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5NMS
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BU of 5nms by Molmil
Hsp21 dodecamer, structural model based on cryo-EM and homology modelling
Descriptor: 25.3 kDa heat shock protein, chloroplastic
Authors:Rutsdottir, G, Harmark, J, Koeck, P.J.B, Hebert, H, Soderberg, C.A.G, Emanuelsson, C.
Deposit date:2017-04-07
Release date:2017-05-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Structural model of dodecameric heat-shock protein Hsp21: Flexible N-terminal arms interact with client proteins while C-terminal tails maintain the dodecamer and chaperone activity.
J. Biol. Chem., 292, 2017
5N06
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BU of 5n06 by Molmil
Crystal structure of Tie1 Fibronectin-like domain 3
Descriptor: Tyrosine-protein kinase receptor Tie-1
Authors:Leppanen, V.-M, Saharinen, P, Alitalo, K.
Deposit date:2017-02-02
Release date:2017-04-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural basis of Tie2 activation and Tie2/Tie1 heterodimerization.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5N4Q
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BU of 5n4q by Molmil
Human myelin protein P2, mutant T51P
Descriptor: D-MALATE, Myelin P2 protein, PALMITIC ACID, ...
Authors:Ruskamo, S, Kursula, P.
Deposit date:2017-02-11
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Molecular mechanisms of Charcot-Marie-Tooth neuropathy linked to mutations in human myelin protein P2.
Sci Rep, 7, 2017
5N70
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BU of 5n70 by Molmil
CRYSTAL STRUCTURE OF MATURE CATHEPSIN D FROM THE TICK IXODES RICINUS (IRCD1) IN COMPLEX WITH THE N-TERMINAL OCTAPEPTIDE OF THE PROPEPTID
Descriptor: ALA-PHE-ARG-ILE-PRO-LEU-THR-ARG, Putative cathepsin d
Authors:Brynda, J, Hanova, I, Hobizalova, R, Mares, M.
Deposit date:2017-02-17
Release date:2017-12-27
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Novel Structural Mechanism of Allosteric Regulation of Aspartic Peptidases via an Evolutionarily Conserved Exosite.
Cell Chem Biol, 25, 2018
8KFI
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BU of 8kfi by Molmil
Crystal structure of sperm whale myoglobin (F43A/H64I mutant) reconstituted with manganese porphycene
Descriptor: Myoglobin, PORPHYCENE CONTAINING MN, SULFATE ION
Authors:Mizohata, E, Oohora, K, Hayashi, T.
Deposit date:2023-08-15
Release date:2024-08-21
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Rational Design of an Artificial Ethylbenzene Hydroxylase Using Molecular Dynamics Simulation to Enhance the Enantioselectivity
To Be Published
5N7N
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BU of 5n7n by Molmil
CRYSTAL STRUCTURE OF CATHEPSIN D ZYMOGEN FROM THE TICK IXODES RICINUS (IRCD1)
Descriptor: AMMONIUM ION, Putative cathepsin d, SULFATE ION
Authors:Brynda, J, Hanova, I, Hobizalova, R, Mares, M.
Deposit date:2017-02-21
Release date:2017-12-27
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Novel Structural Mechanism of Allosteric Regulation of Aspartic Peptidases via an Evolutionarily Conserved Exosite.
Cell Chem Biol, 25, 2018
5N8L
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BU of 5n8l by Molmil
Structure of TRBP dsRBD 1 and 2 in complex with a 19 bp siRNA (Complex B)
Descriptor: RISC-loading complex subunit TARBP2, RNA (5'-R(*GP*UP*AP*CP*GP*GP*AP*AP*UP*AP*GP*AP*UP*AP*AP*UP*UP*AP*AP*UP*U)-3'), RNA (5'-R(*UP*UP*AP*AP*UP*UP*AP*UP*CP*UP*AP*UP*UP*CP*CP*GP*UP*AP*CP*UP*U)-3')
Authors:Masliah, G, Maris, C, Allain, H.-T.F.
Deposit date:2017-02-23
Release date:2018-02-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of siRNA recognition by TRBP double-stranded RNA binding domains.
EMBO J., 37, 2018
7JUD
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BU of 7jud by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with methyl-mannoside
Descriptor: CALCIUM ION, Macrophage mannose receptor 1, methyl alpha-D-mannopyranoside
Authors:Weis, W.I, Feinberg, H.
Deposit date:2020-08-19
Release date:2021-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
5NA9
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BU of 5na9 by Molmil
The X-ray structure of bovine pancreatic ribonuclease incubated in the presence of an excess of carboplatin (1:10 ratio)
Descriptor: CESIUM ION, CHLORIDE ION, Ribonuclease pancreatic, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2017-02-27
Release date:2017-08-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:A comparison study on RNase A oligomerization induced by cisplatin, carboplatin and oxaliplatin.
J. Inorg. Biochem., 173, 2017
5NCB
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BU of 5ncb by Molmil
Crystal structure of Amycolatopsis cytochrome P450 GcoA in complex with guaiacol.
Descriptor: Cytochrome P450, Guaiacol, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mallinson, S.J.B, Johnson, C.W, Neidle, E.L, Beckham, G.T, McGeehan, J.E.
Deposit date:2017-03-03
Release date:2018-07-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.
Nat Commun, 9, 2018
7JY0
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BU of 7jy0 by Molmil
Structure of HbA with compound 9
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, 2-amino-3-{(1S)-1-[5-fluoro-2-(1H-pyrazol-1-yl)phenyl]ethoxy}quinoline-6-carboxamide, CARBON MONOXIDE, ...
Authors:Jasti, J.
Deposit date:2020-08-28
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:PF-07059013: A Noncovalent Modulator of Hemoglobin for Treatment of Sickle Cell Disease.
J.Med.Chem., 64, 2021
7JUC
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BU of 7juc by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with methyl-mannoside
Descriptor: CALCIUM ION, Macrophage mannose receptor 1, methyl alpha-D-mannopyranoside
Authors:Weis, W.I, Feinberg, H.
Deposit date:2020-08-19
Release date:2021-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
7JY1
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BU of 7jy1 by Molmil
Structure of HbA with compound 19
Descriptor: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, CARBON MONOXIDE, Hemoglobin subunit alpha, ...
Authors:Jasti, J.
Deposit date:2020-08-28
Release date:2021-01-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:PF-07059013: A Noncovalent Modulator of Hemoglobin for Treatment of Sickle Cell Disease.
J.Med.Chem., 64, 2021
5MJL
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BU of 5mjl by Molmil
Single-shot pink beam serial crystallography: Proteinase K
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Meents, A, Oberthuer, D, Lieske, J, Srajer, V.
Deposit date:2016-12-01
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.21013784 Å)
Cite:Pink-beam serial crystallography.
Nat Commun, 8, 2017
7JUG
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BU of 7jug by Molmil
C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with Man-alpha1-6Man
Descriptor: CALCIUM ION, Macrophage mannose receptor 1, alpha-D-mannopyranose
Authors:Weis, W.I, Feinberg, H.
Deposit date:2020-08-19
Release date:2021-02-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of carbohydrate binding by the macrophage mannose receptor CD206.
J.Biol.Chem., 296, 2021
5M9R
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BU of 5m9r by Molmil
Human angiogenin ALS variant F100I
Descriptor: Angiogenin, D(-)-TARTARIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Bradshaw, W.J, Rehman, S, Pham, T.T.K, Thiyagarajan, N, Lee, R.L, Subramanian, V, Acharya, K.R.
Deposit date:2016-11-02
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis.
Sci Rep, 7, 2017
5MB3
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BU of 5mb3 by Molmil
Fragment 333 at a concentration of 50mM in complex with Endothiapepsin
Descriptor: 4-propan-2-ylsulfanyl-1-propyl-6,7-dihydro-5~{H}-cyclopenta[d]pyrimidin-2-one, ACETATE ION, Endothiapepsin, ...
Authors:Radeva, N, Heine, A, Klebe, G.
Deposit date:2016-11-07
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.049 Å)
Cite:Comparison of cocktails versus single soaking experiments
To Be Published
5M9M
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BU of 5m9m by Molmil
Human angiogenin PD variant Q77P
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Angiogenin, ...
Authors:Bradshaw, W.J, Rehman, S, Pham, T.T.K, Thiyagarajan, N, Lee, R.L, Subramanian, V, Acharya, K.R.
Deposit date:2016-11-01
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into human angiogenin variants implicated in Parkinson's disease and Amyotrophic Lateral Sclerosis.
Sci Rep, 7, 2017
8IQ0
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BU of 8iq0 by Molmil
Crystal structure of hydrogen sulfide-bound superoxide dismutase in oxidized state
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
Authors:Zhou, J.H, Huang, W.X, Cheng, R.X, Zhang, P.J, Zhu, Y.C.
Deposit date:2023-03-15
Release date:2023-09-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme.
Cell Rep, 42, 2023
5MKR
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BU of 5mkr by Molmil
HSP72-NBD bound to compound TCI 8 - Tyr15 in up-conformation
Descriptor: 3-[(2~{R},3~{S},4~{R},5~{R})-5-[6-azanyl-8-[(4-chlorophenyl)methylamino]purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]propyl prop-2-enoate, CITRATE ANION, Heat shock 70 kDa protein 1A
Authors:Pettinger, J, Westwood, I.M, Cronin, N, Le Bihan, Y.-V, Van Montfort, R.L.M.
Deposit date:2016-12-05
Release date:2017-03-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:An Irreversible Inhibitor of HSP72 that Unexpectedly Targets Lysine-56.
Angew. Chem. Int. Ed. Engl., 56, 2017
7K20
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BU of 7k20 by Molmil
Cryo-EM structure of pyrene-labeled ADP-actin filaments
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chou, S.Z, Pollard, T.D.
Deposit date:2020-09-08
Release date:2020-11-04
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-electron microscopy structures of pyrene-labeled ADP-P i - and ADP-actin filaments.
Nat Commun, 11, 2020
5MLG
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BU of 5mlg by Molmil
Crystal structure of rat prorenin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin
Authors:Yan, Y, Read, R.
Deposit date:2016-12-06
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of rat prorenin
To Be Published
8IQ1
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BU of 8iq1 by Molmil
Crystal structure of hydrogen sulfide-bound superoxide dismutase in reduced state
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ...
Authors:Zhou, J.H, Huang, W.X, Cheng, R.X, Zhang, P.J, Zhu, Y.C.
Deposit date:2023-03-15
Release date:2023-09-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hydrogen sulfide functions as a micro-modulator bound at the copper active site of Cu/Zn-SOD to regulate the catalytic activity of the enzyme.
Cell Rep, 42, 2023
5MM8
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BU of 5mm8 by Molmil
Atomic resolution structure of SplE protease from Staphylococcus aureus
Descriptor: ACETATE ION, Serine protease SplE
Authors:Stach, N, Zdzalik, M, Dubin, G.
Deposit date:2016-12-08
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Unique Substrate Specificity of SplE Serine Protease from Staphylococcus aureus.
Structure, 26, 2018
5MNA
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BU of 5mna by Molmil
Cationic trypsin in complex with aniline (deuterated sample at 295 K)
Descriptor: ANILINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2017-05-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.441 Å)
Cite:Charges Shift Protonation: Neutron Diffraction Reveals that Aniline and 2-Aminopyridine Become Protonated Upon Binding to Trypsin.
Angew. Chem. Int. Ed. Engl., 56, 2017

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數據於2024-10-16公開中

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