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5KIE
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BU of 5kie by Molmil
Structural impact of single ribonucleotides in DNA
Descriptor: DNA (5'-D(*GP*AP*GP*CP*TP*CP*CP*AP*T)-3'), DNA/RNA (5'-D(*AP*TP*GP*GP*A)-R(P*G)-D(P*CP*TP*C)-3')
Authors:Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W.
Deposit date:2016-06-16
Release date:2016-08-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
6O1Q
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BU of 6o1q by Molmil
The N-terminal domain of NPHP1 folds into an antiparallel three-stranded coiled coil
Descriptor: Nephrocystin-1
Authors:Musco, G, Mannella, V.
Deposit date:2019-02-21
Release date:2019-08-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The N-Terminal Domain of NPHP1 Folds into a Monomeric Left-Handed Antiparallel Three-Stranded Coiled Coil with Anti-apoptotic Function.
Acs Chem.Biol., 14, 2019
6NBS
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BU of 6nbs by Molmil
WT ERK2 with compound 2507-8
Descriptor: (5S)-5-benzyl-4,5-dihydro-1H-imidazol-2-amine, GLYCEROL, Mitogen-activated protein kinase 1, ...
Authors:Sammons, R.M, Perry, N.A, Cho, E.J, Kaoud, T.S, Zamora-Olivares, D.P, Piserchio, A, Houghten, R.A, Giulianotti, M, Li, Y, Debevec, G, Gurevich, V.V, Ghose, R, Iverson, T.M, Dalby, K.N.
Deposit date:2018-12-10
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Novel Class of Common Docking Domain Inhibitors That Prevent ERK2 Activation and Substrate Phosphorylation.
Acs Chem.Biol., 14, 2019
5KIH
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BU of 5kih by Molmil
Structural impact of single ribonucleotides in DNA
Descriptor: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA/RNA (5'-D(*TP*TP*AP*G)-R(P*G)-D(P*CP*CP*TP*G)-3')
Authors:Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W.
Deposit date:2016-06-16
Release date:2016-08-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
5KIB
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BU of 5kib by Molmil
Structural impact of single ribonucleotides in DNA
Descriptor: DNA (5'-D(*CP*AP*GP*GP*CP*CP*TP*AP*A)-3'), DNA/RNA (5'-D(*TP*TP*AP*G)-R(P*G)-D(P*CP*CP*TP*G)-3')
Authors:Evich, M, Spring-Connell, A.M, Storici, F, Germann, M.W.
Deposit date:2016-06-16
Release date:2016-08-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Impact of Single Ribonucleotide Residues in DNA.
Chembiochem, 17, 2016
4DOM
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BU of 4dom by Molmil
Crystal Structure of the TIR-domain of Human Myeloid Differentiation Primary Response protein (MyD88)
Descriptor: Myeloid differentiation primary response protein MyD88
Authors:Jiang, J.S, Snyder, G.A, Xiao, T.
Deposit date:2012-02-09
Release date:2013-04-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Molecular mechanisms for the subversion of MyD88 signaling by TcpC from virulent uropathogenic Escherichia coli.
Proc.Natl.Acad.Sci.USA, 110, 2013
5K57
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BU of 5k57 by Molmil
HDD domain from human Ddi2
Descriptor: Protein DDI1 homolog 2
Authors:Veverka, V.
Deposit date:2016-05-23
Release date:2016-08-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.
Sci Rep, 6, 2016
5KKF
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BU of 5kkf by Molmil
Crystal structure of TEM1 beta-lactamase mutant I263L
Descriptor: Beta-lactamase TEM
Authors:Roose, B.W, Dmochowski, I.J.
Deposit date:2016-06-21
Release date:2017-06-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase.
Chemphyschem, 2018
6NM1
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BU of 6nm1 by Molmil
The crystal structure of the Staphylococcus aureus Fatty acid Kinase (Fak) B1 protein A158L mutant to 2.33 Angstrom resolution exhibits a conformation change compared to the wild type form
Descriptor: Fatty acid Kinase (Fak) B1 protein, MYRISTIC ACID
Authors:Cuypers, M.G, Gullett, J.M, Subramanian, C, Ericson, M, White, S.W, Rock, C.O.
Deposit date:2019-01-10
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Identification of structural transitions in bacterial fatty acid binding proteins that permit ligand entry and exit at membranes.
J.Biol.Chem., 298, 2022
7AV6
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BU of 7av6 by Molmil
FAST in a domain-swapped dimer form
Descriptor: FORMIC ACID, Photoactive yellow protein
Authors:Bukhdruker, S, Remeeva, A, Ruchkin, D, Gorbachev, D, Povarova, N, Mineev, K, Goncharuk, S, Baranov, M, Mishin, A, Borshchevskiy, V.
Deposit date:2020-11-04
Release date:2021-06-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.
Chem Sci, 12, 2021
6NXL
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BU of 6nxl by Molmil
Ubiquitin binding variants
Descriptor: Polyubiquitin-B
Authors:Miller, D.J, Watson, E.R.
Deposit date:2019-02-08
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.803 Å)
Cite:Protein engineering of a ubiquitin-variant inhibitor of APC/C identifies a cryptic K48 ubiquitin chain binding site.
Proc.Natl.Acad.Sci.USA, 116, 2019
6O1E
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BU of 6o1e by Molmil
The crystal structure of human MORC3 ATPase-CW in complex with AMPPNP
Descriptor: MAGNESIUM ION, MORC family CW-type zinc finger protein 3, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Klein, B.J, Zhang, Y, Kutateladze, T.G.
Deposit date:2019-02-19
Release date:2019-03-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Mechanism for autoinhibition and activation of the MORC3 ATPase.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5JLX
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BU of 5jlx by Molmil
AntpHD with 15bp DNA duplex S-monothioated at Cytidine-8
Descriptor: DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*(C7S)P*AP*TP*TP*AP*GP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3'), Homeotic protein antennapedia, ...
Authors:White, M.A, Zandarashvili, L, Iwahara, J, Nguyen, D.
Deposit date:2016-04-27
Release date:2016-06-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.748 Å)
Cite:Stereospecific Effects of Oxygen-to-Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein-DNA Affinity.
Chembiochem, 17, 2016
7BV6
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BU of 7bv6 by Molmil
Crystal structure of the autophagic STX17/SNAP29/VAMP8 SNARE complex
Descriptor: Synaptosomal-associated protein 29, Syntaxin-17, Vesicle-associated membrane protein 8
Authors:Li, Y, Pan, L.F.
Deposit date:2020-04-09
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Decoding three distinct states of the Syntaxin17 SNARE motif in mediating autophagosome-lysosome fusion.
Proc.Natl.Acad.Sci.USA, 117, 2020
6NAF
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BU of 6naf by Molmil
De novo designed homo-trimeric amantadine-binding protein
Descriptor: (3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine, SODIUM ION, amantadine-binding protein
Authors:Selvaraj, B, Park, J, Cuneo, M.J, Myles, D.A.A, Baker, D.
Deposit date:2018-12-05
Release date:2019-12-18
Last modified:2023-10-25
Method:NEUTRON DIFFRACTION (1.923 Å), X-RAY DIFFRACTION
Cite:De novo design of a homo-trimeric amantadine-binding protein.
Elife, 8, 2019
5JG9
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BU of 5jg9 by Molmil
Crystal structure of the de novo mini protein gEHEE_06
Descriptor: CHLORIDE ION, GLYCEROL, de novo design, ...
Authors:Rupert, P.B, Johnsen, W.A.
Deposit date:2016-04-19
Release date:2016-09-28
Last modified:2016-11-02
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Accurate de novo design of hyperstable constrained peptides.
Nature, 538, 2016
6N5W
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BU of 6n5w by Molmil
Crystal structure of the Ca2+/CaM complex with independent peptides of Kv7.4 (KCNQ4) A & B domains
Descriptor: CALCIUM ION, Calmodulin-1, Potassium voltage-gated channel subfamily KQT member 4
Authors:Taylor, A.B, Archer, C.R, Shapiro, M.S.
Deposit date:2018-11-22
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A mutually induced conformational fit underlies Ca2+-directed interactions between calmodulin and the proximal C terminus of KCNQ4 K+channels.
J. Biol. Chem., 294, 2019
4EYT
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BU of 4eyt by Molmil
Crystal structure of the C-terminal domain of Tetrahymena telomerase protein p65
Descriptor: SULFATE ION, Telomerase associated protein p65
Authors:Singh, M, Wang, Z, Koo, B.-K, Patel, A, Cascio, D, Collins, K, Feigon, J.
Deposit date:2012-05-01
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Telomerase RNA Recognition and RNP Assembly by the Holoenzyme La Family Protein p65.
Mol.Cell, 47, 2012
4F02
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BU of 4f02 by Molmil
Crystal structure of the PABP-binding site of eIF4G in complex with RRM1-2 of PABP and poly(A)
Descriptor: Eukaryotic translation initiation factor 4 gamma 1, Polyadenylate-binding protein 1, RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
Authors:Safaee, N, Kozlov, G, Gehring, K.B.
Deposit date:2012-05-03
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interdomain Allostery Promotes Assembly of the Poly(A) mRNA Complex with PABP and eIF4G.
Mol.Cell, 48, 2012
7C8S
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BU of 7c8s by Molmil
Crystal structure of DUSP22 mutant_N128A
Descriptor: Dual specificity protein phosphatase 22, SULFATE ION
Authors:Lai, C.H, Lyu, P.C.
Deposit date:2020-06-03
Release date:2020-10-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structural Insights into the Active Site Formation of DUSP22 in N-loop-containing Protein Tyrosine Phosphatases.
Int J Mol Sci, 21, 2020
6N87
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BU of 6n87 by Molmil
Plasmodium falciparum FVO apical membrane antigen 1 (AMA1) bound to MTSL spin-labelled cyclised RON2 peptide
Descriptor: Apical membrane antigen-1, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, backbone-cyclised peptide bcRON2hp
Authors:McGowan, S, Drinkwater, N.
Deposit date:2018-11-28
Release date:2019-01-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.588 Å)
Cite:Identification of the Binding Site of Apical Membrane Antigen 1 (AMA1) Inhibitors Using a Paramagnetic Probe.
ChemMedChem, 14, 2019
6MWM
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BU of 6mwm by Molmil
Bat coronavirus HKU4 SUD-C
Descriptor: Non-structural protein 3
Authors:Staup, A.J, De Silva, I.U, Catt, J.T, Tan, X, Hammond, R.G, Johnson, M.A.
Deposit date:2018-10-29
Release date:2019-09-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the SARS-Unique Domain C From the Bat Coronavirus HKU4.
Nat Prod Commun, 14, 2019
6NY8
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BU of 6ny8 by Molmil
Crystal structure of computationally designed protein XAA_GVDQ with calcium
Descriptor: CALCIUM ION, CHLORIDE ION, Design construct XAA_GVDQ
Authors:Wei, K.Y, Bick, M.J.
Deposit date:2019-02-11
Release date:2020-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Computational design of closely related proteins that adopt two well-defined but structurally divergent folds.
Proc.Natl.Acad.Sci.USA, 117, 2020
6OPI
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BU of 6opi by Molmil
phosphorylated ERK2 with SCH-CPD336
Descriptor: (3R)-N-[3-(2-cyclopropylpyridin-4-yl)-1H-indazol-5-yl]-3-(methoxymethyl)-1-(2-oxo-2-{4-[4-(pyrimidin-2-yl)phenyl]-3,6-dihydropyridin-1(2H)-yl}ethyl)pyrrolidine-3-carboxamide, Mitogen-activated protein kinase 1
Authors:Vigers, G.P, Smith, D.
Deposit date:2019-04-25
Release date:2019-07-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Activation loop dynamics are controlled by conformation-selective inhibitors of ERK2.
Proc.Natl.Acad.Sci.USA, 116, 2019
4BPG
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BU of 4bpg by Molmil
Crystal structure of Bacillus subtilis DltC
Descriptor: D-ALANINE--POLY(PHOSPHORIBITOL) LIGASE SUBUNIT 2
Authors:Yonus, H, Zimmermann, S, Neumann, P, Stubbs, M.T.
Deposit date:2013-05-26
Release date:2014-06-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-Resolution Structures of the D-Alanyl Carrier Protein (Dcp) Dltc from Bacillus Subtilis Reveal Equivalent Conformations of Apo- and Holo-Forms
FEBS Lett., 589, 2015

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數據於2024-07-17公開中

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