Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2MWO
DownloadVisualize
BU of 2mwo by Molmil
Solution structure of 53BP1 tandem Tudor domains in complex with a p53K370me2 peptide
Descriptor: Cellular tumor antigen p53, Tumor suppressor p53-binding protein 1
Authors:Cui, G, Botuyan, M.V, Mer, G.
Deposit date:2014-11-15
Release date:2014-12-10
Last modified:2015-03-18
Method:SOLUTION NMR
Cite:Structural Plasticity of Methyllysine Recognition by the Tandem Tudor Domain of 53BP1.
Structure, 23, 2015
5TEN
DownloadVisualize
BU of 5ten by Molmil
Structure of 4-Hydroxy-tetrahydrodipicolinate Reductase from Vibrio vulnificus with 2,5 Furan Dicarboxylic and NADH with Intact Polyhistidine Tag
Descriptor: 2,5 Furan Dicarboxylic Acid, 4-hydroxy-tetrahydrodipicolinate reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Mank, N, Pote, S, Arnette, K, Klapper, V, Chruszcz, M.
Deposit date:2016-09-22
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Comparative structural and mechanistic studies of 4-hydroxy-tetrahydrodipicolinate reductases from Mycobacterium tuberculosis and Vibrio vulnificus.
Biochim Biophys Acta Gen Subj, 1865, 2021
5ZW0
DownloadVisualize
BU of 5zw0 by Molmil
Apo-form PigA
Descriptor: L-prolyl-[peptidyl-carrier protein] dehydrogenase
Authors:Lee, C.-C, Ko, T.-P, Wang, A.H.J.
Deposit date:2018-05-14
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal Structure of PigA: A Prolyl Thioester-Oxidizing Enzyme in Prodigiosin Biosynthesis.
Chembiochem, 20, 2019
2MTV
DownloadVisualize
BU of 2mtv by Molmil
Solution Structure of the YTH Domain of YT521-B in complex with N6-Methyladenosine containing RNA
Descriptor: RNA_(5'-R(*UP*GP*(6MZ)P*CP*AP*C)-3'), YTH domain-containing protein 1
Authors:Theler, D, Dominguez, C, Blatter, M, Boudet, J, Allain, F.H.-T.
Deposit date:2014-09-01
Release date:2014-11-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in complex with N6-methyladenosine RNA: a reader of methylated RNA.
Nucleic Acids Res., 42, 2014
5ZXE
DownloadVisualize
BU of 5zxe by Molmil
Structure of a consensus sequence derived from the FGF family
Descriptor: CHLORIDE ION, Consensus sequence based basic form of fibroblast growth factor, GLYCEROL, ...
Authors:Tripathi, S.K, Mandalaparthy, V, Ramaswamy, S, Gosavi, S.
Deposit date:2018-05-19
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of a consensus sequence derived from the FGF family
To be published
4XW1
DownloadVisualize
BU of 4xw1 by Molmil
Crystal structure of (GCCU(G-LNA)CCUG)2 duplex
Descriptor: RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*G)-3')
Authors:Kiliszek, A, Banaszak, K, Rypniewski, W.
Deposit date:2015-01-28
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
6A4K
DownloadVisualize
BU of 6a4k by Molmil
Human antibody 32D6 Fab in complex with H1N1 influenza A virus HA1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Lee, C.C, Ko, T.P, Lin, L.L, Wang, A.H.J.
Deposit date:2018-06-20
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:An Effective Neutralizing Antibody Against Influenza Virus H1N1 from Human B Cells.
Sci Rep, 9, 2019
2N2X
DownloadVisualize
BU of 2n2x by Molmil
Solution structure of [GlyB24,B27-B29 triazole cross-linked]-insulin analogue at pH 1.9
Descriptor: Insulin A chain, Insulin B chain
Authors:Veverka, V, Hexnerova, R, Jiracek, J.
Deposit date:2015-05-15
Release date:2016-02-03
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Rational steering of insulin binding specificity by intra-chain chemical crosslinking.
Sci Rep, 6, 2016
4Y0S
DownloadVisualize
BU of 4y0s by Molmil
Goat beta-lactoglobulin complex with pramocaine (GLG-PRM)
Descriptor: Beta-lactoglobulin, Pramocaine, SULFATE ION
Authors:Loch, J.I, Bonarek, P, Polit, A, Jablonski, M, Czub, M, Ye, X, Lewinski, K.
Deposit date:2015-02-06
Release date:2015-07-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:beta-Lactoglobulin interactions with local anaesthetic drugs - Crystallographic and calorimetric studies.
Int.J.Biol.Macromol., 80, 2015
4Y0Y
DownloadVisualize
BU of 4y0y by Molmil
Trypsin in complex with with BPTI
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
Deposit date:2015-02-06
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
2MP9
DownloadVisualize
BU of 2mp9 by Molmil
Solution structure of an potent antifungal peptide Cm-p5 derived from C. muricatus
Descriptor: Antifungal peptide
Authors:Sun, Z.J, Heffron, G, Mcbeth, C, Wagner, G, Otero-Gonzales, A.J, Starnbach, M.N.
Deposit date:2014-05-14
Release date:2015-08-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Cm-p5: an antifungal hydrophilic peptide derived from the coastal mollusk Cenchritis muricatus (Gastropoda: Littorinidae).
Faseb J., 29, 2015
6A0C
DownloadVisualize
BU of 6a0c by Molmil
Structure of a triple-helix region of human collagen type III
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, collagen type III peptide
Authors:Yang, X, Zhu, Y, Ye, S, Zhang, R.
Deposit date:2018-06-05
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Characterization by high-resolution crystal structure analysis of a triple-helix region of human collagen type III with potent cell adhesion activity.
Biochem. Biophys. Res. Commun., 508, 2019
2N3W
DownloadVisualize
BU of 2n3w by Molmil
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode
Descriptor: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
Authors:Chen, X, Walters, K.J.
Deposit date:2015-06-10
Release date:2016-02-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
4Y15
DownloadVisualize
BU of 4y15 by Molmil
SdiA in complex with 3-oxo-C6-homoserine lactone
Descriptor: 3-oxo-N-[(3S)-2-oxotetrahydrofuran-3-yl]hexanamide, SULFATE ION, Transcriptional regulator of ftsQAZ gene cluster
Authors:Nguyen, N.X, Nguyen, Y, Sperandio, V, Jiang, Y.
Deposit date:2015-02-06
Release date:2015-04-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.835 Å)
Cite:Structural and Mechanistic Roles of Novel Chemical Ligands on the SdiA Quorum-Sensing Transcription Regulator.
Mbio, 6, 2015
6A7F
DownloadVisualize
BU of 6a7f by Molmil
The cryo-EM structure of filamentous bacteriophage IKe major coat protein p8 shell assembly.
Descriptor: major coat protein p8
Authors:Xu, J.W, Dayan, N, Goldbourt, A, Xiang, Y.
Deposit date:2018-07-03
Release date:2019-02-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-electron microscopy structure of the filamentous bacteriophage IKe.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
2N4F
DownloadVisualize
BU of 2n4f by Molmil
EC-NMR Structure of Arabidopsis thaliana At2g32350 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target AR3433A
Descriptor: uncharacterized protein AR3433A
Authors:Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-06-17
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
4Y2R
DownloadVisualize
BU of 4y2r by Molmil
Structure of soluble epoxide hydrolase in complex with 2-(piperazin-1-yl)nicotinonitrile
Descriptor: 2-(piperazin-1-yl)pyridine-3-carbonitrile, Bifunctional epoxide hydrolase 2, MAGNESIUM ION
Authors:Amano, Y, Yamaguchi, T.
Deposit date:2015-02-10
Release date:2015-05-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Identification of N-ethylmethylamine as a novel scaffold for inhibitors of soluble epoxide hydrolase by crystallographic fragment screening
Bioorg.Med.Chem., 23, 2015
6A18
DownloadVisualize
BU of 6a18 by Molmil
Crystal structure of CYP90B1 in complex with 1,6-hexandiol
Descriptor: CHLORIDE ION, Cytochrome P450 90B1, GLYCEROL, ...
Authors:Fujiyama, K, Hino, T, Kanadani, M, Mizutani, M, Nagano, S.
Deposit date:2018-06-06
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural insights into a key step of brassinosteroid biosynthesis and its inhibition.
Nat.Plants, 5, 2019
6A1K
DownloadVisualize
BU of 6a1k by Molmil
Phosphate acyltransferase PlsX from B.subtilis
Descriptor: Phosphate acyltransferase, SULFATE ION
Authors:Guo, Z, Jiang, Y.
Deposit date:2018-06-07
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of an amphipathic peptide sensor of the Bacillus subtilisfluid membrane microdomains.
Commun Biol, 2, 2019
4Y37
DownloadVisualize
BU of 4y37 by Molmil
Endothiapepsin in complex with fragement 305
Descriptor: 4-chloro-2-methylthieno[2,3-d][1,2,3]diazaborinin-1(2H)-ol, ACETATE ION, Endothiapepsin, ...
Authors:Krimmer, S.G, Heine, A, Klebe, G.
Deposit date:2015-02-10
Release date:2016-02-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystallographic Fragment Screening of an Entire Library
To Be Published
2N2A
DownloadVisualize
BU of 2n2a by Molmil
Spatial structure of HER2/ErbB2 dimeric transmembrane domain in the presence of cytoplasmic juxtamembrane domains
Descriptor: Receptor tyrosine-protein kinase erbB-2
Authors:Bragin, P.E, Mineev, K.S, Bocharov, E, Bocharova, O, Arseniev, A.
Deposit date:2015-05-05
Release date:2016-02-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:HER2 Transmembrane Domain Dimerization Coupled with Self-Association of Membrane-Embedded Cytoplasmic Juxtamembrane Regions.
J.Mol.Biol., 428, 2016
5TMP
DownloadVisualize
BU of 5tmp by Molmil
COMPLEX OF E. COLI THYMIDYLATE KINASE WITH THE BISUBSTRATE INHIBITOR AZTP5A
Descriptor: P1-(5'-ADENOSYL)P5-(5'-(3'AZIDO-3'-DEOXYTHYMIDYL))PENTAPHOSPHATE, PROTEIN (THYMIDYLATE KINASE)
Authors:Lavie, A, Ostermann, N, Schlichting, I.
Deposit date:1998-09-01
Release date:1998-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for efficient phosphorylation of 3'-azidothymidine monophosphate by Escherichia coli thymidylate kinase.
Proc.Natl.Acad.Sci.USA, 95, 1998
2N52
DownloadVisualize
BU of 2n52 by Molmil
The solution structure of the kallikrein inhibitor SPINK6
Descriptor: Serine protease inhibitor Kazal-type 6
Authors:Grotzinger, J.
Deposit date:2015-07-06
Release date:2016-03-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The solution structure of the kallikrein-related peptidases inhibitor SPINK6.
Biochem.Biophys.Res.Commun., 471, 2016
2MRP
DownloadVisualize
BU of 2mrp by Molmil
NMR solution structure of the Ubiquitin like domain (UBL) of DNA-damage-inducible 1 protein (Ddi1)
Descriptor: DNA damage-inducible protein 1
Authors:Nowicka, U, Fushman, D, Chen, T.
Deposit date:2014-07-14
Release date:2015-03-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
6A6N
DownloadVisualize
BU of 6a6n by Molmil
Crystal structure of an inward-open apo state of the eukaryotic ABC multidrug transporter CmABCB1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ATP-binding cassette, sub-family B, ...
Authors:Kato, H, Nakatsu, T, Kodan, A.
Deposit date:2018-06-28
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Inward- and outward-facing X-ray crystal structures of homodimeric P-glycoprotein CmABCB1.
Nat Commun, 10, 2019

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon