-11
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021
7BT6
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BU of 7bt6 by Molmil
Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Li, Y, Wilson, D.M.
Deposit date:2020-03-31
Release date:2020-10-28
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Structural insights into assembly of the ribosomal nascent polypeptide exit tunnel.
Nat Commun, 11, 2020
6M62
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BU of 6m62 by Molmil
Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Li, Y, Micic, J.
Deposit date:2020-03-12
Release date:2020-08-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly.
Nat Commun, 11, 2020
7BTB
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BU of 7btb by Molmil
Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)
Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
Authors:Li, Y, Wilson, D.M.
Deposit date:2020-04-01
Release date:2020-10-28
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural insights into assembly of the ribosomal nascent polypeptide exit tunnel.
Nat Commun, 11, 2020
7OH3
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BU of 7oh3 by Molmil
Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Milkereit, P, Poell, G.
Deposit date:2021-05-08
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021
6FT6
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BU of 6ft6 by Molmil
Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
Descriptor: 25S ribosomal RNA, 5S ribosomal RNA, 60S ribosomal protein L11-A, ...
Authors:Schuller, J.M, Falk, S, Conti, E.
Deposit date:2018-02-20
Release date:2018-03-28
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of the nuclear exosome captured on a maturing preribosome.
Science, 360, 2018
7OHT
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BU of 7oht by Molmil
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Milkereit, P, Poell, G.
Deposit date:2021-05-11
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Plos One, 16, 2021

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