Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Q6G
DownloadVisualize
BU of 4q6g by Molmil
Crystal Structure of the C-terminal domain of AcKRS-1 bound with N-acetyl-lysine and ADPNP
Descriptor: 1,2-ETHANEDIOL, N(6)-ACETYLLYSINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Eiler, D.R, Kavran, J, Steitz, T.A.
Deposit date:2014-04-22
Release date:2014-11-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Polyspecific pyrrolysyl-tRNA synthetases from directed evolution.
Proc.Natl.Acad.Sci.USA, 111, 2014
2AS1
DownloadVisualize
BU of 2as1 by Molmil
cytochrome c peroxidase in complex with thiopheneamidine
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K.
Deposit date:2005-08-22
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Probing molecular docking in a charged model binding site.
J.Mol.Biol., 357, 2006
6NNG
DownloadVisualize
BU of 6nng by Molmil
Tubulin-RB3_SLD-TTL in complex with compound DJ95
Descriptor: 2-(1H-indol-6-yl)-4-(3,4,5-trimethoxyphenyl)-1H-imidazo[4,5-c]pyridine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Kumar, G, Wang, Y, Li, W, White, S.W.
Deposit date:2019-01-15
Release date:2019-07-10
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Colchicine Binding Site Agent DJ95 Overcomes Drug Resistance and Exhibits Antitumor Efficacy.
Mol.Pharmacol., 96, 2019
4D2D
DownloadVisualize
BU of 4d2d by Molmil
Structure of a tri peptide bound POT family peptide transporter
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ALANINE-TRIPEPTIDE, ...
Authors:Lyons, J.A, Parker, J.L, Solcan, N, Brinth, A, Li, D, Shah, S.T.A, Caffrey, M, Newstead, S.
Deposit date:2014-05-09
Release date:2014-06-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Structural Basis for Polyspecificity in the Pot Family of Proton-Coupled Oligopeptide Transporters.
Embo Rep., 15, 2014
4D8W
DownloadVisualize
BU of 4d8w by Molmil
Salmonella typhimurium D-Cysteine desulfhydrase soaked with D-cys shows pyruvate bound 4 A away from active site
Descriptor: 1,2-ETHANEDIOL, BENZAMIDINE, CHLORIDE ION, ...
Authors:Bharath, S.R, Shveta, B, Rajesh, K.H, Savithri, H.S, Murthy, M.R.N.
Deposit date:2012-01-11
Release date:2012-05-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase.
Plos One, 7, 2012
6CNU
DownloadVisualize
BU of 6cnu by Molmil
Crystal Structure of JzTX-V
Descriptor: BROMIDE ION, GLYCEROL, JzTx-V, ...
Authors:Min, X, Wang, Z.
Deposit date:2018-03-09
Release date:2019-03-06
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Discovery of Tarantula Venom-Derived NaV1.7-Inhibitory JzTx-V Peptide 5-Br-Trp24 Analogue AM-6120 with Systemic Block of Histamine-Induced Pruritis.
J. Med. Chem., 61, 2018
6NBB
DownloadVisualize
BU of 6nbb by Molmil
Horse liver alcohol dehydrogenase determined using single-particle cryo-EM at 200 keV
Descriptor: Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Herzik Jr, M.A, Wu, M, Lander, G.C.
Deposit date:2018-12-06
Release date:2019-03-13
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-resolution structure determination of sub-100 kDa complexes using conventional cryo-EM.
Nat Commun, 10, 2019
6CJL
DownloadVisualize
BU of 6cjl by Molmil
Candida albicans Hsp90 nucleotide binding domain in complex with radicicol
Descriptor: Heat shock protein 90 homolog, MAGNESIUM ION, RADICICOL
Authors:Nation, C, Pizarro, J.C.
Deposit date:2018-02-26
Release date:2019-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6972 Å)
Cite:Structural basis for species-selective targeting of Hsp90 in a pathogenic fungus.
Nat Commun, 10, 2019
1FWV
DownloadVisualize
BU of 1fwv by Molmil
CRYSTAL STRUCTURE OF THE CYSTEINE-RICH DOMAIN OF MANNOSE RECEPTOR COMPLEXED WITH 3-SO4-LEWIS(A)
Descriptor: 3-O-sulfo-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, CYSTEINE-RICH DOMAIN OF MANNOSE RECEPTOR
Authors:Liu, Y, Misulovin, Z, Bjorkman, P.J.
Deposit date:2000-09-24
Release date:2001-01-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The molecular mechanism of sulfated carbohydrate recognition by the cysteine-rich domain of mannose receptor.
J.Mol.Biol., 305, 2001
4HN4
DownloadVisualize
BU of 4hn4 by Molmil
Tryptophan synthase in complex with alpha aminoacrylate E(A-A) form and the F9 inhibitor in the alpha site
Descriptor: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, BICINE, ...
Authors:Hilario, E, Niks, D, Dunn, M.F, Mueller, L.J, Fan, L.
Deposit date:2012-10-18
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states.
Biochemistry, 52, 2013
6NX9
DownloadVisualize
BU of 6nx9 by Molmil
ECAII(D90T,K162T) MUTANT IN COMPLEX WITH CITRATE AT PH 7
Descriptor: ACETIC ACID, GLYCEROL, IMIDAZOLE, ...
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-02-08
Release date:2019-08-07
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Opportunistic complexes of E. coli L-asparaginases with citrate anions.
Sci Rep, 9, 2019
6U3L
DownloadVisualize
BU of 6u3l by Molmil
Crystal structure of Hemerythrin HHE cation binding domain-containing protein: Rv2633c homolog from Mycobacterium kansasii
Descriptor: 1,2-ETHANEDIOL, Hemerythrin HHE cation binding domain protein
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-08-22
Release date:2020-01-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a hemerythrin-like protein from Mycobacterium kansasii and homology model of the orthologous Rv2633c protein of M. tuberculosis.
Biochem.J., 477, 2020
2DQY
DownloadVisualize
BU of 2dqy by Molmil
Crystal structure of human carboxylesterase in complex with cholate and palmitate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLIC ACID, Liver carboxylesterase 1, ...
Authors:Bencharit, S, Edwards, C.C, Morton, C.L, Howard-Williams, E.L, Potter, P.M, Redinbo, M.R.
Deposit date:2006-06-02
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Multisite promiscuity in the processing of endogenous substrates by human carboxylesterase 1
J.Mol.Biol., 363, 2006
4CQ0
DownloadVisualize
BU of 4cq0 by Molmil
Cyclic secondary sulfonamides: unusually good inhibitors of cancer- related carbonic anhydrase enzymes
Descriptor: 6-amino-1,2-benzothiazol-3(2H)-one 1,1-dioxide, CARBONIC ANHYDRASE 2, FORMIC ACID, ...
Authors:Moeker, J, Peat, T.S, Bornaghi, L.F, Vullo, D, Supuran, C.T, Poulsen, S.
Deposit date:2014-02-10
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Cyclic Secondary Sulfonamides: Unusually Good Inhibitors of Cancer-Related Carbonic Anhydrase Enzymes.
J.Med.Chem., 57, 2014
4HPX
DownloadVisualize
BU of 4hpx by Molmil
Crystal structure of Tryptophan Synthase at 1.65 A resolution in complex with alpha aminoacrylate E(A-A) and benzimidazole in the beta site and the F9 inhibitor in the alpha site
Descriptor: 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, BENZIMIDAZOLE, ...
Authors:Hilario, E, Niks, D, Dunn, M.F, Mueller, L.J, Fan, L.
Deposit date:2012-10-24
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states.
Biochemistry, 52, 2013
4CO9
DownloadVisualize
BU of 4co9 by Molmil
Crystal structure of kynurenine formamidase from Bacillus anthracis
Descriptor: 1,4-DIETHYLENE DIOXIDE, KYNURENINE FORMAMIDASE, MAGNESIUM ION, ...
Authors:Diaz-Saez, L, Srikannathasan, V, Zoltner, M, Hunter, W.N.
Deposit date:2014-01-27
Release date:2014-04-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of Bacterial Kynurenine Formamidase Reveals a Crowded Binuclear-Zinc Catalytic Site Primed to Generate a Potent Nucleophile.
Biochem.J., 462, 2014
6NPT
DownloadVisualize
BU of 6npt by Molmil
TRK-A IN COMPLEX WITH LIGAND 1
Descriptor: 4-tert-butyl-N-(1,3-diphenyl-1H-pyrazol-5-yl)benzamide, High affinity nerve growth factor receptor
Authors:Subramanian, G.
Deposit date:2019-01-18
Release date:2019-05-22
Last modified:2019-07-10
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Deciphering the Allosteric Binding Mechanism of the Human Tropomyosin Receptor Kinase A ( hTrkA) Inhibitors.
Acs Chem.Biol., 14, 2019
6NX7
DownloadVisualize
BU of 6nx7 by Molmil
ECAII(D90T,K162T) MUTANT IN COMPLEX WITH CITRATE AT PH 5.6
Descriptor: ACETIC ACID, CITRIC ACID, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-02-08
Release date:2019-08-07
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Opportunistic complexes of E. coli L-asparaginases with citrate anions.
Sci Rep, 9, 2019
4DB5
DownloadVisualize
BU of 4db5 by Molmil
Crystal structure of Rabbit GITRL
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tumor necrosis factor ligand superfamily member 18
Authors:Kumar, P.R, Bhosle, R, Gizzi, A, Scott Glenn, A, Chowhury, S, Hillerich, B, Seidel, R, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2012-01-13
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.522 Å)
Cite:Crystal structure of GITRL from Oryctolagus cuniculus
to be published
4DC5
DownloadVisualize
BU of 4dc5 by Molmil
Crystal Structure of Thaumatin Unexposed to Excessive SONICC Imaging Laser Dose.
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
Authors:Mulichak, A.M, Becker, M, Kissick, D.J, Keefe, L.J, Fischetti, R.F, Simpson, G.J.
Deposit date:2012-01-17
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Towards protein-crystal centering using second-harmonic generation (SHG) microscopy.
Acta Crystallogr.,Sect.D, 69, 2013
6NX1
DownloadVisualize
BU of 6nx1 by Molmil
STRUCTURE OF HUMAN PREGNANE X RECEPTOR LIGAND BINDING DOMAIN BOUND TETHERED WITH SRC CO-ACTIVATOR PEPTIDE AND COMPOUND-3 AKA 1,1,1,3,3,3-HEXAFLUORO-2-{4-[1-(4- LUOROBENZENESULFONYL)CYCLOPENTYL]PHENYL}PROPAN-2-OL
Descriptor: 1,1,1,3,3,3-hexafluoro-2-(4-{1-[(4-fluorophenyl)sulfonyl]cyclopentyl}phenyl)propan-2-ol, Nuclear receptor subfamily 1 group I member 2,Nuclear receptor coactivator 1 fusion
Authors:Khan, J.A.
Deposit date:2019-02-07
Release date:2020-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structure-based Discovery of Phenyl (3-Phenylpyrrolidin-3-yl)sulfones as Selective, Orally Active ROR gamma t Inverse Agonists.
Acs Med.Chem.Lett., 10, 2019
6NXB
DownloadVisualize
BU of 6nxb by Molmil
ECAII IN COMPLEX WITH CITRATE AT PH 7
Descriptor: CITRIC ACID, GLYCEROL, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-02-08
Release date:2019-08-07
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Opportunistic complexes of E. coli L-asparaginases with citrate anions.
Sci Rep, 9, 2019
6NXQ
DownloadVisualize
BU of 6nxq by Molmil
Crystal structure of Arabidopsis thaliana cytosolic triosephosphate isomerase C13A mutant
Descriptor: SODIUM ION, Triosephosphate isomerase, cytosolic
Authors:Jimenez-Sandoval, P, Diaz-Quezada, C, Torres-Larios, A, Brieba, L.G.
Deposit date:2019-02-09
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural basis for the modulation of plant cytosolic triosephosphate isomerase activity by mimicry of redox-based modifications.
Plant J., 99, 2019
6NWC
DownloadVisualize
BU of 6nwc by Molmil
PYL10 bound to the ABA pan-agonist 3CB
Descriptor: 1-{[(4-cyano-3-cyclopropylphenyl)acetyl]amino}cyclohexane-1-carboxylic acid, Abscisic acid receptor PYL10
Authors:Peterson, F.C, Vaidya, A, Jensen, D.R, Volkman, B.F, Cutler, S.R.
Deposit date:2019-02-06
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Dynamic control of plant water use using designed ABA receptor agonists.
Science, 366, 2019
6NX6
DownloadVisualize
BU of 6nx6 by Molmil
ECAII(D90T,K162T) MUTANT IN COMPLEX WITH CITRATE AT PH 5
Descriptor: ACETIC ACID, CITRIC ACID, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-02-08
Release date:2019-08-07
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Opportunistic complexes of E. coli L-asparaginases with citrate anions.
Sci Rep, 9, 2019

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon