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1GRP	REGULATORY AND CATALYTIC MECHANISMS IN ESCHERICHIA COLI ISOCITRATE DEHYDROGENASE: MULTIPLE ROLES FOR N115 Descriptor: ISOCITRATE DEHYDROGENASE, ISOCITRIC ACID, MAGNESIUM ION Authors: Grobler, J.A, Hurley, J.H. Deposit date: 1995-10-12 Release date: 1996-04-03 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Second-site suppression of regulatory phosphorylation in Escherichia coli isocitrate dehydrogenase. Protein Sci., 5, 1996
7ZNL	Structure of the human TREX core THO-UAP56 complex Descriptor: Spliceosome RNA helicase DDX39B, THO complex subunit 1, THO complex subunit 2, ... Authors: Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C. Deposit date: 2022-04-21 Release date: 2023-05-17 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.45 Å) Cite: mRNA recognition and packaging by the human transcription-export complex. Nature, 616, 2023
1GPR	REFINED CRYSTAL STRUCTURE OF IIA DOMAIN OF THE GLUCOSE PERMEASE OF BACILLUS SUBTILIS AT 1.9 ANGSTROMS RESOLUTION Descriptor: GLUCOSE PERMEASE Authors: Liao, D.-I, Herzberg, O. Deposit date: 1991-09-25 Release date: 1993-10-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.9 Å) Cite: An atomic model for protein-protein phosphoryl group transfer. J.Biol.Chem., 267, 1992
2LM5	Solution structure of Ca2+-CIB1 in complex with the cytoplasmic domain of the integrin aIIb subunit Descriptor: CALCIUM ION, Calcium and integrin-binding protein 1 Authors: Huang, H, Vogel, H.J. Deposit date: 2011-11-22 Release date: 2012-02-15 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural basis for the activation of platelet integrin alphaIIb-beta3 by calcium- and integrin-binding protein 1. J.Am.Chem.Soc., 134, 2012
1WG3	Structural analysis of yeast nucleosome-assembly factor CIA1p Descriptor: Anti-silencing protein 1 Authors: Padmanabhan, B, Kataoka, K, Umehara, T, Adachi, N, Yokoyama, S, Horikoshi, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2004-05-27 Release date: 2005-06-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural Similarity between Histone Chaperone Cia1p/Asf1p and DNA-Binding Protein NF-{kappa}B J.Biochem.(Tokyo), 138, 2005
6YW3	HIF PROLYL HYDROXYLASE 2 (PHD2/ EGLN1) in complex with N-Oxalyl Glycine (NOG), HIF-1ALPHA CODD (556-574) and a RaPID-derived cyclic peptide 3C (14-mer) Descriptor: Egl nine homolog 1, GLYCEROL, Hypoxia-inducible factor 1-alpha, ... Authors: Chowdhury, R, Schofield, C.J. Deposit date: 2020-04-29 Release date: 2020-12-30 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.279 Å) Cite: Use of cyclic peptides to induce crystallization: case study with prolyl hydroxylase domain 2. Sci Rep, 10, 2020
6TUN	Helicase domain complex Descriptor: CDK-activating kinase assembly factor MAT1, CHLORIDE ION, General transcription and DNA repair factor IIH helicase subunit XPD Authors: Sauer, F, Kisker, C. Deposit date: 2020-01-07 Release date: 2020-11-11 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.07 Å) Cite: In TFIIH the Arch domain of XPD is mechanistically essential for transcription and DNA repair. Nat Commun, 11, 2020
2MX2	UBX-L domain of VCIP135 Descriptor: Deubiquitinating protein VCIP135 Authors: Iwazu, T, Murayama, S, Igarashi, R, Hrioaki, H, Shirakawa, M, Tochio, H. Deposit date: 2014-12-07 Release date: 2016-07-13 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structure and interaction mode of the UBX-L domain of VCIP135 determined by solution NMR spectroscopy To be Published
6ZX9	Crystal structure of SIV Vpr,fused to T4 lysozyme, isolated from moustached monkey, bound to human DDB1 and human DCAF1 (amino acid residues 1046-1396) Descriptor: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, GLYCEROL, ... Authors: Schwefel, D, Banchenko, S. Deposit date: 2020-07-29 Release date: 2021-07-21 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.519729 Å) Cite: Structural insights into Cullin4-RING ubiquitin ligase remodelling by Vpr from simian immunodeficiency viruses. Plos Pathog., 17, 2021
7ZNK	Structure of an endogenous human TREX complex bound to mRNA Descriptor: RNA, Spliceosome RNA helicase DDX39B, THO complex subunit 1, ... Authors: Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C. Deposit date: 2022-04-21 Release date: 2023-05-03 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: mRNA recognition and packaging by the human transcription-export complex. Nature, 616, 2023
1MFS	DYNAMICAL BEHAVIOR OF THE HIV-1 NUCLEOCAPSID PROTEIN; NMR, 30 STRUCTURES Descriptor: HIV-1 NUCLEOCAPSID PROTEIN, ZINC ION Authors: Summers, M.F, Turner, B.G, De Guzman, R.N, Lee, B.M, Tjandra, N. Deposit date: 1998-04-01 Release date: 1998-06-17 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Dynamical behavior of the HIV-1 nucleocapsid protein. J.Mol.Biol., 279, 1998
4KCA	Crystal Structure of Endo-1,5-alpha-L-arabinanase from a Bovine Ruminal Metagenomic Library Descriptor: Endo-1,5-alpha-L-arabinanase, GLYCEROL, IODIDE ION, ... Authors: Santos, C.R, Polo, C.C, Costa, M.C.M.F, Nascimento, A.F.Z, Wong, D.W.S, Murakami, M.T. Deposit date: 2013-04-24 Release date: 2014-02-05 Last modified: 2014-04-09 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Mechanistic strategies for catalysis adopted by evolutionary distinct family 43 arabinanases. J.Biol.Chem., 289, 2014
2JFX	Crystal structure of Helicobacter pylori glutamate racemase in complex with D-Glutamate Descriptor: D-GLUTAMIC ACID, GLUTAMATE RACEMASE Authors: Xue, Y, Lundqvist, T. Deposit date: 2007-02-06 Release date: 2007-07-03 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Exploitation of Structural and Regulatory Diversity in Glutamate Racemases Nature, 447, 2007
5MQF	Cryo-EM structure of a human spliceosome activated for step 2 of splicing (C* complex) Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, ATP-dependent RNA helicase DHX8, Cell division cycle 5-like protein, ... Authors: Bertram, K, Hartmuth, K, Kastner, B. Deposit date: 2016-12-20 Release date: 2017-03-22 Last modified: 2018-11-21 Method: ELECTRON MICROSCOPY (5.9 Å) Cite: Cryo-EM structure of a human spliceosome activated for step 2 of splicing. Nature, 542, 2017
2JFN	Crystal structure of Escherichia coli glutamate racemase in complex with L- Glutamate and activator UDP-MurNAc-ala Descriptor: GLUTAMATE RACEMASE, GLUTAMIC ACID, URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE Authors: Lundqvist, T. Deposit date: 2007-02-03 Release date: 2007-07-03 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Exploitation of Structural and Regulatory Diversity in Glutamate Racemases Nature, 447, 2007
2JES	Portal protein (gp6) from bacteriophage SPP1 Descriptor: CALCIUM ION, MERCURY (II) ION, PORTAL PROTEIN, ... Authors: Lebedev, A.A, Krause, M.H, Isidro, A.L, Vagin, A.A, Orlova, E.V, Turner, J, Dodson, E.J, Tavares, P, Antson, A.A. Deposit date: 2007-01-21 Release date: 2007-03-27 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Structural Framework for DNA Translocation Via the Viral Portal Protein Embo J., 26, 2007
2KMT	NMR solution structure of Vibrio fischeri CcdB Descriptor: CcdB Authors: Zangger, K. Deposit date: 2009-08-04 Release date: 2009-12-01 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural and Thermodynamic Characterization of Vibrio fischeri CcdB. J.Biol.Chem., 285, 2010
2KLE	ISIC Refined Solution Structure of the Calcium Binding Domain of the C-terminal Cytosolic Domain of Polycystin-2 Descriptor: Polycystin-2 Authors: Kalbitzer, H.R. Deposit date: 2009-07-01 Release date: 2009-07-28 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: NMR-assignments of a cytosolic domain of the C-terminus of polycystin-2 Biomol.Nmr Assign., 3, 2009
2KDO	Structure of the human Shwachman-Bodian-Diamond syndrome protein, SBDS Descriptor: Ribosome maturation protein SBDS Authors: de Oliveira, J.F, Sforca, M.L, Blumenschein, T, Guimaraes, B.G, Zanchin, N.I.T, Zeri, A.C. Deposit date: 2009-01-14 Release date: 2010-01-19 Last modified: 2024-05-08 Method: SOLUTION NMR Cite: Structure, dynamics, and RNA interaction analysis of the human SBDS protein. J.Mol.Biol., 396, 2010
2KE6	Solution Structure of K10 TLS RNA Descriptor: K10 TLS RNA Authors: Bullock, S.L, Ringel, I, Ish-Horowicz, D. Deposit date: 2009-01-23 Release date: 2010-01-26 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: A'-form RNA helices are required for cytoplasmic mRNA transport in Drosophila Nat.Struct.Mol.Biol., 17, 2010
2K6D	CIN85 Sh3-C domain in complex with ubiquitin Descriptor: SH3 domain-containing kinase-binding protein 1, Ubiquitin Authors: Forman-Kay, J, Bezsonova, I. Deposit date: 2008-07-07 Release date: 2008-08-19 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Interactions between the three CIN85 SH3 domains and ubiquitin: implications for CIN85 ubiquitination. Biochemistry, 47, 2008
2KLD	Solution Structure of the Calcium Binding Domain of the C-terminal Cytosolic Domain of Polycystin-2 Descriptor: Polycystin-2 Authors: Kalbitzer, H.R. Deposit date: 2009-07-01 Release date: 2009-07-28 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: NMR-assignments of a cytosolic domain of the C-terminus of polycystin-2 Biomol.Nmr Assign., 3, 2009
2K9G	Solution structure of the third SH3 domain of the Cin85 adapter protein Descriptor: SH3 domain-containing kinase-binding protein 1 Authors: Philippe, D.L, Ladbury, J.E, Pfuhl, M. Deposit date: 2008-10-10 Release date: 2009-10-13 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of the Sh3-C domain of Cin85 To be Published
2K7W	BAX Activation is Initiated at a Novel Interaction Site Descriptor: Apoptosis regulator BAX, Bcl-2-like protein 11 Authors: Gavathiotis, E, Suzuki, M, Davis, M.L, Pitter, K, Bird, G.H, Katz, S.G, Tu, H.C, Kim, H, Cheng, E.H, Tjandra, N, Walensky, L.D. Deposit date: 2008-08-27 Release date: 2008-10-21 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: BAX activation is initiated at a novel interaction site. Nature, 455, 2008
2KQC	Second PBZ domain of human APLF protein Descriptor: Aprataxin and PNK-like factor, ZINC ION Authors: Neuhaus, D, Eustermann, S, Brockmann, C, Yang, J. Deposit date: 2009-11-04 Release date: 2010-01-19 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structures of the two PBZ domains from human APLF and their interaction with poly(ADP-ribose). Nat.Struct.Mol.Biol., 17, 2010

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