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6H7L
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BU of 6h7l by Molmil
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST DOBUTAMINE AND NANOBODY Nb6B9
Descriptor: Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, DOBUTAMINE, ...
Authors:Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G.
Deposit date:2018-07-31
Release date:2018-10-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis for high-affinity agonist binding in GPCRs.
Science, 364, 2019
6GSJ
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BU of 6gsj by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Yusupov, M, Yusupova, G.
Deposit date:2018-06-14
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6H7O
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BU of 6h7o by Molmil
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND WEAK PARTIAL AGONIST CYANOPINDOLOL AND NANOBODY Nb6B9
Descriptor: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, ...
Authors:Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G.
Deposit date:2018-07-31
Release date:2018-10-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular basis for high-affinity agonist binding in GPCRs.
Science, 364, 2019
6GSK
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BU of 6gsk by Molmil
Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Rozov, A, Yusupov, M, Yusupova, G.
Deposit date:2018-06-14
Release date:2018-07-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Tautomeric G•U pairs within the molecular ribosomal grip and fidelity of decoding in bacteria.
Nucleic Acids Res., 46, 2018
6H5I
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BU of 6h5i by Molmil
Single Particle Cryo-EM map of human Transferrin receptor 1 - H-Ferritin complex.
Descriptor: Ferritin heavy chain, Transferrin receptor protein 1
Authors:Testi, C, Montemiglio, L.C, Vallone, B, Des Georges, A, Boffi, A, Mancia, F, Baiocco, P, Savino, C.
Deposit date:2018-07-24
Release date:2019-03-27
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of the human ferritin-transferrin receptor 1 complex.
Nat Commun, 10, 2019
6H7M
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BU of 6h7m by Molmil
ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST SALBUTAMOL AND NANOBODY Nb6B9
Descriptor: Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, HEGA-10, ...
Authors:Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G.
Deposit date:2018-07-31
Release date:2018-10-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Molecular basis for high-affinity agonist binding in GPCRs.
Science, 364, 2019
3GKQ
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BU of 3gkq by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Terminal oxygenase component of carbazole 1,9a-dioxygenase
Authors:Umeda, T, Nojiri, H.
Deposit date:2009-03-11
Release date:2010-03-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Specific interaction via putidaredoxin-type ferredoxin in carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
To be Published
6LW0
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BU of 6lw0 by Molmil
Crystal structure of TLR7/Cpd-6 (DSR-139293) complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-ethoxy-8-(5-fluoranylpyridin-3-yl)-9-[[4-[[(1S,4S)-5-methyl-2,5-diazabicyclo[2.2.1]heptan-2-yl]methyl]phenyl]methyl]purin-6-amine, ...
Authors:Zhang, Z, Ohto, U, Shimizu, T.
Deposit date:2020-02-06
Release date:2020-11-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis reveals TLR7 dynamics underlying antagonism.
Nat Commun, 11, 2020
6LY5
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BU of 6ly5 by Molmil
Organization and energy transfer in a huge diatom PSI-FCPI supercomplex
Descriptor: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Xiong, P, Caizhe, X.
Deposit date:2020-02-13
Release date:2020-10-21
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Structural basis for energy transfer in a huge diatom PSI-FCPI supercomplex.
Nat Commun, 11, 2020
6LP1
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BU of 6lp1 by Molmil
Crystal structure of acetate:succinate CoA transferase (ASCT) from Trypanosoma brucei.
Descriptor: CALCIUM ION, GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase
Authors:Mochizuki, K, Inaoka, D.K, Shiba, T, Fukuda, K, Kurasawa, H, Mazet, M, Millerioux, Y, Bringaud, F, Boshart, M, Balogun, E.O, Harada, S, Hirayama, K, Kita, K.
Deposit date:2020-01-08
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The ASCT/SCS cycle fuels mitochondrial ATP and acetate production in Trypanosoma brucei.
Biochim Biophys Acta Bioenerg, 1861, 2020
6M3L
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BU of 6m3l by Molmil
Crystal structure of the R.PabI(Y68F-K154A)-dsDNA(nonspecific) complex
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*CP*GP*AP*TP*TP*CP*AP*GP*AP*AP*TP*CP*GP*AP*TP*GP*CP*G)-3'), RE_R_Pab1 domain-containing protein
Authors:Miyazono, K, Wang, D, Ito, T, Tanokura, M.
Deposit date:2020-03-04
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI.
Nucleic Acids Res., 48, 2020
3HGK
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BU of 3hgk by Molmil
crystal structure of effect protein AvrptoB complexed with kinase Pto
Descriptor: Effector protein hopAB2, Protein kinase
Authors:Dong, J, Fan, F, Gu, L, Chai, J.
Deposit date:2009-05-14
Release date:2009-06-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the Complex between Pseudomonas Effector AvrPtoB and the Tomato Pto Kinase Reveals Both a Shared and a Unique Interface Compared with AvrPto-Pto
Plant Cell, 21, 2009
6M2A
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BU of 6m2a by Molmil
A non-His-rich type of chimeric sirohydrochlorin nickelochelatase CfbA from M. jannaschii and M. barkeri
Descriptor: SULFATE ION, Sirohydrochlorin cobaltochelatase,Sirohydrochlorin cobaltochelatase,Sirohydrochlorin cobaltochelatase
Authors:Fujishiro, T.
Deposit date:2020-02-26
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:The nickel-sirohydrochlorin formation mechanism of the ancestral class II chelatase CfbA in coenzyme F430 biosynthesis.
Chem Sci, 12, 2021
3HGL
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BU of 3hgl by Molmil
crystal of AvrPtoB 121-205
Descriptor: Effector protein hopAB2
Authors:Dong, J, Xiao, F, Fan, F, Gu, L, Cang, H, Martin, G.B, Chai, J.
Deposit date:2009-05-14
Release date:2009-06-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Complex between Pseudomonas Effector AvrPtoB and the Tomato Pto Kinase Reveals Both a Shared and a Unique Interface Compared with AvrPto-Pto
Plant Cell, 21, 2009
8SNB
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BU of 8snb by Molmil
atomic model of sea urchin sperm doublet microtubule (48-nm periodicity)
Descriptor: ATP6V1FNB, C20Orf85, C4orf45, ...
Authors:Zeng, J, Zhang, R.
Deposit date:2023-04-26
Release date:2023-06-28
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural specializations of the sperm tail.
Cell, 186, 2023
6M0Q
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BU of 6m0q by Molmil
Hydroxylamine oxidoreductase from Nitrosomonas europaea
Descriptor: Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, HEME C, ...
Authors:Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T.
Deposit date:2020-02-22
Release date:2021-03-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
8UTJ
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BU of 8utj by Molmil
E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S11, ...
Authors:Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:2023-10-31
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting
Nat Commun, 2025
6M0P
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BU of 6m0p by Molmil
Hydroxylamine oxidoreductase in complex with juglone
Descriptor: 5-hydroxynaphthalene-1,4-dione, Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, ...
Authors:Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T.
Deposit date:2020-02-22
Release date:2021-03-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
8URM
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BU of 8urm by Molmil
E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
Descriptor: 13S ribosomal RNA, 16S ribosomal RNA, 30S ribosomal protein S11, ...
Authors:Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:2023-10-26
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3 Å)
Cite:An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting
Nat Commun, 2025
8UX8
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BU of 8ux8 by Molmil
E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
Descriptor: 16S ribosomal RNA, 23S rRNA, 30S ribosomal protein S11, ...
Authors:Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:2023-11-09
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting
Nat Commun, 2025
8UZ3
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BU of 8uz3 by Molmil
E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:2023-11-14
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting
Nat Commun, 2025
8UZG
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BU of 8uzg by Molmil
E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Kimbrough, E.M, Dunham, C.M, Nguyen, H.A.
Deposit date:2023-11-15
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An RNA modification prevents extended codon-anticodon interactions from facilitating +1 frameshifting
Nat Commun, 2025
9UMH
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BU of 9umh by Molmil
V-type (V2-type) amyloid fibril (40) of Tottori (D7N) mutant
Descriptor: Amyloid-beta protein 40
Authors:Burton-Smith, R.N, Murata, K.
Deposit date:2025-04-22
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Microgravity-Assisted Exploration of the Conformational Space of Amyloid beta Affected by Tottori-Type Familial Mutation D7N.
Acs Chem Neurosci, 2025
9M5Q
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BU of 9m5q by Molmil
V-type (V1-type) amyloid fibril (40) of Tottori (D7N) mutant
Descriptor: Amyloid-beta protein 40
Authors:Burton-Smith, R.N, Murata, K.
Deposit date:2025-03-06
Release date:2025-07-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Microgravity-Assisted Exploration of the Conformational Space of Amyloid beta Affected by Tottori-Type Familial Mutation D7N.
Acs Chem Neurosci, 2025
8SYL
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BU of 8syl by Molmil
Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs
Descriptor: (2S)-N-[(1R,2S,3S,4R,5S)-4-[(2R,3R,4S,5S,6R)-6-(aminomethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-azanyl-2-[(2S,3R,4S,5S ,6R)-4-azanyl-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-cyclohexyl]-4-azanyl-2-oxidanyl-butanamide, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Seely, S.M, Gagnon, M.G.
Deposit date:2023-05-25
Release date:2023-08-09
Last modified:2025-03-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular basis of the pleiotropic effects by the antibiotic amikacin on the ribosome.
Nat Commun, 14, 2023

238582

數據於2025-07-09公開中

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