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6PFX
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BU of 6pfx by Molmil
D-alanyl transferase DltD from Enterococcus faecium
Descriptor: D-alanyl transferase DltD, GLYCEROL
Authors:Shakhashiro, M, Korotkov, K.V.
Deposit date:2019-06-22
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:D-alanyl transferase DltD from Enterococcus faecium
To Be Published
6FNH
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BU of 6fnh by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with a pyrazolo[3,4-d]pyrimidine fragment of NVP-BHG712
Descriptor: 1,2-ETHANEDIOL, 1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-amine, Ephrin type-A receptor 2
Authors:Kudlinzki, D, Troester, A, Witt, K, Linhard, V.L, Gande, S.L, Saxena, K, Schwalbe, H.
Deposit date:2018-02-04
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.379 Å)
Cite:NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family.
ChemMedChem, 13, 2018
6UPE
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BU of 6upe by Molmil
Structure of trehalose-6-phosphate phosphatase from Salmonella typhimurium inhibited by 4-n-octylphenyl alpha-D-glucopyranoside-6-sulfate
Descriptor: 4-octylphenyl 6-O-sulfo-alpha-D-glucopyranoside, MAGNESIUM ION, Trehalose-phosphate phosphatase
Authors:Harvey, C.M, O'Toole, K.H, Allen, K.N.
Deposit date:2019-10-17
Release date:2020-08-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.244 Å)
Cite:Structural Analysis of Binding Determinants ofSalmonella typhimuriumTrehalose-6-phosphate Phosphatase Using Ground-State Complexes.
Biochemistry, 59, 2020
6FNK
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BU of 6fnk by Molmil
Crystal Structure of Ephrin B4 (EphB4) Receptor Protein Kinase with a pyrazolo[3,4-d]pyrimidine fragment of NVP-BHG712
Descriptor: 1,2-ETHANEDIOL, 1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-amine, Ephrin type-B receptor 4
Authors:Kudlinzki, D, Troester, A, Witt, K, Linhard, V.L, Saxena, K, Schwalbe, H.
Deposit date:2018-02-04
Release date:2018-08-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.049 Å)
Cite:NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family.
ChemMedChem, 13, 2018
8DG6
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BU of 8dg6 by Molmil
Scaffold Hopping via Ring Opening Enables Identification of Acyclic Compounds as New Complement Factor D Inhibitors
Descriptor: 1-{2-[(2S)-2-{[(3-chloro-2-fluorophenyl)methyl]carbamoyl}pyrrolidin-1-yl]-2-oxoethyl}-1H-indazole-3-carboxamide, Complement factor D
Authors:Raman, K, Babu, Y.S.
Deposit date:2022-06-23
Release date:2022-11-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.986 Å)
Cite:Scaffold hopping via ring opening enables identification of acyclic compounds as new complement Factor D inhibitors.
Bioorg.Med.Chem., 74, 2022
7PMT
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BU of 7pmt by Molmil
Human Cyclophilin D in complex with N-[(5-ethyl-4-oxo-1,2,3,4,5,6- hexahydro-1,5-benzodiazocin-8-yl)methyl]-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
Descriptor: DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase F, mitochondrial, ...
Authors:Silva, D.O, Graedler, U, Bandeiras, T.M.
Deposit date:2021-09-02
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Human Cyclophilin D in complex with N-[(4-aminophenyl)methyl]-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
To Be Published
6X9B
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BU of 6x9b by Molmil
Structure of proline utilization A with cis-4-hydroxy-D-proline bound in the L-glutamate-gamma-semialdehyde dehydrogenase active site
Descriptor: (4R)-4-hydroxy-D-proline, Bifunctional protein PutA, DI(HYDROXYETHYL)ETHER, ...
Authors:Tanner, J.J, Campbell, A.C.
Deposit date:2020-06-02
Release date:2020-12-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural analysis of prolines and hydroxyprolines binding to the l-glutamate-gamma-semialdehyde dehydrogenase active site of bifunctional proline utilization A.
