PDB: 35415 resultsInfo pagesStatus searchChemie searchBIRD

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8OYP	Crystal structure of Ubiquitin specific protease 11 (USP11) in complex with a substrate mimetic Descriptor: CADMIUM ION, CHLORIDE ION, GLYCEROL, ... Authors: Maurer, S.K, Caulton, S.G, Ward, S.J, Emsley, J, Dreveny, I. Deposit date: 2023-05-05 Release date: 2023-10-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.44 Å) Cite: Ubiquitin-specific protease 11 structure in complex with an engineered substrate mimetic reveals a molecular feature for deubiquitination selectivity. J.Biol.Chem., 299, 2023
4X2L	Crystal structure of human BACE-1 bound to Compound 6 Descriptor: (4S)-4-(2,4-difluorophenyl)-4-methyl-5,6-dihydro-4H-1,3-thiazin-2-amine, Beta-secretase 1, DIMETHYL SULFOXIDE, ... Authors: Vajdos, F.F, Parris, K. Deposit date: 2014-11-26 Release date: 2015-03-04 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Discovery of a Series of Efficient, Centrally Efficacious BACE1 Inhibitors through Structure-Based Drug Design. J.Med.Chem., 58, 2015
8HGB	Crystal structure of the CYP199A4 mutant F182G in complex with 3-hydroxy-4-methoxybenzoic acid Descriptor: 4-methoxy-3-oxidanyl-benzoic acid, Cytochrome P450, GLYCEROL, ... Authors: Jiang, Y, Cong, Z. Deposit date: 2022-11-14 Release date: 2023-11-22 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Crystal structure of the CYP199A4 mutant F182G in complex with 3-hydroxy-4-methoxybenzoic acid To Be Published
5DF0	Crystal structure of AcMNPV Chitinase A in complex WITH CHITOTRIO-THIAZOLINE DITHIOAMIDE Descriptor: (2R,3aR,5R,6R,7R,7aR)-5-(hydroxymethyl)-2-methylhexahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-2-(ethanethioylamino)-beta-D-glucopyranose, ... Authors: Mou, T.-C, Sprang, S.R. Deposit date: 2015-08-26 Release date: 2016-09-07 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.251 Å) Cite: Crystal structure of AcMNPV Chitinase A To Be Published
8P33	BB0238 from Borrelia burgdorferi Descriptor: BB0238 Authors: Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U. Deposit date: 2023-05-16 Release date: 2023-10-11 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A unique borrelial protein facilitates microbial immune evasion. Mbio, 14, 2023
8HGE	Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei in complex with 12-hydroxydodecanoic acid Descriptor: 12-HYDROXYDODECANOIC ACID, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE Authors: Jiang, Y, Cong, Z. Deposit date: 2022-11-14 Release date: 2023-11-22 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei in complex with 12-hydroxydodecanoic acid To Be Published
8HGD	Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei Descriptor: Cytochrome P450, GLYCEROL, METHANOL, ... Authors: Jiang, Y, Cong, Z. Deposit date: 2022-11-14 Release date: 2023-11-22 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Crystal structure of the CYP153A mutant V456A from Marinobacter aquaeolei To Be Published
8P32	BB0238 from Borrelia burgdorferi, Se-Met data for Leu240Met mutant Descriptor: BB0238 Authors: Brangulis, K, Foor, S.D, Shakya, A.K, Rana, V.S, Bista, S, Kitsou, C, Ronzetti, M, Linden, S.B, Altieri, A.S, Akopjana, I, Baljinnyam, B, Nelson, D.C, Simeonov, A, Herzberg, O, Caimano, M.J, Pal, U. Deposit date: 2023-05-16 Release date: 2023-10-11 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.15 Å) Cite: A unique borrelial protein facilitates microbial immune evasion. Mbio, 14, 2023
4X67	Crystal structure of elongating yeast RNA polymerase II stalled at oxidative Cyclopurine DNA lesions. Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... Authors: Wang, L, Chong, J, Wang, D. Deposit date: 2014-12-07 Release date: 2015-02-04 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (4.1 Å) Cite: Mechanism of RNA polymerase II bypass of oxidative cyclopurine DNA lesions. Proc.Natl.Acad.Sci.USA, 112, 2015
5D0F	Crystal Structure of the Candida Glabrata Glycogen Debranching Enzyme (E564Q) in complex with maltopentaose Descriptor: Uncharacterized protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... Authors: Zhai, L, Xiang, S. Deposit date: 2015-08-03 Release date: 2016-05-18 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Crystal structure of glycogen debranching enzyme and insights into its catalysis and disease-causing mutations. Nat Commun, 7, 2016
8HRR	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K/F100V) in complex with NADP Descriptor: 1,2-ETHANEDIOL, Glyceraldehyde-3-phosphate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Authors: Son, H.F, Kim, K.J. Deposit date: 2022-12-15 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRO	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NAD Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Son, H.F, Kim, K.J. Deposit date: 2022-12-15 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (2.59 Å) Cite: Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRT	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K/F100V/P192S) in complex with NADP Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, ... Authors: Son, H.F, Kim, K.J. Deposit date: 2022-12-15 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HMN	Crystal structure of GAPDH complexed with arsenate from Lactiplantibacillus plantarum Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ARSENATE, ... Authors: Yoneda, K, Kinoshita, H. Deposit date: 2022-12-05 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Crystal structure of GAPDH complexed with arsenate from Lactiplantibacillus plantarum To Be Published
4RQ7	Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG)and dATP soaked with MgCl2 for 1hr Descriptor: ACETATE ION, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... Authors: Vyas, R, Reed, A.J, Suo, Z. Deposit date: 2014-10-31 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
5D3E	Crystal structure of human 14-3-3 gamma in complex with CFTR R-domain peptide pS768-pS795 Descriptor: 14-3-3 protein gamma, Cystic fibrosis transmembrane conductance regulator Authors: Stevers, L.M, Leysen, S.F.R, Ottmann, C. Deposit date: 2015-08-06 Release date: 2016-03-16 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Characterization and small-molecule stabilization of the multisite tandem binding between 14-3-3 and the R domain of CFTR. Proc.Natl.Acad.Sci.USA, 113, 2016
8HRQ	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K) in complex with NAD Descriptor: 1,2-ETHANEDIOL, CESIUM ION, GLYCEROL, ... Authors: Son, H.F, Kim, K.J. Deposit date: 2022-12-15 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRS	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 (L36S/T37K/P192S) in complex with NADP Descriptor: GLYCEROL, Glyceraldehyde-3-phosphate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Authors: Son, H.F, Kim, K.J. Deposit date: 2022-12-15 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
8HRP	Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NAD and G3P Descriptor: 1,2-ETHANEDIOL, GLYCERALDEHYDE-3-PHOSPHATE, GLYCEROL, ... Authors: Son, H.F, Kim, K.J. Deposit date: 2022-12-15 Release date: 2023-12-06 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structure-Guided Protein Engineering of Glyceraldehyde-3-phosphate Dehydrogenase from Corynebacterium glutamicum for Dual NAD/NADP Cofactor Specificity. J.Agric.Food Chem., 71, 2023
6W1O	RT XFEL structure of the dark-stable state of Photosystem II (0F, S1-rich) at 2.08 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Ibrahim, M, Fransson, T, Chatterjee, R, Cheah, M.H, Hussein, R, Lassalle, L, Sutherlin, K.D, Young, I.D, Fuller, F.D, Gul, S, Kim, I.-S, Simon, P.S, de Lichtenberg, C, Chernev, P, Bogacz, I, Pham, C, Orville, A.M, Saichek, N, Northen, T.R, Batyuk, A, Carbajo, S, Alonso-Mori, R, Tono, K, Owada, S, Bhowmick, A, Bolotovski, R, Mendez, D, Moriarty, N.W, Holton, J.M, Dobbek, H, Brewster, A.S, Adams, P.D, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yachandra, V.K, Yano, J. Deposit date: 2020-03-04 Release date: 2020-05-20 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.08 Å) Cite: Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism. Proc.Natl.Acad.Sci.USA, 117, 2020
6D3Q	Crystal structure of Escherichia coli enolase complexed with a natural inhibitor SF2312. Descriptor: Enolase, GLYCEROL, MAGNESIUM ION, ... Authors: Erlandsen, H, Krucinska, J, Hazeen, A, Wright, D. Deposit date: 2018-04-16 Release date: 2019-11-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.24 Å) Cite: Functional and structural basis of E. coli enolase inhibition by SF2312: a mimic of the carbanion intermediate. Sci Rep, 9, 2019
4TM0	Kutzneria sp. 744 ornithine N-hydroxylase, KtzI-FADred-ox-NADP+-L-orn Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, KtzI, L-ornithine, ... Authors: Setser, J.W, Drennan, C.L. Deposit date: 2014-05-30 Release date: 2014-09-17 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Crystallographic Evidence of Drastic Conformational Changes in the Active Site of a Flavin-Dependent N-Hydroxylase. Biochemistry, 53, 2014
6VYO	Crystal structure of RNA binding domain of nucleocapsid phosphoprotein from SARS coronavirus 2 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ... Authors: Chang, C, Michalska, K, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Kim, Y, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2020-02-27 Release date: 2020-03-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Epitopes recognition of SARS-CoV-2 nucleocapsid RNA binding domain by human monoclonal antibodies. Iscience, 27, 2024
5D8W	Structrue of a lucidum protein Descriptor: Endoglucanase Authors: Guo, R, Li, Q, Shang, N, Liu, G, Ko, T.P, Chen, C.C, Liu, W. Deposit date: 2015-08-18 Release date: 2016-06-29 Last modified: 2018-05-23 Method: X-RAY DIFFRACTION (2.86 Å) Cite: Functional and structural analyses of a 1,4-beta-endoglucanase from Ganoderma lucidum. Enzyme.Microb.Technol., 86, 2016
8HOO	Crystal structure of the P450 BM3 heme domain mutant F87A in complex with Im-C6-Tyr-Nap Descriptor: Bifunctional cytochrome P450/NADPH--P450 reductase, Im-C6-Tyr-Nap, PROTOPORPHYRIN IX CONTAINING FE Authors: Jiang, Y, Dong, S, Feng, Y, Cong, Z. Deposit date: 2022-12-10 Release date: 2023-12-13 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Crystal structure of the P450 BM3 heme domain mutant F87A in complex with Im-C6-Tyr-Nap To Be Published

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