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3CCR
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BU of 3ccr by Molmil
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Blaha, G, Gurel, G.
Deposit date:2008-02-26
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
J.Mol.Biol., 379, 2008
3CCJ
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BU of 3ccj by Molmil
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Blaha, G, Gurel, G.
Deposit date:2008-02-26
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
J.Mol.Biol., 379, 2008
7NT6
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BU of 7nt6 by Molmil
CryoEM structure of the Nipah virus nucleocapsid spiral clam-shaped assembly
Descriptor: Nucleoprotein, RNA (42-MER), RNA (48-MER)
Authors:Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
Deposit date:2021-03-09
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
6QP0
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BU of 6qp0 by Molmil
Crystal structure of Chaetomium thermophilum Kti12 in complex with ADP-AlF3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ...
Authors:Krutyholowa, R, Glatt, S.
Deposit date:2019-02-13
Release date:2019-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.409 Å)
Cite:Kti12, a PSTK-like tRNA dependent ATPase essential for tRNA modification by Elongator.
Nucleic Acids Res., 47, 2019
4KG3
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BU of 4kg3 by Molmil
Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain in complex with Mg (E153Q mutation)
Descriptor: MAGNESIUM ION, mRNA-decapping enzyme subunit 2
Authors:Aglietti, R.A, Floor, S.N, Gross, J.D.
Deposit date:2013-04-28
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Active site conformational dynamics are coupled to catalysis in the mRNA decapping enzyme dcp2.
Structure, 21, 2013
4X2O
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BU of 4x2o by Molmil
Sac3N peptide bound to Mex67:Mtr2
Descriptor: Putative SAC3 family protein, Putative mRNA export protein, Putative uncharacterized protein
Authors:Aibara, S, Valkov, E, Stewart, M.
Deposit date:2014-11-26
Release date:2015-06-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Characterization of the Chaetomium thermophilum TREX-2 Complex and its Interaction with the mRNA Nuclear Export Factor Mex67:Mtr2.
Structure, 23, 2015
2BLN
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BU of 2bln by Molmil
N-terminal formyltransferase domain of ArnA in complex with N-5- formyltetrahydrofolate and UMP
Descriptor: ACETATE ION, N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid, PROTEIN YFBG, ...
Authors:Williams, G.J, Breazeale, S.D, Raetz, C.R.H, Naismith, J.H.
Deposit date:2005-03-07
Release date:2005-04-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure and Function of Both Domains of Arna, a Dual Function Decarboxylase and a Formyltransferase, Involved in 4-Amino-4-Deoxy-L-Arabinose Biosynthesis.
J.Biol.Chem., 280, 2005
2DKF
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BU of 2dkf by Molmil
Crystal Structure of TTHA0252 from Thermus thermophilus HB8, a RNA Degradation Protein of the Metallo-beta-lactamase Superfamily
Descriptor: ZINC ION, metallo-beta-lactamase superfamily protein
Authors:Ishikawa, I, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-10
Release date:2006-12-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of TTHA0252 from Thermus thermophilus HB8, a RNA degradation protein of the metallo-beta-lactamase superfamily
J.Biochem.(Tokyo), 140, 2006
5MGA
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BU of 5mga by Molmil
Structure of the Cpf1 endonuclease R-loop complex after DNA cleavage
Descriptor: CRISPR-associated endonuclease Cpf1, DNA (26-MER), DNA (5'-D(P*CP*GP*TP*TP*AP*GP*AP*GP*AP*AP*GP*T)-3'), ...
Authors:Montoya, G, Stella, S.
Deposit date:2016-11-21
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Cpf1 endonuclease R-loop complex after target DNA cleavage.
Nature, 546, 2017
7PLA
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BU of 7pla by Molmil
Cryo-EM structure of ShCas12k in complex with a sgRNA and a dsDNA target
Descriptor: DNA non-target strand, DNA target strand, ShCas12k, ...
Authors:Schmitz, M, Jinek, M.
Deposit date:2021-08-30
Release date:2021-12-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Target site selection and remodelling by type V CRISPR-transposon systems.
Nature, 599, 2021
8CGL
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BU of 8cgl by Molmil
Cryo-EM structure of RNase J from Helicobacter pylori
Descriptor: Ribonuclease J
Authors:Lulla, A, Luisi, B.F.
Deposit date:2023-02-05
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Acetylation regulates the oligomerization state and activity of RNase J, the Helicobacter pylori major ribonuclease.
Nat Commun, 14, 2023
5CXT
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BU of 5cxt by Molmil
Crystal structure of a RNA-binding protein 39 (RBM39) in complex with fragment of splicing factor (U2AF) from Unknown at 2.20 A resolution
Descriptor: RNA-binding protein 39, Splicing factor U2AF 65 kDa subunit
Authors:Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology (TCELL)
Deposit date:2015-07-29
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:UHM-ULM interactions in the RBM39-U2AF65 splicing-factor complex.
Acta Crystallogr D Struct Biol, 72, 2016
3QX9
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BU of 3qx9 by Molmil
Crystal structure of MID domain from hAGO2 in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Protein argonaute-2
Authors:Frank, F, Fabian, M.R, Stepinski, J, Jemielity, J, Darzynkiewicz, E, Sonenberg, N, Nagar, B.
Deposit date:2011-03-01
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of 5'-mRNA-cap interactions with the human AGO2 MID domain.
Embo Rep., 12, 2011
7NT5
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BU of 7nt5 by Molmil
CryoEM structure of the Nipah virus nucleocapsid single helical turn assembly
Descriptor: Nucleoprotein, RNA (78-MER)
Authors:Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
Deposit date:2021-03-09
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
7APN
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BU of 7apn by Molmil
Structure of Lipase TL from bulk agarose grown crystal
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
7APP
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BU of 7app by Molmil
Structure of Lipase TL from capillary grown crystal in the presence of agarose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Lipase, ...
Authors:Gavira, J.A, Martinez-Rodriguez, S, Fernande-Penas, R, Verdugo-Escamilla, C.
Deposit date:2020-10-19
Release date:2021-03-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Production of Cross-Linked Lipase Crystals at a Preparative Scale.
Cryst.Growth Des., 21, 2021
4K6E
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BU of 4k6e by Molmil
Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain in complex with Mg
Descriptor: MAGNESIUM ION, mRNA-decapping enzyme subunit 2
Authors:Aglietti, R.A, Floor, S.N, Gross, J.D.
Deposit date:2013-04-15
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Active site conformational dynamics are coupled to catalysis in the mRNA decapping enzyme dcp2.
Structure, 21, 2013
3THT
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BU of 3tht by Molmil
Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B
Descriptor: 2-OXOGLUTARIC ACID, Alkylated DNA repair protein alkB homolog 8, MANGANESE (II) ION, ...
Authors:Pastore, C, Topalidou, I, Forouhar, F, Yan, A.C, Levy, M, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-08-19
Release date:2011-11-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification.
J.Biol.Chem., 287, 2012
7PZR
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BU of 7pzr by Molmil
Cryo-EM structure of POLRMT in free form.
Descriptor: DNA-directed RNA polymerase, mitochondrial
Authors:Das, H, Hallberg, B.M.
Deposit date:2021-10-13
Release date:2022-11-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Non-coding 7S RNA inhibits transcription via mitochondrial RNA polymerase dimerization.
Cell, 185, 2022
3THP
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BU of 3thp by Molmil
Crystal structure and RNA binding properties of the RRM/AlkB domains in human ABH8, an enzyme catalyzing tRNA hypermodification, Northeast Structural Genomics Consortium Target HR5601B
Descriptor: 2-OXOGLUTARIC ACID, Alkylated DNA repair protein alkB homolog 8, MANGANESE (II) ION, ...
Authors:Pastore, C, Topalidou, I, Forouhar, F, Yan, A.C, Levy, M, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-08-19
Release date:2011-11-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure and RNA binding properties of the RNA recognition motif (RRM) and AlkB domains in human AlkB homolog 8 (ABH8), an enzyme catalyzing tRNA hypermodification.
J.Biol.Chem., 287, 2012
5ULI
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BU of 5uli by Molmil
Crystal Structure of mouse DXO in complex with (3'-NADP)+ and calcium ion
Descriptor: CALCIUM ION, Decapping and exoribonuclease protein, [[(2R,3S,4R,5R)-5-(3-aminocarbonyl-4H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate
Authors:Doamekpor, S.K, Tong, L.
Deposit date:2017-01-24
Release date:2017-05-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:5' End Nicotinamide Adenine Dinucleotide Cap in Human Cells Promotes RNA Decay through DXO-Mediated deNADding.
Cell, 168, 2017
8RBZ
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BU of 8rbz by Molmil
Structure of Integrator-PP2A-SOSS-CTD post-termination complex
Descriptor: DNA-directed RNA polymerase subunit, DSS1, Integrator complex subunit 1, ...
Authors:Fianu, I, Ochmann, M, Walshe, J.L, Cramer, P.
Deposit date:2023-12-05
Release date:2024-02-07
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis of Integrator-dependent RNA polymerase II termination.
Nature, 629, 2024
3CCS
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BU of 3ccs by Molmil
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ...
Authors:Blaha, G, Gurel, G.
Deposit date:2008-02-26
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
J.Mol.Biol., 379, 2008
8B0I
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BU of 8b0i by Molmil
CryoEM structure of bacterial RapZ.GlmZ complex central to the control of cell envelope biogenesis
Descriptor: GlmZ small regulatory RNA, RNase adapter protein RapZ
Authors:Islam, M.S, Hardwick, H.W, Chirgadze, D.Y, Luisi, B.F.
Deposit date:2022-09-07
Release date:2022-10-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
Embo J., 42, 2023
8D58
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BU of 8d58 by Molmil
Crystal structure of human METTL1-WDR4 complex
Descriptor: CHLORIDE ION, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Raj, R, Babu, K, Nam, Y.
Deposit date:2022-06-04
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structures and mechanisms of tRNA methylation by METTL1-WDR4.
Nature, 613, 2023

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數據於2024-10-16公開中

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