Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4WOL
DownloadVisualize
BU of 4wol by Molmil
Crystal Structure of the DAP12 transmembrane domain in lipidic cubic phase
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, POTASSIUM ION, TYRO protein tyrosine kinase-binding protein
Authors:Call, M.J, Call, M.E, Knoblich, K.
Deposit date:2014-10-16
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Transmembrane Complexes of DAP12 Crystallized in Lipid Membranes Provide Insights into Control of Oligomerization in Immunoreceptor Assembly.
Cell Rep, 11, 2015
7XMN
DownloadVisualize
BU of 7xmn by Molmil
Structure of SARS-CoV-2 ORF8
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Maltodextrin-binding protein, ...
Authors:Chen, X, Xu, W.
Deposit date:2022-04-26
Release date:2023-05-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycosylated, Lipid-Binding, CDR-Like Domains of SARS-CoV-2 ORF8 Indicate Unique Sites of Immune Regulation.
Microbiol Spectr, 11, 2023
5FSC
DownloadVisualize
BU of 5fsc by Molmil
Structure of tectonin 2 from Laccaria bicolor in complex with allyl- alpha_4-methyl-mannoside
Descriptor: MAGNESIUM ION, TECTONIN 2, prop-2-en-1-yl 4-O-methyl-alpha-D-mannopyranoside
Authors:Sommer, R, Bleuer, S, Titz, A, Kunzler, M, Varrot, A.
Deposit date:2016-01-04
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of Fungal Tectonin in Complex with O-Methylated Glycans Suggest Key Role in Innate Immune Defense.
Structure, 26, 2018
2X9B
DownloadVisualize
BU of 2x9b by Molmil
The filamentous phages fd and IF1 use different infection mechanisms
Descriptor: ATTACHMENT PROTEIN G3P
Authors:Lorenz, S.H, Jakob, R.P, Weininger, U, Dobbek, H, Schmid, F.X.
Deposit date:2010-03-15
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:The Filamentous Phages Fd and If1 Use Different Mechanisms to Infect Escherichia Coli.
J.Mol.Biol., 405, 2011
5N9U
DownloadVisualize
BU of 5n9u by Molmil
Dehydroascorbate reductase 3A from Populus trichocarpa complexed with GSH.
Descriptor: Dehydroascorbate reductase family protein, GLUTATHIONE
Authors:Roret, T, Tsan, P.
Deposit date:2017-02-27
Release date:2017-03-08
Last modified:2019-05-08
Method:SOLUTION NMR
Cite:Insights into ascorbate regeneration in plants: investigating the redox and structural properties of dehydroascorbate reductases from Populus trichocarpa.
Biochem.J., 473, 2016
4Y9W
DownloadVisualize
BU of 4y9w by Molmil
Aspartic Proteinase Sapp2 Secreted from Candida Parapsilosis at 0.82 A Resolution.
Descriptor: Aspartic acid endopeptidase Sapp2, PEPTIDE
Authors:Dostal, J, Brynda, J, Hruskova-Heidingsfeldova, O, Rezacova, P, Mareckova, L, Pichova, I.
Deposit date:2015-02-17
Release date:2016-11-30
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:Atomic resolution crystal structure of Sapp2p, a secreted aspartic protease from Candida parapsilosis.
Acta Crystallogr.,Sect.D, 71, 2015
6TPW
DownloadVisualize
BU of 6tpw by Molmil
Crystal structures of FNIII domain one through four of the human leucocyte common antigen-related protein ( LAR)
Descriptor: Receptor-type tyrosine-protein phosphatase F, SULFATE ION
Authors:Vilstrup, J.P, Thirup, S.S, Simonsen, A, Birkefeldt, T, Strandbygaard, D.
Deposit date:2019-12-14
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal and solution structures of fragments of the human leucocyte common antigen-related protein.
Acta Crystallogr D Struct Biol, 76, 2020
7BUT
DownloadVisualize
BU of 7but by Molmil
N-terminal domain (NTD) Solution structure of aciniform spidroin (AcSpN) from Nephila antipodiana.
Descriptor: Aciniform Spidroin
Authors:Fan, J.S, Yang, D.W.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis of Oligomerization of N-Terminal Domain of Spider Aciniform Silk Protein.
Int J Mol Sci, 21, 2020
2WN9
DownloadVisualize
BU of 2wn9 by Molmil
Crystal structure of Aplysia ACHBP in complex with 4-0H-DMXBA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(E)-5,6-DIHYDRO-2,3'-BIPYRIDIN-3(4H)-YLIDENEMETHYL]-3-METHOXYPHENOL, SOLUBLE ACETYLCHOLINE RECEPTOR, ...
Authors:Sulzenbacher, G, Hibbs, R, Shi, J, Talley, T, Conrod, S, Kem, W, Taylor, P, Marchot, P, Bourne, Y.
Deposit date:2009-07-07
Release date:2009-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural determinants for interaction of partial agonists with acetylcholine binding protein and neuronal alpha7 nicotinic acetylcholine receptor.
Embo J., 28, 2009
6TTW
DownloadVisualize
BU of 6ttw by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 4 (ASI_M3M_047)
Descriptor: (2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)-~{N}-piperidin-4-yl-oxolane-2-carboxamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-12-30
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Small-Molecule Inhibitors of METTL3, the Major Human Epitranscriptomic Writer.
Chemmedchem, 15, 2020
4YMG
DownloadVisualize
BU of 4ymg by Molmil
Crystal structure of SAM-bound Podospora anserina methyltransferase PaMTH1
Descriptor: MAGNESIUM ION, PHOSPHATE ION, Putative SAM-dependent O-methyltranferase, ...
Authors:Kudlinzki, D, Linhard, V.L, Chatterjee, D, Saxena, K, Sreeramulu, S, Schwalbe, H.
Deposit date:2015-03-06
Release date:2015-05-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structure and Biophysical Characterization of the S-Adenosylmethionine-dependent O-Methyltransferase PaMTH1, a Putative Enzyme Accumulating during Senescence of Podospora anserina.
J.Biol.Chem., 290, 2015
7B81
DownloadVisualize
BU of 7b81 by Molmil
Crystal structure of Azotobacter vinelandii L-rhamnose 1-dehydrogenase (NAD bound-form)
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Short-chain dehydrogenase/reductase SDR
Authors:Yoshiwara, K, Watanabe, Y, Watanabe, S.
Deposit date:2020-12-12
Release date:2021-02-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:Crystal structure of l-rhamnose 1-dehydrogenase involved in the nonphosphorylative pathway of l-rhamnose metabolism in bacteria.
Febs Lett., 595, 2021
2EGP
DownloadVisualize
BU of 2egp by Molmil
Solution structure of the RING-finger domain from human Tripartite motif protein 34
Descriptor: Tripartite motif-containing protein 34, ZINC ION
Authors:Inoue, K, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-01
Release date:2007-09-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the RING-finger domain from human Tripartite motif protein 34
To be Published
5LZS
DownloadVisualize
BU of 5lzs by Molmil
Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
Descriptor: (2~{S})-~{N}-[(2~{R})-1-[[(3~{S},6~{S},8~{S},12~{S},13~{R},16~{S},17~{R},20~{S},23~{S})-13-[(2~{S})-butan-2-yl]-20-[(4-methoxyphenyl)methyl]-6,17,21-trimethyl-3-(2-methylpropyl)-12-oxidanyl-2,5,7,10,15,19,22-heptakis(oxidanylidene)-8-propan-2-yl-9,18-dioxa-1,4,14,21-tetrazabicyclo[21.3.0]hexacosan-16-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-~{N}-methyl-1-[(2~{S})-2-oxidanylpropanoyl]pyrrolidine-2-carboxamide, 18S ribosomal RNA, 28S ribosomal RNA, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
7XBJ
DownloadVisualize
BU of 7xbj by Molmil
Txp40, an insecticidal toxin protein from Xenorhabdus nematophila
Descriptor: 40kDa insecticidal toxin
Authors:Kinkar, O, Kumar, A, Prashar, A, Hire, R.S, Makde, R.D.
Deposit date:2022-03-21
Release date:2023-03-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The crystal structure of insecticidal protein Txp40 from Xenorhabdus nematophila reveals a two-domain unique binary toxin with homology to the toxin-antitoxin (TA) system.
Insect Biochem.Mol.Biol., 164, 2023
4YRA
DownloadVisualize
BU of 4yra by Molmil
mouse TDH in the apo form
Descriptor: L-threonine 3-dehydrogenase, mitochondrial
Authors:He, C, Li, F.
Deposit date:2015-03-14
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural insights on mouse l-threonine dehydrogenase: A regulatory role of Arg180 in catalysis
J.Struct.Biol., 192, 2015
6TPU
DownloadVisualize
BU of 6tpu by Molmil
Crystal structures of FNIII domain three and four of the human leucocyte common antigen-related protein, LAR
Descriptor: CHLORIDE ION, Receptor-type tyrosine-protein phosphatase F
Authors:Vilstrup, J.P, Thirup, S.S, Simonsen, A, Birkefeldt, T, Strandbygaard, D.
Deposit date:2019-12-14
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal and solution structures of fragments of the human leucocyte common antigen-related protein.
Acta Crystallogr D Struct Biol, 76, 2020
5G6U
DownloadVisualize
BU of 5g6u by Molmil
Crystal structure of langerin carbohydrate recognition domain with GlcNS6S
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Porkolab, V, Chabrol, E, Varga, N, Ordanini, S, Sutkeviciute, I, Thepaut, M, Bernardi, A, Fieschi, F.
Deposit date:2016-07-21
Release date:2018-02-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.844 Å)
Cite:Rational-Differential Design of Highly Specific Glycomimetic Ligands: Targeting DC-SIGN and Excluding Langerin Recognition.
ACS Chem. Biol., 13, 2018
4YWK
DownloadVisualize
BU of 4ywk by Molmil
Pyrococcus furiosus MCM N-terminal domain with Zinc-binding subdomain B deleted
Descriptor: Cell division control protein 21
Authors:Froelich, C.A, Enemark, E.J.
Deposit date:2015-03-20
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:MCM ring hexamerization is a prerequisite for DNA-binding.
Nucleic Acids Res., 43, 2015
5ZOJ
DownloadVisualize
BU of 5zoj by Molmil
Crystal structure of human SMAD2-MAN1 complex
Descriptor: Inner nuclear membrane protein Man1, Mothers against decapentaplegic homolog 2
Authors:Miyazono, K, Ohno, Y, Ito, T, Tanokura, M.
Deposit date:2018-04-13
Release date:2018-10-10
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.794 Å)
Cite:Structural basis for receptor-regulated SMAD recognition by MAN1
Nucleic Acids Res., 46, 2018
6TTT
DownloadVisualize
BU of 6ttt by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 2 (ASI_M3M_140)
Descriptor: (2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-~{N}-methyl-3,4-bis(oxidanyl)oxolane-2-carboxamide, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-12-30
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Small-Molecule Inhibitors of METTL3, the Major Human Epitranscriptomic Writer.
Chemmedchem, 15, 2020
1PVV
DownloadVisualize
BU of 1pvv by Molmil
Refined Structure of Pyrococcus furiosus Ornithine Carbamoyltransferase at 1.87 A
Descriptor: Ornithine carbamoyltransferase, SULFATE ION
Authors:Massant, J, Wouters, J, Glansdorff, N.
Deposit date:2003-06-29
Release date:2003-12-09
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Refined structure of Pyrococcus furiosus ornithine carbamoyltransferase at 1.87 A.
Acta Crystallogr.,Sect.D, 59, 2003
1NP9
DownloadVisualize
BU of 1np9 by Molmil
Structure of the parallel-stranded DNA quadruplex d(TTAGGGA)4 containing the human telomeric repeat
Descriptor: 5'-D(*TP*TP*AP*GP*GP*GP*T)-3'
Authors:Gavathiotis, E, Searle, M.S.
Deposit date:2003-01-17
Release date:2003-09-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the parallel-stranded DNA quadruplex d(TTAGGGT)4 containing the human telomeric repeat: evidence for A-tetrad formation from NMR and molecular dynamics simulations.
ORG.BIOMOL.CHEM., 1, 2003
3PB2
DownloadVisualize
BU of 3pb2 by Molmil
Characterisation of the first monomeric dihydrodipicolinate synthase variant reveals evolutionary insights
Descriptor: Dihydrodipicolinate synthase, GLYCEROL
Authors:Pearce, F.G, Dobson, R.C.J, Jameson, G.B.
Deposit date:2010-10-20
Release date:2011-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of monomeric dihydrodipicolinate synthase variant reveals the importance of substrate binding in optimizing oligomerization.
Biochim.Biophys.Acta, 1814, 2011
3K9P
DownloadVisualize
BU of 3k9p by Molmil
The crystal structure of E2-25K and ubiquitin complex
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Kang, G.B, Ko, S, Song, S.M, Lee, W, Eom, S.H.
Deposit date:2009-10-16
Release date:2010-09-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of E2-25K/UBB+1 interaction leading to proteasome inhibition and neurotoxicity
J.Biol.Chem., 285, 2010

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon