Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DUR
DownloadVisualize
BU of 6dur by Molmil
Citrobacter freundii tyrosine phenol-lyase complexed with L-phenylalanine
Descriptor: (2E)-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}-3-phenylpropanoic acid, (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-phenylalanine, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
Authors:Phillips, R.S.
Deposit date:2018-06-21
Release date:2018-10-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Wild-Type and F448A Mutant Citrobacter freundii Tyrosine Phenol-Lyase Complexed with a Substrate and Inhibitors: Implications for the Reaction Mechanism.
Biochemistry, 57, 2018
6DDW
DownloadVisualize
BU of 6ddw by Molmil
Mycobacterium tuberculosis Dihydrofolate Reductase complexed with beta-NADPH and N-(4-{[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]amino}-2-hydroxybenzene-1-carbonyl)-L-glutamic acid
Descriptor: Dihydrofolate reductase, GLYCEROL, N-(4-{[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]amino}-2-hydroxybenzene-1-carbonyl)-L-glutamic acid, ...
Authors:Hajian, B, Scocchera, E, Wright, D.
Deposit date:2018-05-10
Release date:2018-05-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Drugging the Folate Pathway in Mycobacterium tuberculosis: The Role of Multi-targeting Agents.
Cell Chem Biol, 26, 2019
5KRJ
DownloadVisualize
BU of 5krj by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with an a-naphthyl Substituted OBHS derivative
Descriptor: Estrogen receptor, NCOA2, naphthalen-1-yl (1~{S},2~{R},4~{S})-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate
Authors:Nwachukwu, J.C, Srinivasan, S, Bruno, N.E, Nowak, J, Kojetin, D.J, Elemento, O, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-07-07
Release date:2017-01-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Systems Structural Biology Analysis of Ligand Effects on ER alpha Predicts Cellular Response to Environmental Estrogens and Anti-hormone Therapies.
Cell Chem Biol, 24, 2017
7XS0
DownloadVisualize
BU of 7xs0 by Molmil
Trimer structure of HtrA from Helicobacter pylori bound with a tripeptide
Descriptor: Periplasmic serine endoprotease DegP-like, UNK-UNK-UNK
Authors:Cui, L, Liu, W.
Deposit date:2022-05-12
Release date:2023-05-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structures and solution conformations of HtrA from Helicobacter pylori reveal pH-dependent oligomeric conversion and conformational rearrangements.
Int.J.Biol.Macromol., 243, 2023
7Y2P
DownloadVisualize
BU of 7y2p by Molmil
Crystal structure of CUG repeat RNA duplex containing A-U base pair and U-U mismatches
Descriptor: RNA (5'-R(P*UP*UP*CP*UP*GP*CP*AP*GP*CP*UP*GP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*UP*GP*CP*UP*GP*CP*UP*GP*AP*A)-3')
Authors:Wang, S.C, Satange, R.B, Hou, M.H.
Deposit date:2022-06-09
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural basis for water modulating RNA duplex formation in the CUG repeats of myotonic dystrophy type 1.
J.Biol.Chem., 299, 2023
5KVY
DownloadVisualize
BU of 5kvy by Molmil
CRYSTAL STRUCTURE OF THE TWO TANDEM RRM DOMAINS OF PUF60 BOUND TO A PORTION OF AN ADML PRE-MRNA 3' SPLICE SITE ANALOG
Descriptor: CHLORIDE ION, DNA (30-MER), Poly(U)-binding-splicing factor PUF60
Authors:Hsiao, H.-H, Crichlow, G.V, Albright, R.A, Murphy, J.W, Lolis, E.J, Braddock, D.T.
Deposit date:2016-07-15
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unraveling the mechanism of recognition of the 3' splice site of the adenovirus major late promoter intron by the alternative splicing factor PUF60.
Plos One, 15, 2020
6L1Y
DownloadVisualize
BU of 6l1y by Molmil
structure of gp120/CD4 with a non-canonical surface
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, T-cell surface glycoprotein CD4, ...
Authors:Liu, X, Ning, W.
Deposit date:2019-10-01
Release date:2020-05-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.469 Å)
Cite:A non-canonical binding interface in the crystal structure of HIV-1 gp120 core in complex with CD4.
Sci Rep, 7, 2017
7Y2B
DownloadVisualize
BU of 7y2b by Molmil
Crystal structure of CUG repeat RNA duplex containing U-U mismatches
Descriptor: RNA (5'-R(P*UP*UP*CP*UP*GP*CP*UP*GP*CP*UP*GP*AP*A)-3')
Authors:Wang, S.C, Satange, R.B, Hou, M.H.
Deposit date:2022-06-09
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural basis for water modulating RNA duplex formation in the CUG repeats of myotonic dystrophy type 1.
J.Biol.Chem., 299, 2023
7XSC
DownloadVisualize
BU of 7xsc by Molmil
Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-2B10
Descriptor: P5S-2B10 Heavy chain, P5S-2B10 Light chain, Spike protein S1
Authors:Wang, X, Wang, Z, Lin, Z.
Deposit date:2022-05-13
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Infection with wild-type SARS-CoV-2 elicits broadly neutralizing and protective antibodies against omicron subvariants.
Nat.Immunol., 24, 2023
7Y8P
DownloadVisualize
BU of 7y8p by Molmil
Crystal structure of 4'-selenoRNA duplex
Descriptor: COBALT HEXAMMINE(III), RNA (5'-R(*GP*GP*AP*(IKS)P*(ILK)P*(IKS)P*GP*AP*GP*UP*CP*C)-3')
Authors:Kondo, J, Minakawa, N, Ohta, M, Takahashi, H, Tarashima, N.
Deposit date:2022-06-24
Release date:2023-05-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Synthesis and properties of fully-modified 4'-selenoRNA, an endonuclease-resistant RNA analog.
Bioorg.Med.Chem., 76, 2022
7XSA
DownloadVisualize
BU of 7xsa by Molmil
Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P2S-2E9 Fab
Descriptor: P2S-2E9 Heavy chain, P2S-2E9 Light chain, Spike protein S1
Authors:Wang, X, Wang, Z.
Deposit date:2022-05-13
Release date:2023-05-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Infection with wild-type SARS-CoV-2 elicits broadly neutralizing and protective antibodies against omicron subvariants.
Nat.Immunol., 24, 2023
7XRZ
DownloadVisualize
BU of 7xrz by Molmil
Crystal structure of BRIL and SRP2070_Fab complex
Descriptor: IGG HEAVY CHAIN, IGG LIGHT CHAIN, Soluble cytochrome b562
Authors:Suzuki, M, Miyagi, H, Yasunaga, M, Asada, H, Iwata, S, Saito, J.
Deposit date:2022-05-12
Release date:2023-05-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into an anti-BRIL Fab as a G-protein-coupled receptor crystallization chaperone.
Acta Crystallogr D Struct Biol, 79, 2023
7XSB
DownloadVisualize
BU of 7xsb by Molmil
Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-3B11 Fab
Descriptor: P5S-3B11 Heavy chain, P5S-3B11 Light chain, Spike protein S1
Authors:Wang, X, Wang, Z, Gao, M.
Deposit date:2022-05-13
Release date:2023-05-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Infection with wild-type SARS-CoV-2 elicits broadly neutralizing and protective antibodies against omicron subvariants.
Nat.Immunol., 24, 2023
7Y5J
DownloadVisualize
BU of 7y5j by Molmil
Crystal structure of sDscam Ig1 domain, isoform alpha1v7
Descriptor: Down Syndrome Cell Adhesion Molecules
Authors:Chen, Q, Yu, Y, Cheng, J.
Deposit date:2022-06-17
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the self-recognition of sDSCAM in Chelicerata.
Nat Commun, 14, 2023
7Y5R
DownloadVisualize
BU of 7y5r by Molmil
Crystal structure of sDscam FNIII2 domain, isoform alpha7
Descriptor: Down Syndrome Cell Adhesion Molecules, GLYCEROL
Authors:Chen, Q, Yu, Y, Cheng, J.
Deposit date:2022-06-17
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.562 Å)
Cite:Structural basis for the self-recognition of sDSCAM in Chelicerata.
Nat Commun, 14, 2023
5KIX
DownloadVisualize
BU of 5kix by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I92E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Skerritt, L.A, Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2016-06-17
Release date:2016-06-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS I92E at cryogenic temperature
To be Published
7Y73
DownloadVisualize
BU of 7y73 by Molmil
Crystal structure of sDscam Ig1 domain, isoform beta3v7
Descriptor: Down Syndrome Cell Adhesion Molecules, GLYCEROL
Authors:Chen, Q, Yu, Y, Cheng, J.