Arch.Biochem.Biophys., 698, 2020
8PXM
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BU of 8pxm by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH (1R,1'R)-7,7'-(pentane-1,5-diylbis(oxy))bis(1,3-dimethyl-1,3-dihydro-2H-benzo[d]azepin-2-one)
Descriptor: (1R)-7-[5-[[(1R)-1,3-dimethyl-2-oxidanylidene-1H-3-benzazepin-7-yl]oxy]pentoxy]-1,3-dimethyl-1H-3-benzazepin-2-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Chung, C.W.
Deposit date:2023-07-23
Release date:2023-10-04
Method:X-RAY DIFFRACTION (2.378 Å)
Cite:Design and Characterization of 1,3-Dihydro-2 H -benzo[ d ]azepin-2-ones as Rule-of-5 Compliant Bivalent BET Inhibitors.
Acs Med.Chem.Lett., 14, 2023
4X9U
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BU of 4x9u by Molmil
Crystal structure of the kiwifruit allergen Act d 5
Descriptor: Kiwellin
Authors:Offermann, L.R, Perdue, M.L, Giangrieco, I, Tamburrini, M, Ciardiello, M.A, Chruszcz, M.
Deposit date:2014-12-11
Release date:2015-07-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Elusive Structural, Functional, and Immunological Features of Act d 5, the Green Kiwifruit Kiwellin.
J.Agric.Food Chem., 63, 2015
7A1E
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BU of 7a1e by Molmil
LppS with covalent adduct derived from 1c
Descriptor: ACETATE ION, L,D-transpeptidase 2, phenylmethanethiol
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-12
Release date:2021-04-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
7A10
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BU of 7a10 by Molmil
LppS with covalent adduct derived from 1g
Descriptor: 4-methoxycyclohexa-2,5-diene-1-thione, L,D-transpeptidase 2
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-11
Release date:2021-04-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
7A11
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BU of 7a11 by Molmil
LppS with covalent adduct derived from 1E
Descriptor: ACETATE ION, L,D-transpeptidase 2, propane-1-thiol
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-11
Release date:2021-04-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
7A0Z
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BU of 7a0z by Molmil
LppS with covalent adduct derived from 1b
Descriptor: L,D-transpeptidase 2, TRIS(HYDROXYETHYL)AMINOMETHANE, benzenethiol
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-11
Release date:2021-04-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
7A1C
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BU of 7a1c by Molmil
LdtMT2 with covalent adduct derived from N-Thio-beta-lactam 1a
Descriptor: DIMETHYL SULFOXIDE, L,D-transpeptidase 2
Authors:Schnell, R, Steiner, E.M.
Deposit date:2020-08-12
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:N-Thio-beta-lactams targeting L,D-transpeptidase-2, with activity against drug-resistant strains of Mycobacterium tuberculosis.
Cell Chem Biol, 28, 2021
7AEN
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BU of 7aen by Molmil
Galectin-8 N-terminal carbohydrate recognition domain in complex with methyl 3-O-((7-carboxy)quinolin-2-yl)-methoxy)-beta-D-galactopyranoside
Descriptor: CHLORIDE ION, GLYCEROL, Isoform 2 of Galectin-8, ...
Authors:Hassan, M, Klavern, V.S, Hakansson, M, Anderluh, M, Tomasic, T, Jakopin, Z, Nilsson, J.U, Kovacic, R, Walse, B, Diehl, C.
Deposit date:2020-09-17
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Guided Design of d-Galactal Derivatives with High Affinity and Selectivity for the Galectin-8 N-Terminal Domain
Acs Med.Chem.Lett., 12, 2021
7Q3S
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BU of 7q3s by Molmil
Crystal structure of UGT706F8 from Zea mays
Descriptor: Glycosyltransferase, URIDINE-5'-DIPHOSPHATE
Authors:Fredslund, F, Bidart, G.N, Welner, D.H.
Deposit date:2021-10-28
Release date:2022-05-04
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Family 1 Glycosyltransferase UGT706F8 from Zea mays Selectively Catalyzes the Synthesis of Silibinin 7- O -beta-d-Glucoside.
Acs Sustain Chem Eng, 10, 2022
6NNC
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BU of 6nnc by Molmil
Structure of Dihydrofolate reductase from Mycobacterium tuberculosis in complex with NADPH and pemetrexed
Descriptor: 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Chavez-Pacheco, S.M, Dias, M.V.B.
Deposit date:2019-01-14
Release date:2019-07-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the closed form of Mycobacterium tuberculosis dihydrofolate reductase in complex with dihydrofolate and antifolates.
Acta Crystallogr D Struct Biol, 75, 2019
8H4E
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BU of 8h4e by Molmil
Blasnase-T13A/P55N with D-asn
Descriptor: D-ASPARAGINE, FORMIC ACID, L-asparaginase, ...
Authors:Lu, F, Wang, W, Chi, H, Ran, T.
Deposit date:2022-10-10
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure-based rational design of Bacillus licheniformis L-asparaginase with low/no D-asparaginase activity for a safer enzyme
To Be Published
1B3P
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BU of 1b3p by Molmil
5'-D(*GP*GP*AP*GP*GP*AP*T)-3'
Descriptor: DNA (5'-D(*GP*GP*AP*GP*GP*AP*T)-3')
Authors:Kettani, A, Bouaziz, S, Skripkin, E, Majumdar, A, Wang, W, Jones, R.A, Patel, D.J.
Deposit date:1998-12-14
Release date:1999-08-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Interlocked mismatch-aligned arrowhead DNA motifs.
Structure Fold.Des., 7, 1999
8H4F
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BU of 8h4f by Molmil
Blasnase-T13A/P55F with D-asn
Descriptor: D-ASPARAGINE, FORMIC ACID, L-asparaginase, ...
Authors:Lu, F, Wang, W, Chi, H, Ran, T.
Deposit date:2022-10-10
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based rational design of Bacillus licheniformis L-asparaginase with low/no D-asparaginase activity for a safer enzyme
To Be Published
6Y6F
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BU of 6y6f by Molmil
Crystal structure of STK17B (DRAK2) in complex with PKIS43
Descriptor: 1,2-ETHANEDIOL, 2-[6-(4-methylsulfanylphenyl)thieno[3,2-d]pyrimidin-4-yl]sulfanylethanoic acid, Serine/threonine-protein kinase 17B
Authors:Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Drewry, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-02-26
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.
J.Med.Chem., 63, 2020
6Y6H
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BU of 6y6h by Molmil
Crystal structure of STK17b (DRAK2) in complex with UNC-AP-194 probe
Descriptor: 1,2-ETHANEDIOL, 2-[6-(1-benzothiophen-2-yl)thieno[3,2-d]pyrimidin-4-yl]sulfanylethanoic acid, Serine/threonine-protein kinase 17B
Authors:Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Drewry, D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-02-26
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.
J.Med.Chem., 63, 2020
6X9A
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BU of 6x9a by Molmil
Structure of proline utilization A with trans-4-hydroxy-D-proline bound in the L-glutamate-gamma-semialdehyde dehydrogenase active site
Descriptor: (4S)-4-hydroxy-D-proline, Bifunctional protein PutA, DI(HYDROXYETHYL)ETHER, ...
Authors:Tanner, J.J, Campbell, A.C.
Deposit date:2020-06-02
Release date:2020-12-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural analysis of prolines and hydroxyprolines binding to the l-glutamate-gamma-semialdehyde dehydrogenase active site of bifunctional proline utilization A.
Arch.Biochem.Biophys., 698, 2020
6NZ2
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BU of 6nz2 by Molmil
NMR solution structure of Bcd1p120-303 from Saccharomyces cerevisiae
Descriptor: Box C/D snoRNA protein 1
Authors:Bragantini, B, Quinternet, M, Charpentier, B, Manival, X.
Deposit date:2019-02-12
Release date:2020-08-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The box C/D snoRNP assembly factor Bcd1 interacts with the histone chaperone Rtt106 and controls its transcription dependent activity.
Nat Commun, 12, 2021
3FVE
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BU of 3fve by Molmil
Crystal structure of diaminopimelate epimerase Mycobacterium tuberculosis DapF
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Diaminopimelate epimerase, GLYCEROL
Authors:Usha, V, Dover, L.G, Roper, D.I, Futterer, K, Besra, G.S.
Deposit date:2009-01-15
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the diaminopimelate epimerase DapF from Mycobacterium tuberculosis
Acta Crystallogr.,Sect.D, 65, 2009

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數據於2025-07-09公開中

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