Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5M6O
DownloadVisualize
BU of 5m6o by Molmil
Frutapin complexed with alpha-D-mannose
Descriptor: Frutapin, alpha-D-mannopyranose
Authors:de Sousa, F.D, Guo, J, Coker, A.R, de Oliveira Monteiro-Moreira, A, de Azevedo Moreira, R.
Deposit date:2016-10-25
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Frutapin, a lectin fromArtocarpus incisa(breadfruit): cloning, expression and molecular insights.
Biosci. Rep., 37, 2017
5UUA
DownloadVisualize
BU of 5uua by Molmil
Tetragonal thermolysin cryocooled to 100 K with 50% xylose as cryoprotectant
Descriptor: CALCIUM ION, CHLORIDE ION, Thermolysin, ...
Authors:Juers, D.H.
Deposit date:2017-02-16
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.60000384 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
4OS3
DownloadVisualize
BU of 4os3 by Molmil
Three-dimensional structure of the C65A-W112F double mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
7BKO
DownloadVisualize
BU of 7bko by Molmil
Crystal structure of CHK1 complex with compound 9
Descriptor: 1H-pyrazolo[3,4-d]pyrimidin-4-amine, Serine/threonine-protein kinase Chk1
Authors:Baker, L.M, Surgenor, A.E, Williamson, D.S.
Deposit date:2021-01-16
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design and Synthesis of Pyrrolo[2,3- d ]pyrimidine-Derived Leucine-Rich Repeat Kinase 2 (LRRK2) Inhibitors Using a Checkpoint Kinase 1 (CHK1)-Derived Crystallographic Surrogate.
J.Med.Chem., 64, 2021
4G2I
DownloadVisualize
BU of 4g2i by Molmil
Structural basis for the accommodation of bis- and tris-aromatic derivatives in Vitamin D Nuclear Receptor
Descriptor: (3E,5E)-6-(3-{2-[3,4-bis(hydroxymethyl)phenyl]ethyl}phenyl)-1,1,1-trifluoro-2-(trifluoromethyl)octa-3,5-dien-2-ol, Vitamin D3 receptor
Authors:Ciesielski, F, Sato, Y, Moras, D, Rochel, N.
Deposit date:2012-07-12
Release date:2012-09-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the accommodation of bis- and tris-aromatic derivatives in vitamin d nuclear receptor.
J.Med.Chem., 55, 2012
4ORW
DownloadVisualize
BU of 4orw by Molmil
Three-dimensional structure of the C65A-K59A double mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.664 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
4OS8
DownloadVisualize
BU of 4os8 by Molmil
Three-dimensional structure of the C65A-W54F-W112F triple mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
6V82
DownloadVisualize
BU of 6v82 by Molmil
Crystal structure of tryptophan synthase from Chlamydia trachomatis D/UW-3/CX
Descriptor: SULFATE ION, Tryptophan synthase alpha chain, Tryptophan synthase beta chain, ...
Authors:Michalska, K, Maltseva, N, Jedrzejczak, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-12-10
Release date:2020-12-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.424 Å)
Cite:Catalytically impaired TrpA subunit of tryptophan synthase from Chlamydia trachomatis is an allosteric regulator of TrpB.
Protein Sci., 30, 2021
5UU9
DownloadVisualize
BU of 5uu9 by Molmil
Tetragonal thermolysin cryocooled to 100 K with 40% xylose as cryoprotectant
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, Thermolysin, ...
Authors:Juers, D.H.
Deposit date:2017-02-16
Release date:2017-03-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.599692 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
5UWV
DownloadVisualize
BU of 5uwv by Molmil
Crystal structure of Mycobacterium abscessus L,D-transpeptidase 2
Descriptor: L,D-TRANSPEPTIDASE 2
Authors:Kumar, P, Ginell, S.L, Lamichhane, G.
Deposit date:2017-02-21
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Mycobacterium abscessus l,d-Transpeptidases Are Susceptible to Inactivation by Carbapenems and Cephalosporins but Not Penicillins.
Antimicrob. Agents Chemother., 61, 2017
3V0H
DownloadVisualize
BU of 3v0h by Molmil
Crystal structure of Ciona intestinalis voltage sensor-containing phosphatase (Ci-VSP), residues 241-576(C363S), complexed with D-MYO-inositol-1,4,5-triphosphate
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Voltage-sensor containing phosphatase
Authors:Liu, L, Kohout, S.C, Xu, Q, Muller, S, Kimberlin, C, Isacoff, E.Y, Minor, D.L.
Deposit date:2011-12-08
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A glutamate switch controls voltage-sensitive phosphatase function.
Nat.Struct.Mol.Biol., 19, 2012
4P7L
DownloadVisualize
BU of 4p7l by Molmil
Structure of Escherichia coli PgaB C-terminal domain, P212121 crystal form
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase
Authors:Little, D.J, Li, G, Ing, C, DiFrancesco, B, Bamford, N.C, Robinson, H, Nitz, M, Pomes, R, Howell, P.L.
Deposit date:2014-03-27
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Modification and periplasmic translocation of the biofilm exopolysaccharide poly-beta-1,6-N-acetyl-D-glucosamine.
Proc.Natl.Acad.Sci.USA, 111, 2014
4ORX
DownloadVisualize
BU of 4orx by Molmil
Three-dimensional structure of the C65A-K59A double mutant of Human lipocalin-type Prostaglandin D Synthase holo-form
Descriptor: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Prostaglandin-H2 D-isomerase, SULFATE ION
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
4ORR
DownloadVisualize
BU of 4orr by Molmil
Threedimensional structure of the C65A mutant of Human lipocalin-type Prostaglandin D Synthase olo-form
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Prostaglandin-H2 D-isomerase, SULFATE ION
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
3W2P
DownloadVisualize
BU of 3w2p by Molmil
EGFR Kinase domain T790M/L858R mutant with compound 2
Descriptor: Epidermal growth factor receptor, N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-4-(dimethylamino)butanamide
Authors:Sogabe, S, Kawakita, Y, Igaki, S.
Deposit date:2012-12-03
Release date:2013-01-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-Based Approach for the Discovery of Pyrrolo[3,2-d]pyrimidine-Based EGFR T790M/L858R Mutant Inhibitors.
Acs Med.Chem.Lett., 4, 2013
4ORS
DownloadVisualize
BU of 4ors by Molmil
Three-dimensional structure of the C65A mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
Descriptor: Prostaglandin-H2 D-isomerase, SULFATE ION
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
4ORU
DownloadVisualize
BU of 4oru by Molmil
Three-dimensional structure of the C65A mutant of Human lipocalin-type Prostaglandin D Synthase holo-form second space group
Descriptor: 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL, Prostaglandin-H2 D-isomerase
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
1OMK
DownloadVisualize
BU of 1omk by Molmil
The Crystal Structure of d(CACG(5IU)G)
Descriptor: 5'-D(*CP*AP*CP*GP*(5IU)P*G)-3', COBALT HEXAMMINE(III)
Authors:Schuerman, G, Van Hecke, K, Van Meervelt, L.
Deposit date:2003-02-25
Release date:2003-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Exploration of the influence of 5-iodo-2'-deoxyuridine incorporation on the structure of d[CACG(IDU)G].
Acta Crystallogr.,Sect.D, 59, 2003
3CS4
DownloadVisualize
BU of 3cs4 by Molmil
Structure-based design of a superagonist ligand for the vitamin D nuclear receptor
Descriptor: (1S,3R,5Z,7E,14beta,17alpha)-17-[(2S,4S)-4-(2-hydroxy-2-methylpropyl)-2-methyltetrahydrofuran-2-yl]-9,10-secoandrosta-5,7,10-triene-1,3-diol, Vitamin D3 receptor
Authors:Hourai, S, Rodriguez, L.C, Antony, P, Reina-San-Martin, B, Ciesielski, F, Magnier, B.C, Schoonjans, K, Mourino, A, Rochel, N, Moras, D.
Deposit date:2008-04-09
Release date:2008-05-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based design of a superagonist ligand for the vitamin d nuclear receptor.
Chem.Biol., 15, 2008
6U1K
DownloadVisualize
BU of 6u1k by Molmil
Thermus thermophilus D-alanine-D-alanine ligase in complex with ADP, carbonate, D-alanine-D-alanine, Mg2+ and K+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CARBONATE ION, D-ALANINE, ...
Authors:Pederick, J.L, Bruning, J.B.
Deposit date:2019-08-15
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations.
J.Biol.Chem., 295, 2020
2AF1
DownloadVisualize
BU of 2af1 by Molmil
Structure of the DNA coiled-coil formed by d(CGATATATATAT)
Descriptor: 5'-D(*CP*GP*AP*TP*AP*TP*AP*TP*AP*TP*AP*T)-3'
Authors:De Luchi, D, Tereshko, V, Gouyette, C, Subirana, J.A.
Deposit date:2005-07-25
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the DNA Coiled Coil Formed by d(CGATATATATAT)
Chembiochem, 7, 2006
5UN3
DownloadVisualize
BU of 5un3 by Molmil
Tetragonal thermolysin (295 K) in the presence of 50% xylose
Descriptor: CALCIUM ION, CHLORIDE ION, Thermolysin, ...
Authors:Juers, D.
Deposit date:2017-01-30
Release date:2017-02-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.60004437 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
4P7O
DownloadVisualize
BU of 4p7o by Molmil
Structure of Escherichia coli PgaB C-terminal domain, P1 crystal form
Descriptor: Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase
Authors:Little, D.J, Li, G, Ing, C, DiFrancesco, B, Bamford, N.C, Robinson, H, Nitz, M, Pomes, R, Howell, P.L.
Deposit date:2014-03-27
Release date:2014-07-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Modification and periplasmic translocation of the biofilm exopolysaccharide poly-beta-1,6-N-acetyl-D-glucosamine.
Proc.Natl.Acad.Sci.USA, 111, 2014
4DZ1
DownloadVisualize
BU of 4dz1 by Molmil
Crystal structure of DalS, an ATP binding cassette transporter for D-alanine from Salmonella enterica
Descriptor: D-ALANINE, DalS D-Alanine transporter
Authors:Mok, M, Junop, M.
Deposit date:2012-02-29
Release date:2012-03-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of DalS, an ATP-binding Cassette Transporter for D-Alanine, and Its Role in Pathogenesis in Salmonella enterica.
J.Biol.Chem., 287, 2012
195D
DownloadVisualize
BU of 195d by Molmil
X-RAY STRUCTURES OF THE B-DNA DODECAMER D(CGCGTTAACGCG) WITH AN INVERTED CENTRAL TETRANUCLEOTIDE AND ITS NETROPSIN COMPLEX
Descriptor: DNA (5'-D(*CP*GP*CP*GP*TP*TP*AP*AP*CP*GP*CP*G)-3'), NETROPSIN
Authors:Balendiran, K, Rao, S.T, Sekharudu, C.Y, Zon, G, Sundaralingam, M.
Deposit date:1994-10-04
Release date:1995-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray structures of the B-DNA dodecamer d(CGCGTTAACGCG) with an inverted central tetranucleotide and its netropsin complex.
Acta Crystallogr.,Sect.D, 51, 1995

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon