Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8Y3R
DownloadVisualize
BU of 8y3r by Molmil
ASFV p72 in complex with Fab H3
Descriptor: B646L, Heavy chain of H3, Light chain of H3
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-01-29
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
5T1D
DownloadVisualize
BU of 5t1d by Molmil
Crystal structure of EBV gHgL/gp42/E1D1 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, E1D1 IgG2a heavy chain, E1D1 IgG2a light chain, ...
Authors:Sathiyamoorthy, K, Jardetzky, T.S.
Deposit date:2016-08-18
Release date:2016-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for Epstein-Barr virus host cell tropism mediated by gp42 and gHgL entry glycoproteins.
Nat Commun, 7, 2016
8ZL9
DownloadVisualize
BU of 8zl9 by Molmil
ASFV p72 in complex with Fab G6
Descriptor: B646L, G6 Heavy chain, G6 Light chain
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-05-17
Release date:2024-09-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
6D1Y
DownloadVisualize
BU of 6d1y by Molmil
Crystal structure of Tyrosine-protein kinase receptor in complex with 2,4-dichloro-N-(3-methyl-1-phenyl-1H-pyrazol-5-yl)benzamide Inhibitor
Descriptor: 2,4-dichloro-N-(3-methyl-1-phenyl-1H-pyrazol-5-yl)benzamide, High affinity nerve growth factor receptor
Authors:Greasley, S.E, Johnson, E, Kraus, M.L, Cronin, C.N.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Discovery of Allosteric, Potent, Subtype Selective, and Peripherally Restricted TrkA Kinase Inhibitors.
J. Med. Chem., 62, 2019
5W0Z
DownloadVisualize
BU of 5w0z by Molmil
Crystal structure of MBP fused activation-induced cytidine deaminase (AID)
Descriptor: MBP fused activation-induced cytidine deaminase, ZINC ION
Authors:Qiao, Q, Wang, L, Wu, H.
Deposit date:2017-06-01
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:AID Recognizes Structured DNA for Class Switch Recombination.
Mol. Cell, 67, 2017
5T1L
DownloadVisualize
BU of 5t1l by Molmil
Cetuximab Fab in complex with CQA(Ph)2DLSTRRLKC peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CETUXIMAB FAB HEAVY CHAIN, CETUXIMAB FAB LIGHT CHAIN, ...
Authors:Bzymek, K.P, Williams, J.C.
Deposit date:2016-08-19
Release date:2016-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Acta Crystallogr F Struct Biol Commun, 72, 2016
6D22
DownloadVisualize
BU of 6d22 by Molmil
Crystal structure of Tyrosine-protein kinase receptor
Descriptor: Tyrosine-protein kinase receptor
Authors:Greasley, S.E, Brown, D.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Discovery of Allosteric, Potent, Subtype Selective, and Peripherally Restricted TrkA Kinase Inhibitors.
J. Med. Chem., 62, 2019
6D20
DownloadVisualize
BU of 6d20 by Molmil
Crystal structure of Tyrosine-protein kinase receptor in complex with 5-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4(3H)-one and 5-{[2,4-dichloro-5-(pyridin-2-yl)benzene-1-carbonyl]amino}-N-(2-hydroxy-2-methylpropyl)-1-phenyl-1H-pyrazole-3-carboxamide Inhibitors
Descriptor: 5-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4(3H)-one, 5-{[2,4-dichloro-5-(pyridin-2-yl)benzene-1-carbonyl]amino}-N-(2-hydroxy-2-methylpropyl)-1-phenyl-1H-pyrazole-3-carboxamide, High affinity nerve growth factor receptor
Authors:Greasley, S.E, Johnson, E, Kraus, M.L, Cronin, C.N.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Discovery of Allosteric, Potent, Subtype Selective, and Peripherally Restricted TrkA Kinase Inhibitors.
J. Med. Chem., 62, 2019
6D1Z
DownloadVisualize
BU of 6d1z by Molmil
Crystal structure of Tyrosine-protein kinase receptor in complex with 5-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4(3H)-one Inhibitor
Descriptor: 5-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4(3H)-one, 5-{[5-(6-aminopyridin-2-yl)-2-chlorobenzene-1-carbonyl]amino}-1-phenyl-1H-pyrazole-3-carboxamide, GLYCEROL, ...
Authors:Greasley, S.E, Johnson, E, Kraus, M.L, Cronin, C.N.
Deposit date:2018-04-12
Release date:2018-05-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Discovery of Allosteric, Potent, Subtype Selective, and Peripherally Restricted TrkA Kinase Inhibitors.
J. Med. Chem., 62, 2019
6D6U
DownloadVisualize
BU of 6d6u by Molmil
Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Zhu, S, Noviello, C.M, Teng, J, Walsh Jr, R.M, Kim, J.J, Hibbs, R.E.
Deposit date:2018-04-22
Release date:2018-06-27
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Structure of a human synaptic GABAAreceptor.
Nature, 559, 2018
5W0U
DownloadVisualize
BU of 5w0u by Molmil
Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with dCMP
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*TP*GP*AP*AP*C)-3'), ...
Authors:Qiao, Q, Wang, L, Wu, H.
Deposit date:2017-05-31
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:AID Recognizes Structured DNA for Class Switch Recombination.
Mol. Cell, 67, 2017
5W0R
DownloadVisualize
BU of 5w0r by Molmil
Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cacodylic acid
Descriptor: CACODYLATE ION, CALCIUM ION, MBP fused activation-induced cytidine deaminase, ...
Authors:Qiao, Q, Wang, L, Wu, H.
Deposit date:2017-05-31
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:AID Recognizes Structured DNA for Class Switch Recombination.
Mol. Cell, 67, 2017
5W1C
DownloadVisualize
BU of 5w1c by Molmil
Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cytidine
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*TP*GP*AP*AP*C)-3'), ...
Authors:Qiao, Q, Wang, L, Wu, H.
Deposit date:2017-06-02
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:AID Recognizes Structured DNA for Class Switch Recombination.
Mol. Cell, 67, 2017
7CEA
DownloadVisualize
BU of 7cea by Molmil
Crystal structure of HUTS-4 Fv-clasp fragment
Descriptor: HUTS-4 VH(S112C)-SARAH, HUTS-4 VL(C87Y)-SARAH(S37C)
Authors:Arimori, T, Takagi, J.
Deposit date:2020-06-22
Release date:2021-06-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural mechanism of laminin recognition by integrin.
Nat Commun, 12, 2021
7DFB
DownloadVisualize
BU of 7dfb by Molmil
Crystal of Arrestin2-V2Rpp-6-7-Fab30 complex
Descriptor: Beta-arrestin-1, FAB30 HEAVY CHAIN, FAB30 LIGHT CHAIN, ...
Authors:Sun, J.P, Yu, X, Xiao, P, He, Q.T, Lin, J.Y, Zhu, Z.L.
Deposit date:2020-11-06
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Structural studies of phosphorylation-dependent interactions between the V2R receptor and arrestin-2.
Nat Commun, 12, 2021
7DFA
DownloadVisualize
BU of 7dfa by Molmil
Crystal of Arrestin2-V2Rpp-4-Fab30 complex
Descriptor: Beta-arrestin-1, FAB30 HEAVY CHAIN, FAB30 LIGHT CHAIN, ...
Authors:Sun, J.P, Yu, X, Xiao, P, He, Q.T, Lin, J.Y, Zhu, Z.L.
Deposit date:2020-11-06
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural studies of phosphorylation-dependent interactions between the V2R receptor and arrestin-2.
Nat Commun, 12, 2021
7DF9
DownloadVisualize
BU of 7df9 by Molmil
Crystal of Arrestin2-V2Rpp-1-Fab30 complex
Descriptor: Beta-arrestin-1, FAB30 HEAVY CHAIN, FAB30 LIGHT CHAIN, ...
Authors:Sun, J.P, Yu, X, Xiao, P, He, Q.T, Lin, J.Y, Zhu, Z.L.
Deposit date:2020-11-06
Release date:2021-07-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structural studies of phosphorylation-dependent interactions between the V2R receptor and arrestin-2.
Nat Commun, 12, 2021
7DFC
DownloadVisualize
BU of 7dfc by Molmil
Crystal of Arrestin2-V2Rpp-3-Fab30 complex
Descriptor: Beta-arrestin-1, FAB30 HEAVY CHAIN, FAB30 LIGHT CHAIN, ...
Authors:Sun, J.P, Yu, X, Xiao, P, He, Q.T, Lin, J.Y, Zhu, Z.L.
Deposit date:2020-11-06
Release date:2021-07-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural studies of phosphorylation-dependent interactions between the V2R receptor and arrestin-2.
Nat Commun, 12, 2021
7EDJ
DownloadVisualize
BU of 7edj by Molmil
Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2 (ACE2) ectodomain, ...
Authors:Yang, T.J, Yu, P.Y, Chang, Y.C, Wu, H.C, Hsu, S.T.D.
Deposit date:2021-03-16
Release date:2021-09-01
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.
Nat.Struct.Mol.Biol., 28, 2021
7EDI
DownloadVisualize
BU of 7edi by Molmil
Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7), two RBD-up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Yang, T.J, Yu, P.Y, Chang, Y.C, Wu, H.C, Hsu, S.T.D.
Deposit date:2021-03-16
Release date:2021-09-01
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.
Nat.Struct.Mol.Biol., 28, 2021
7EDH
DownloadVisualize
BU of 7edh by Molmil
Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7), one RBD-up conformation 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Yang, T.J, Yu, P.Y, Chang, Y.C, Wu, H.C, Hsu, S.T.D.
Deposit date:2021-03-16
Release date:2021-09-01
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.
Nat.Struct.Mol.Biol., 28, 2021
7EDF
DownloadVisualize
BU of 7edf by Molmil
Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7), one RBD-up conformation 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Yang, T.J, Yu, P.Y, Chang, Y.C, Wu, H.C, Hsu, S.T.D.
Deposit date:2021-03-16
Release date:2021-09-01
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.
Nat.Struct.Mol.Biol., 28, 2021
7EDG
DownloadVisualize
BU of 7edg by Molmil
Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7), one RBD-up conformation 2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Yang, T.J, Yu, P.Y, Chang, Y.C, Wu, H.C, Hsu, S.T.D.
Deposit date:2021-03-16
Release date:2021-09-01
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Effect of SARS-CoV-2 B.1.1.7 mutations on spike protein structure and function.
Nat.Struct.Mol.Biol., 28, 2021
7EC7
DownloadVisualize
BU of 7ec7 by Molmil
Crystal structure of SdgB (complexed with phosphate ions)
Descriptor: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
Authors:Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
Deposit date:2021-03-11
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC6
DownloadVisualize
BU of 7ec6 by Molmil
Crystal structure of SdgB (complexed with peptides)
Descriptor: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
Authors:Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
Deposit date:2021-03-11
Release date:2022-03-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021

225946

數據於2024-10-09公開中

PDB statisticsPDBj update infoContact PDBjnumon