PDB: 19260 resultsInfo pagesStatus searchChemie searchBIRD

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3RES	Crystal structure of E coli Hfq in complex with ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein hfq Authors: Wang, W.W, Wu, J.H, Shi, Y.Y. Deposit date: 2011-04-05 Release date: 2011-10-19 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Cooperation of Escherichia coli Hfq hexamers in DsrA binding. Genes Dev., 25, 2011
3PRP	Structural analysis of a viral OTU domain protease from the Crimean-Congo Hemorrhagic Fever virus in complex with human ubiquitin Descriptor: Polyubiquitin-B (Fragment), RNA-directed RNA polymerase L Authors: Capodagli, G.C, McKercher, M.A, Baker, E.A, Masters, E.M, Brunzelle, J.S, Pegan, S.D. Deposit date: 2010-11-30 Release date: 2011-01-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.699 Å) Cite: Structural analysis of a viral ovarian tumor domain protease from the crimean-congo hemorrhagic Fever virus in complex with covalently bonded ubiquitin. J.Virol., 85, 2011
3PTO	Crystal Structure of an empty Vesicular Stomatitis Virus Nucleocapsid Protein Complex Descriptor: Nucleoprotein, URANYL (VI) ION Authors: Luo, M, Green, T.J, Rowse, M. Deposit date: 2010-12-03 Release date: 2011-01-12 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.008 Å) Cite: Access to RNA Encapsidated in the Nucleocapsid of Vesicular Stomatitis Virus. J.Virol., 85, 2011
3PUH	Cocaine Esterase, wild-type biologically active dimer Descriptor: Cocaine esterase, GLYCEROL, SULFATE ION Authors: Nance, M.R, Tesmer, J.J.G. Deposit date: 2010-12-04 Release date: 2011-09-21 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Subunit stabilization and polyethylene glycolation of cocaine esterase improves in vivo residence time. Mol.Pharmacol., 80, 2011
3PW3	Crystal structure of a cysteine protease (BDI_2249) from Parabacteroides distasonis ATCC 8503 at 2.23 A resolution Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Aminopeptidase C, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2010-12-07 Release date: 2010-12-22 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2.23 Å) Cite: Crystal structure of a cysteine protease (BDI_2249) from Parabacteroides distasonis ATCC 8503 at 2.23 A resolution To be published
3Q0Y	N-terminal domain of C. reinhardtii SAS-6 homolog Bld12p Descriptor: Centriole protein Authors: Kitagawa, D, Vakonakis, I, Olieric, N, Hilbert, M, Keller, D, Olieric, V, Bortfeld, M, Erat, M.C, Flueckiger, I, Goenczy, P, Steinmetz, M.O. Deposit date: 2010-12-16 Release date: 2011-02-09 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis of the 9-fold symmetry of centrioles. Cell(Cambridge,Mass.), 144, 2011
3Q3Z	Structure of a c-di-GMP-II riboswitch from C. acetobutylicum bound to c-di-GMP Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, c-di-GMP-II riboswitch Authors: Smith, K.D, Shanahan, C.A, Moore, E.L, Simon, A.C, Strobel, S.A. Deposit date: 2010-12-22 Release date: 2011-05-11 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.51 Å) Cite: Structural basis of differential ligand recognition by two classes of bis-(3'-5')-cyclic dimeric guanosine monophosphate-binding riboswitches. Proc.Natl.Acad.Sci.USA, 108, 2011
3Q6W	Structure of dually-phosphorylated MET receptor kinase in complex with an MK-2461 analog with specificity for the activated receptor Descriptor: 3-{5-oxo-3-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-5H-benzo[4,5]cyclohepta[1,2-b]pyridin-7-yl}-N-(pyridin-2-ylmethyl)propanamide, Hepatocyte growth factor receptor Authors: Soisson, S.M, Rickert, K.W, Patel, S.B, Lumb, K.J. Deposit date: 2011-01-03 Release date: 2011-01-19 Last modified: 2017-11-08 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural basis for selective small molecule kinase inhibition of activated c-Met. J.Biol.Chem., 286, 2011
3Q9G	VQIVY segment from Alzheimer's tau displayed on 42-membered macrocycle scaffold Descriptor: ACETIC ACID, Cyclic pseudo-peptide VQIV(4BF)(ORN)(HAO)KL(ORN), GLYCEROL Authors: Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J. Deposit date: 2011-01-07 Release date: 2011-06-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics. J.Am.Chem.Soc., 133, 2011
3Q9J	AIIFL segment derived from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold Descriptor: CHLORIDE ION, Cyclic pseudo-peptide AIIFL(ORN)(HAO)YK(ORN), GLYCEROL, ... Authors: Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J. Deposit date: 2011-01-07 Release date: 2011-06-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics. J.Am.Chem.Soc., 133, 2011
3QA0	Crystal structure of the apo-form of human CK2 alpha at pH 6.5 Descriptor: 1,2-ETHANEDIOL, Casein kinase II subunit alpha, SULFATE ION Authors: Battistutta, R, Ranchio, A, Papinutto, E. Deposit date: 2011-01-10 Release date: 2012-01-11 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural and functional analysis of the flexible regions of the catalytic alpha-subunit of protein kinase CK2 To be Published
3Q6T	Salivary protein from Lutzomyia longipalpis, Ligand free Descriptor: 43.2 kDa salivary protein, CITRIC ACID Authors: Andersen, J.F, Xu, X, Chang, B.W, Collin, N, Valenzuela, J.G, Ribeiro, J.M. Deposit date: 2011-01-03 Release date: 2011-07-27 Last modified: 2019-10-23 Method: X-RAY DIFFRACTION (2.93 Å) Cite: Structure and function of a "yellow" protein from saliva of the sand fly Lutzomyia longipalpis that confers protective immunity against Leishmania major infection. J.Biol.Chem., 286, 2011
3Q8C	Crystal structure of Protective Antigen W346F (pH 5.5) Descriptor: CALCIUM ION, Protective antigen Authors: Lovell, S, Battaile, K.P, Rajapaksha, M, Janowiak, B.E, Andra, K.K, Bann, J.G. Deposit date: 2011-01-06 Release date: 2012-02-15 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.85 Å) Cite: pH effects on binding between the anthrax protective antigen and the host cellular receptor CMG2. Protein Sci., 21, 2012
3Q9O	Full-length Cholix toxin from Vibrio cholerae in complex with NAD Descriptor: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, exotoxin A Authors: Merrill, A.R, Jorgensen, R, Fieldhouse, R.J. Deposit date: 2011-01-09 Release date: 2012-01-04 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.793 Å) Cite: The 1.8 a cholix toxin crystal structure in complex with NAD+ and evidence for a new kinetic model. J.Biol.Chem., 287, 2012
3QAV	Crystal structure of a glutathione S-transferase from Antarctic clam Laternula elliptica Descriptor: Rho-class glutathione S-transferase Authors: Park, A.K, Moon, J.H, Chi, Y.M. Deposit date: 2011-01-12 Release date: 2012-02-01 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The structure of a shellfish specific GST class glutathione S-transferase from antarctic bivalve Laternula elliptica reveals novel active site architecture. Proteins, 81, 2013
3QCG	Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3-bromo-4-chlorobenzyl)sulfanyl]thiophene-2-carboxylic acid Descriptor: 3-[(3-bromo-4-chlorobenzyl)sulfanyl]thiophene-2-carboxylic acid, ACETIC ACID, Receptor-type tyrosine-protein phosphatase gamma Authors: Sheriff, S. Deposit date: 2011-01-16 Release date: 2011-12-28 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop J.Med.Chem., 54, 2011
3QCQ	Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 6-(3-Amino-1H-indazol-6-yl)-N4-ethyl-2,4-pyrimidinediamine Descriptor: 3-phosphoinositide-dependent protein kinase 1, 6-(3-amino-2H-indazol-6-yl)-N~4~-ethylpyrimidine-2,4-diamine, GLYCEROL, ... Authors: Medina, J.R, Becker, C.J, Blackledge, C.W, Duquenne, C, Feng, Y, Grant, S.W, Heerding, D, Li, W.H, Miller, W.H, Romeril, S.P, Scherzer, D, Shu, A, Bobko, M.A, Chadderton, A.R, Dumble, M, Gradiner, C.M, Gilbert, S, Liu, Q, Rabindran, S.K, Sudakin, V, Xiang, H, Brady, P.G, Campobasso, N, Ward, P, Axten, J.M. Deposit date: 2011-01-17 Release date: 2011-03-09 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.501 Å) Cite: Structure-Based Design of Potent and Selective 3-Phosphoinositide-Dependent Kinase-1 (PDK1) Inhibitors. J.Med.Chem., 54, 2011
3QBY	Crystal structure of the PWWP domain of human Hepatoma-derived growth factor 2 Descriptor: H4K20me3 Histone H4 Peptide, Hepatoma-derived growth factor-related protein 2, SULFATE ION, ... Authors: Zeng, H, Tempel, W, Amaya, M.F, Adams-Cioaba, M.A, Mackenzie, F, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC) Deposit date: 2011-01-14 Release date: 2011-02-09 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural and Histone Binding Ability Characterizations of Human PWWP Domains. Plos One, 6, 2011
3QC6	GspB Descriptor: CALCIUM ION, GLYCEROL, NITROGEN MOLECULE, ... Authors: Pyburn, T.M. Deposit date: 2011-01-15 Release date: 2011-08-10 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: A Structural Model for Binding of the Serine-Rich Repeat Adhesin GspB to Host Carbohydrate Receptors. Plos Pathog., 7, 2011
3QCF	Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid via co-crystallization Descriptor: 3-[(3,4-dichlorobenzyl)sulfanyl]thiophene-2-carboxylic acid, Receptor-type tyrosine-protein phosphatase gamma, SULFATE ION Authors: Sheriff, S. Deposit date: 2011-01-16 Release date: 2011-12-28 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop J.Med.Chem., 54, 2011
3QCT	Crystal structure of the humanized apo LT3015 anti-lysophosphatidic acid antibody Fab fragment Descriptor: LT3015 antibody Fab fragment, heavy chain, light chain, ... Authors: Fleming, J.K, Wojciak, J.M, Campbell, M.-A, Huxford, T. Deposit date: 2011-01-17 Release date: 2011-03-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.1493 Å) Cite: Biochemical and structural characterization of lysophosphatidic Acid binding by a humanized monoclonal antibody. J.Mol.Biol., 408, 2011
3QG1	Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, V-type ATP synthase alpha chain Authors: Ragunathan, P, Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G. Deposit date: 2011-01-24 Release date: 2011-10-05 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance. J.Mol.Biol., 413, 2011
3QGH	Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide Descriptor: N-cyclopropyl-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide, PHOSPHATE ION, RNA-directed RNA polymerase Authors: Sheriff, S. Deposit date: 2011-01-24 Release date: 2011-04-20 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Investigation of the mode of binding of a novel series of N-benzyl-4-heteroaryl-1-(phenylsulfonyl)piperazine-2-carboxamides to the hepatitis C virus polymerase. Bioorg.Med.Chem.Lett., 21, 2011
3QGI	Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide Descriptor: GLYCEROL, N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide, RNA-directed RNA polymerase Authors: Sheriff, S. Deposit date: 2011-01-24 Release date: 2011-04-20 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Investigation of the mode of binding of a novel series of N-benzyl-4-heteroaryl-1-(phenylsulfonyl)piperazine-2-carboxamides to the hepatitis C virus polymerase. Bioorg.Med.Chem.Lett., 21, 2011
3QH9	Human Liprin-beta2 Coiled-Coil Descriptor: AMMONIUM ION, GLYCEROL, IODIDE ION, ... Authors: Stafford, R.L, Tang, M, Phillips, M.L, Bowie, J.U. Deposit date: 2011-01-25 Release date: 2011-10-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Crystal structure of the central coiled-coil domain from human liprin-beta2 Biochemistry, 50, 2011

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