PDB: 19326 resultsInfo pagesStatus searchChemie searchBIRD

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4E8G	Crystal structure of an enolase (mandelate racemase subgroup) from paracococus denitrificans pd1222 (target nysgrc-012907) with bound mg Descriptor: MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein, ... Authors: Vetting, M.W, Toro, R, Bhosle, R, Wasserman, S.R, Morisco, L.L, Sojitra, S, Chamala, S, Kar, A, Lafleur, J, Villigas, G, Evans, B, Hammonds, J, Gizzi, A, Zencheck, W.D, Hillerich, B, Love, J, Seidel, R.D, Bonanno, J.B, Gerlt, J.A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2012-03-20 Release date: 2012-05-02 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2 Å) Cite: Prediction and biochemical demonstration of a catabolic pathway for the osmoprotectant proline betaine. MBio, 5, 2014
2ZS1	Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin Descriptor: CHLORIDE ION, Extracellular giant hemoglobin major globin subunit A1, Extracellular giant hemoglobin major globin subunit A2, ... Authors: Numoto, N, Nakagawa, T, Kita, A, Sasayama, Y, Fukumori, Y, Miki, K. Deposit date: 2008-09-02 Release date: 2008-10-21 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural Basis for the Heterotropic and Homotropic Interactions of Invertebrate Giant Hemoglobin Biochemistry, 47, 2008
2ZSP	Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [300 min] Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S. Deposit date: 2008-09-17 Release date: 2009-02-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin Proc.Natl.Acad.Sci.USA, 106, 2009
4ECF	Crystal structure of an ABC-type phosphate transport system, periplasmic component (LVIS_0633) from Lactobacillus brevis ATCC 367 at 1.55 A resolution Descriptor: 1,2-ETHANEDIOL, ABC-type phosphate transport system, periplasmic component, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2012-03-26 Release date: 2012-04-11 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of an ABC-type phosphate transport system, periplasmic component (LVIS_0633) from Lactobacillus brevis ATCC 367 at 1.55 A resolution To be published
4EJE	Structure Of The Tsg101 UEV Domain In Complex With an Ebola PTAP late Domain Peptide Descriptor: Matrix protein VP40, SULFATE ION, Tumor susceptibility gene 101 protein Authors: Camara-Artigas, A. Deposit date: 2012-04-06 Release date: 2013-04-10 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: To be published To be Published
4EH9	Human p38 MAP kinase in complex with NP-F11 and RL87 Descriptor: (1R,5S)-3-[4-(trifluoromethyl)benzoyl]-1,2,3,4,5,6-hexahydro-8H-1,5-methanopyrido[1,2-a][1,5]diazocin-8-one, Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine Authors: Over, B, Gruetter, C, Waldmann, H, Rauh, D. Deposit date: 2012-04-02 Release date: 2012-12-05 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Natural-product-derived fragments for fragment-based ligand discovery. Nat Chem, 5, 2012
4ENB	Crystal structure of fluoride riboswitch, bound to Iridium Descriptor: FLUORIDE ION, Fluoride riboswitch, IRIDIUM HEXAMMINE ION, ... Authors: Ren, A.M, Rajashankar, K.R, Patel, D.J. Deposit date: 2012-04-12 Release date: 2012-05-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.302 Å) Cite: Fluoride ion encapsulation by Mg2+ ions and phosphates in a fluoride riboswitch. Nature, 486, 2012
4HFS	Crystal structure of an uncharacterized protein (yncM) from Bacillus subtilis subsp. subtilis str. 168 at 1.55 A resolution Descriptor: SULFATE ION, Uncharacterized protein YncM Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2012-10-05 Release date: 2012-12-05 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of an uncharacterized protein (yncM) from Bacillus subtilis subsp. subtilis str. 168 at 1.55 A resolution To be Published
4H1X	Crystal structure of a phosphate ABC transporter, phosphate-binding protein (SP_2084) from Streptococcus pneumoniae TIGR4 at 1.77 A resolution Descriptor: CHLORIDE ION, CITRIC ACID, Phosphate-binding protein pstS 2 Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2012-09-11 Release date: 2012-10-17 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Crystal structure of a phosphate ABC transporter, phosphate-binding protein (SP_2084) from Streptococcus pneumoniae TIGR4 at 1.77 A resolution To be published
4H5I	Crystal Structure of the Guanine Nucleotide Exchange Factor Sec12 (P1 form) Descriptor: Guanine nucleotide-exchange factor SEC12, POTASSIUM ION Authors: McMahon, C, Jeffrey, P.D, Hughson, F.M. Deposit date: 2012-09-18 Release date: 2012-11-07 Last modified: 2013-01-09 Method: X-RAY DIFFRACTION (1.36 Å) Cite: The structure of sec12 implicates potassium ion coordination in sar1 activation. J.Biol.Chem., 287, 2012
4H3Q	Crystal structure of human ERK2 complexed with a MAPK docking peptide Descriptor: Dual specificity mitogen-activated protein kinase kinase 2, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Authors: Gogl, G, Toeroe, I, Remenyi, A. Deposit date: 2012-09-14 Release date: 2013-02-27 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Protein-peptide complex crystallization: a case study on the ERK2 mitogen-activated protein kinase Acta Crystallogr.,Sect.D, 69, 2013
4GRX	Structure of an omega-aminotransferase from Paracoccus denitrificans Descriptor: Aminotransferase, DELTA-AMINO VALERIC ACID, SODIUM ION Authors: Rausch, C, Lerchner, A, Schiefner, A, Skerra, A. Deposit date: 2012-08-27 Release date: 2012-12-19 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of the omega-aminotransferase from Paracoccus denitrificans and its phylogenetic relationship with other class III aminotransferases that have biotechnological potential. Proteins, 81, 2013
4GT3	ATP-bound form of the ERK2 kinase Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Pozharski, E, Zhang, J, Shapiro, P. Deposit date: 2012-08-28 Release date: 2012-09-12 Method: X-RAY DIFFRACTION (1.68 Å) Cite: ATP-bound form of the ERK2 kinase TO BE PUBLISHED
4GU4	Crystal structure of the T1L reovirus attachment protein sigma1 in complex with alpha-2,3-sialyllactose Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, Outer capsid protein sigma-1 Authors: Reiss, K, Stehle, T. Deposit date: 2012-08-29 Release date: 2012-12-05 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.5 Å) Cite: The GM2 Glycan Serves as a Functional Coreceptor for Serotype 1 Reovirus. Plos Pathog., 8, 2012
4GZV	Crystal structure of a lipocalin family protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution Descriptor: ACETATE ION, GLYCEROL, SODIUM ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2012-09-06 Release date: 2012-11-07 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of a hypothetical protein (BACOVA_00364) from Bacteroides ovatus ATCC 8483 at 1.95 A resolution To be published
2ZG1	Crystal Structure of Two N-terminal Domains of Siglec-5 in Complex with 6'-Sialyllactose Descriptor: N-acetyl-alpha-neuraminic acid, Sialic acid-binding Ig-like lectin 5 Authors: Zhuravleva, M.A, Sun, P.D. Deposit date: 2008-01-17 Release date: 2008-02-05 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural implications of Siglec-5-mediated sialoglycan recognition J.Mol.Biol., 375, 2008
4H17	Crystal structure of an isochorismatase (PP1826) from Pseudomonas putida KT2440 at 1.60 A resolution Descriptor: 1,2-ETHANEDIOL, Hydrolase, isochorismatase family, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2012-09-10 Release date: 2012-11-14 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of an isochorismatase (PP1826) from Pseudomonas putida KT2440 at 1.60 A resolution To be published
4H3I	Structure of BACE Bound to 3-(5-((7aR)-2-imino-6-(3-methoxypyridin-2-yl)-3-methyl-4-oxooctahydro-1H-pyrrolo[3,4-d]pyrimidin-7a-yl)thiophen-3-yl)benzonitrile Descriptor: 3-{5-[(2E,4aR,7aR)-2-imino-6-(3-methoxypyridin-2-yl)-3-methyl-4-oxooctahydro-7aH-pyrrolo[3,4-d]pyrimidin-7a-yl]thiophen-3-yl}benzonitrile, Beta-secretase 1, L(+)-TARTARIC ACID Authors: Strickland, C, Mandal, M. Deposit date: 2012-09-13 Release date: 2012-11-07 Last modified: 2012-11-21 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Design and Validation of Bicyclic Iminopyrimidinones As Beta Amyloid Cleaving Enzyme-1 (BACE1) Inhibitors: Conformational Constraint to Favor a Bioactive Conformation. J.Med.Chem., 55, 2012
4G57	Staphylococcal Nuclease double mutant I72L, I92L Descriptor: Thermonuclease Authors: Sakon, J, Stites, W.E, Gill, E, Latimer, E, Rosser, J. Deposit date: 2012-07-17 Release date: 2012-08-29 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.81 Å) Cite:
2ZSQ	Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [150 min] Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S. Deposit date: 2008-09-17 Release date: 2009-02-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin. Proc.Natl.Acad.Sci.USA, 106, 2009
2ZSZ	Carbonmonoxy Sperm Whale Myoglobin at 100 K: Laser on [600 min] Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S. Deposit date: 2008-09-18 Release date: 2009-02-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin Proc.Natl.Acad.Sci.USA, 106, 2009
2ZSS	Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser on [300 min] Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S. Deposit date: 2008-09-17 Release date: 2009-02-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin. Proc.Natl.Acad.Sci.USA, 106, 2009
2ZT3	Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [750 min] Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S. Deposit date: 2008-09-18 Release date: 2009-02-24 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin Proc.Natl.Acad.Sci.USA, 106, 2009
2ZTS	Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3 Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative uncharacterized protein PH0186 Authors: Ming, H, Miyazono, K, Tanokura, M. Deposit date: 2008-10-08 Release date: 2009-03-24 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2.07 Å) Cite: Crystal structure of KaiC-like protein PH0186 from hyperthermophilic archaea Pyrococcus horikoshii OT3 Proteins, 75, 2009
2ZVN	NEMO CoZi domain incomplex with diubiquitin in P212121 space group Descriptor: NF-kappa-B essential modulator, UBC protein Authors: Rahighi, S, Ikeda, F, Kawasaki, M, Akutsu, M, Suzuki, N, Kato, R, Kensche, T, Uejima, T, Bloor, S, Komander, D, Randow, F, Wakatsuki, S, Dikic, I. Deposit date: 2008-11-12 Release date: 2009-03-24 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation Cell(Cambridge,Mass.), 136, 2009

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