Deposit date:2022-06-21
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structural basis for the self-recognition of sDSCAM in Chelicerata.
Nat Commun, 14, 2023
7YJ0
DownloadVisualize
BU of 7yj0 by Molmil
Structural basis of oxepinone formation by a flavin-monooxygenase VibO
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, VibO
Authors:Zhang, M.F, Pan, L.F.
Deposit date:2022-07-18
Release date:2023-05-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:A flavin-monooxygenase catalyzing oxepinone formation and the complete biosynthesis of vibralactone.
Nat Commun, 14, 2023
5KL1
DownloadVisualize
BU of 5kl1 by Molmil
Crystal structure of the Pumilio-Nos-hunchback RNA complex
Descriptor: Maternal protein pumilio, Protein nanos, RNA (5'-R(*AP*AP*AP*UP*UP*GP*UP*AP*CP*AP*UP*A)-3'), ...
Authors:Qiu, C, Hall, T.M.T.
Deposit date:2016-06-23
Release date:2016-08-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.701 Å)
Cite:Drosophila Nanos acts as a molecular clamp that modulates the RNA-binding and repression activities of Pumilio.
Elife, 5, 2016
7Y54
DownloadVisualize
BU of 7y54 by Molmil
Crystal structure of sDscam Ig1 domain, isoform alpha1
Descriptor: Down Syndrome Cell Adhesion Molecules
Authors:Chen, Q, Yu, Y, Cheng, J.
Deposit date:2022-06-16
Release date:2023-05-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.787 Å)
Cite:Structural basis for the self-recognition of sDSCAM in Chelicerata.
Nat Commun, 14, 2023
5KM9
DownloadVisualize
BU of 5km9 by Molmil
Human Histidine Triad Nucleotide Binding Protein 2 (hHint2) adenosine complex
Descriptor: ADENOSINE, CHLORIDE ION, GLYCEROL, ...
Authors:Maize, K.M, Finzel, B.C.
Deposit date:2016-06-26
Release date:2017-06-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides.
Mol. Pharm., 14, 2017
5L7K
DownloadVisualize
BU of 5l7k by Molmil
The crystal structure of myristoylated NPHP3 peptide in complex with UNC119a
Descriptor: GLY-THR-ALA-SER-SER-LEU, MYRISTIC ACID, Protein unc-119 homolog A
Authors:Fansa, E.K, Jaiswal, M, Wittinghofer, A.
Deposit date:2016-06-03
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel Biochemical and Structural Insights into the Interaction of Myristoylated Cargo with Unc119 Protein and Their Release by Arl2/3.
J.Biol.Chem., 291, 2016
5KMX
DownloadVisualize
BU of 5kmx by Molmil
Structure of Trypanosoma congolense Insect Stage Antigen
Descriptor: GLYCEROL, Putative uncharacterized protein TCIL3000_10_9440, SULFATE ION
Authors:Ramaswamy, R, Parker, M.L, Boulanger, M.J.
Deposit date:2016-06-27
Release date:2017-07-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.452 Å)
Cite:Structural characterization reveals a novel bilobed architecture for the ectodomains of insect stage expressed Trypanosoma brucei PSSA-2 and Trypanosoma congolense ISA.
Protein Sci., 25, 2016
7YGP
DownloadVisualize
BU of 7ygp by Molmil
DNA duplex containing 5OHU-T base pairs
Descriptor: COBALT (II) ION, COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*AP*CP*CP*TP*(OHU)P*GP*GP*TP*CP*C)-3')
Authors:Kondo, J, Torigoe, H, Arakawa, F.
Deposit date:2022-07-12
Release date:2023-05-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Specific binding of Hg 2+ to mismatched base pairs involving 5-hydroxyuracil in duplex DNA.
J.Inorg.Biochem., 241, 2023
7YGO
DownloadVisualize
BU of 7ygo by Molmil
DNA duplex containing 5OHU-Hg(II)-T base pairs
Descriptor: DNA (5'-D(*GP*GP*AP*CP*CP*TP*(6HU)P*GP*GP*TP*CP*C)-3'), MERCURY (II) ION
Authors:Kondo, J, Torigoe, H, Arakawa, F.
Deposit date:2022-07-12
Release date:2023-05-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Specific binding of Hg 2+ to mismatched base pairs involving 5-hydroxyuracil in duplex DNA.
J.Inorg.Biochem., 241, 2023

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon