PDB: 105044 resultsInfo pagesStatus searchChemie searchBIRD

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8IPR	Cryo-EM structure of heme transporter CydDC from Mycobacterium smegmatis in the outward facing ATP bound state Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC, MAGNESIUM ION, ... Authors: Zhu, C, Li, J. Deposit date: 2023-03-14 Release date: 2023-06-14 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM structures of a prokaryotic heme transporter CydDC. Protein Cell, 14, 2023
8IPS	Cryo-EM structure of heme transporter CydDC from Escherichia coli in the inward facing heme loading state Descriptor: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC, ... Authors: Zhu, C, Li, J. Deposit date: 2023-03-14 Release date: 2023-06-14 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM structures of a prokaryotic heme transporter CydDC. Protein Cell, 14, 2023
8IPQ	Cryo-EM structure of heme transporter CydDC from Mycobacterium smegmatis in the inward facing apo state Descriptor: Component linked with the assembly of cytochrome' ABC transporter ATP-binding protein CydC, Transmembrane ATP-binding protein ABC transporter cydD Authors: Zhu, C, Li, J. Deposit date: 2023-03-14 Release date: 2023-06-14 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Cryo-EM structures of a prokaryotic heme transporter CydDC. Protein Cell, 14, 2023
1O0F	RNASE A in complex with 3',5'-ADP Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Ribonuclease pancreatic Authors: Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M. Deposit date: 2003-02-21 Release date: 2003-12-09 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.5 Å) Cite: High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors PROTEIN SCI., 12, 2003
1O0M	Ribonuclease A in complex with uridine-2'-phosphate Descriptor: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, Ribonuclease pancreatic Authors: Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M. Deposit date: 2003-02-24 Release date: 2003-12-09 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors PROTEIN SCI., 12, 2003
8FO3	Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with (E)-3-nitro-4-(2-(2-phenylpropylidene)hydrazineyl)benzenesulfonamide Descriptor: 3-nitro-4-{2-[(2S)-2-phenylpropyl]hydrazinyl}benzene-1-sulfonamide, H9 immunoglobulin light chain, PHOSPHATE ION Authors: Yan, N.L, Wilson, I.A, Kelly, J.W. Deposit date: 2022-12-29 Release date: 2023-05-24 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal Structures of Diaryl Hydrazone and Sulfone Stabilizers in Complex with an Amyloidogenic Light Chain Reveal an Alternate Ligand-Binding Cavity Isr.J.Chem., 2023
8FO4	Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 6-methyl-2-(2-((1E,2E)-3-(2-nitrophenyl)allylidene)hydrazineyl)pyrimidin-4-ol Descriptor: 6-methyl-2-{2-[(1E)-3-(2-nitrophenyl)prop-1-en-1-yl]hydrazinyl}pyrimidin-4(5H)-one, H9 immunoglobulin light chain, PHOSPHATE ION Authors: Yan, N.L, Wilson, I.A, Kelly, J.W. Deposit date: 2022-12-29 Release date: 2023-05-24 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal Structures of Diaryl Hydrazone and Sulfone Stabilizers in Complex with an Amyloidogenic Light Chain Reveal an Alternate Ligand-Binding Cavity Isr.J.Chem., 2023
8ERZ	Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Aib10Gly11 turn Descriptor: Designed miniprotein oPPalpha: Aib10Gly11 turn Authors: Harmon, T.W, Horne, W.S. Deposit date: 2022-10-13 Release date: 2023-04-05 Last modified: 2023-06-28 Method: SOLUTION NMR Cite: Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability. Chembiochem, 24, 2023
8ERY	Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Asp10Asn11 turn Descriptor: Designed miniprotein oPPalpha: Asp10Asn11 turn Authors: Harmon, T.W, Horne, W.S. Deposit date: 2022-10-13 Release date: 2023-04-05 Last modified: 2024-10-16 Method: SOLUTION NMR Cite: Protein Backbone Alteration in Non-hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability. Chembiochem, 2023
2WZN	3d structure of TET3 from Pyrococcus horikoshii Descriptor: 354AA LONG HYPOTHETICAL OPERON PROTEIN FRV, CHLORIDE ION, GLYCEROL, ... Authors: Rosenbaum, E, Dura, M.A, Vellieux, F.M, Franzetti, B. Deposit date: 2009-12-01 Release date: 2010-11-03 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The Structural and Biochemical Characterizations of a Novel Tet Peptidase Complex from Pyrococcus Horikoshii Reveal an Integrated Peptide Degradation System in Hyperthermophilic Archaea. Mol.Microbiol., 72, 2009
8ES2	Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: Aib10Asn11 turn Descriptor: Designed miniprotein oPPalpha: Aib10Asn11 turn Authors: Harmon, T.W, Horne, W.S. Deposit date: 2022-10-13 Release date: 2023-04-05 Last modified: 2023-06-28 Method: SOLUTION NMR Cite: Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability. Chembiochem, 24, 2023
8ES1	Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: deltaOrn10-11 turn Descriptor: Designed miniprotein oPPalpha: deltaOrn10-11 turn Authors: Harmon, T.W, Horne, W.S. Deposit date: 2022-10-13 Release date: 2023-04-05 Last modified: 2023-06-28 Method: SOLUTION NMR Cite: Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability. Chembiochem, 24, 2023
8ES3	Backbone modifications in the inter-helix loop of designed miniprotein oPPalpha: DPro10Pro11 turn Descriptor: Designed miniprotein oPPalpha: DPro10Pro11 turn Authors: Harmon, T.W, Horne, W.S. Deposit date: 2022-10-13 Release date: 2023-04-05 Last modified: 2024-10-30 Method: SOLUTION NMR Cite: Protein Backbone Alteration in Non-Hairpin beta-Turns: Impacts on Tertiary Folded Structure and Folded Stability. Chembiochem, 24, 2023
6YK8	OTU-like deubiquitinase from Legionella -Lpg2529 Descriptor: PLATINUM (II) ION, Uncharacterized protein Authors: Shin, D, Dikic, I. Deposit date: 2020-04-05 Release date: 2021-02-10 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.42 Å) Cite: Bacterial OTU deubiquitinases regulate substrate ubiquitination upon Legionella infection. Elife, 9, 2020
2WYR	3-D structure of PhTET1-12s, dodecamer in the asymmetric unit Descriptor: COBALT (II) ION, COBALT-ACTIVATED PEPTIDASE TET1 Authors: Vellieux, F.M.D, Dura, M.A, Franzetti, B. Deposit date: 2009-11-20 Release date: 2010-12-01 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.245 Å) Cite: Structure of Phtet1-12S, Dodecamer in the Asymmetric Unit To be Published
8FO5	Structure of full-length amyloidogenic immunoglobulin light chain H9 in complex with 1-(1-(phenylsulfonyl)-1H-pyrrol-3-yl)ethan-1-one Descriptor: 1-[1-(benzenesulfonyl)-1H-pyrrol-3-yl]ethan-1-one, H9 immunoglobulin light chain, PHOSPHATE ION Authors: Yan, N.L, Wilson, I.A, Kelly, J.W. Deposit date: 2022-12-29 Release date: 2023-05-24 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.89 Å) Cite: Crystal Structures of Diaryl Hydrazone and Sulfone Stabilizers in Complex with an Amyloidogenic Light Chain Reveal an Alternate Ligand-Binding Cavity Isr.J.Chem., 2023
4YJS	THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000226 Descriptor: 3-[{2-[(1,1-dioxido-2,3-dihydro-1,2-benzothiazol-6-yl)amino]pyrimidin-4-yl}(1H-indazol-4-yl)amino]propan-1-ol, Tyrosine-protein kinase SYK Authors: Somers, D.O. Deposit date: 2015-03-03 Release date: 2015-09-30 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Discovery of GSK143, a highly potent, selective and orally efficacious spleen tyrosine kinase inhibitor. Bioorg. Med. Chem. Lett., 21, 2011
8F5J	human branched chain ketoacid dehydrogenase kinase in complex with inhibitors Descriptor: 3-chloro-5-fluorothieno[3,2-b]thiophene-2-carboxylic acid, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Liu, S, Roth Flach, R, Bollinger, E, Filipski, K. Deposit date: 2022-11-14 Release date: 2023-07-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.545 Å) Cite: Small molecule branched-chain ketoacid dehydrogenase kinase (BDK) inhibitors with opposing effects on BDK protein levels. Nat Commun, 14, 2023
8F5F	human branched chain ketoacid dehydrogenase kinase in complex with inhibitors Descriptor: (2P)-2-[(4P)-4-{6-[(1-ethylcyclopropyl)methoxy]pyridin-3-yl}-1,3-thiazol-2-yl]benzoic acid, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Liu, S, Roth Flach, R, Bollinger, E, Filipski, K. Deposit date: 2022-11-14 Release date: 2023-07-05 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.149 Å) Cite: Small molecule branched-chain ketoacid dehydrogenase kinase (BDK) inhibitors with opposing effects on BDK protein levels. Nat Commun, 14, 2023
8F5S	human branched chain ketoacid dehydrogenase kinase in complex with inhibitors Descriptor: (2M)-2-[2-(4-methylphenyl)-1,3-thiazol-4-yl]benzoic acid, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Liu, S, Roth Flach, R, Bollinger, E, Filipski, K. Deposit date: 2022-11-15 Release date: 2023-07-05 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.793 Å) Cite: Small molecule branched-chain ketoacid dehydrogenase kinase (BDK) inhibitors with opposing effects on BDK protein levels. Nat Commun, 14, 2023
4YX7	Complex of SpaO(SPOA1,2) and OrgB(APAR)::T4lysozyme fusion protein Descriptor: Oxygen-regulated invasion protein OrgB,Endolysin, Surface presentation of antigens protein SpaO Authors: Notti, R.Q, Stebbins, C.E. Deposit date: 2015-03-22 Release date: 2015-06-03 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.0007 Å) Cite: A common assembly module in injectisome and flagellar type III secretion sorting platforms. Nat Commun, 6, 2015
4YJO	THE KINASE DOMAIN OF HUMAN SPLEEN TYROSINE (SYK) IN COMPLEX WITH GTC000222 Descriptor: 5-chloro-N~2~-(1,1-dioxido-2,3-dihydro-1,2-benzothiazol-6-yl)-N~4~-ethyl-N~4~-(1H-indazol-4-yl)pyrimidine-2,4-diamine, GLYCEROL, Tyrosine-protein kinase SYK Authors: Somers, D.O, Neu, M. Deposit date: 2015-03-03 Release date: 2015-09-30 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Discovery of GSK143, a highly potent, selective and orally efficacious spleen tyrosine kinase inhibitor. Bioorg. Med. Chem. Lett., 21, 2011
4YX1	SpaO(SPOA2) Descriptor: CALCIUM ION, Surface presentation of antigens protein SpaO Authors: Notti, R.Q, Stebbins, C.E. Deposit date: 2015-03-21 Release date: 2015-06-03 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.35 Å) Cite: A common assembly module in injectisome and flagellar type III secretion sorting platforms. Nat Commun, 6, 2015
4YXB	FliM(SPOA)::FliN fusion protein Descriptor: Ambiguous peptide density, Flagellar motor switch protein FliM,Flagellar motor switch protein FliN, FliM::FliN fragment, ... Authors: Notti, R.Q, Stebbins, C.E. Deposit date: 2015-03-22 Release date: 2015-06-03 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.56 Å) Cite: A common assembly module in injectisome and flagellar type III secretion sorting platforms. Nat Commun, 6, 2015
3RQW	Crystal structure of acetylcholine bound to a prokaryotic pentameric ligand-gated ion channel, ELIC Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETYLCHOLINE, ELIC Pentameric Ligand Gated Ion Channel from Erwinia Chrysanthemi, ... Authors: Pan, J.J, Chen, Q, Yoshida, K, Cohen, A, Kong, X.P, Xu, Y, Tang, P. Deposit date: 2011-04-28 Release date: 2012-03-07 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.913 Å) Cite: Structure of the pentameric ligand-gated ion channel ELIC cocrystallized with its competitive antagonist acetylcholine. Nat Commun, 3, 2012

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