PDB: 45385 resultsInfo pagesStatus searchChemie searchBIRD

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4I2D	Binary complex of mouse TdT with AMPcPP Descriptor: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA nucleotidylexotransferase, MAGNESIUM ION, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-11-21 Release date: 2013-07-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
3KYJ	Crystal structure of the P1 domain of CheA3 in complex with CheY6 from R. sphaeroides Descriptor: CheY6 protein, Putative histidine protein kinase, SODIUM ION Authors: Bell, C.H, Porter, S.L, Armitage, J.P, Stuart, D.I. Deposit date: 2009-12-06 Release date: 2010-02-16 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Using structural information to change the phosphotransfer specificity of a two-component chemotaxis signalling complex Plos Biol., 8, 2010
4HQU	Crystal structure of human PDGF-BB in complex with a modified nucleotide aptamer (SOMAmer SL5) Descriptor: MAGNESIUM ION, Platelet-derived growth factor subunit B, SODIUM ION, ... Authors: Davies, D.R, Edwards, T.E, Janjic, N, Gelinas, A.D, Zhang, C, Jarvis, T.C. Deposit date: 2012-10-26 Release date: 2012-11-21 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Unique motifs and hydrophobic interactions shape the binding of modified DNA ligands to protein targets. Proc.Natl.Acad.Sci.USA, 109, 2012
4I2B	Ternary complex of mouse TdT with ssDNA and AMPcPP Descriptor: 5'-D(P*AP*AP*AP*AP*A)-3', DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA nucleotidylexotransferase, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-11-21 Release date: 2013-07-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I29	Binary complex of mouse TdT with ssDNA and Mn++ Descriptor: 5'-D(*AP*AP*(8BA)P*AP*A)-3', DNA nucleotidylexotransferase, MANGANESE (II) ION, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-11-21 Release date: 2013-07-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
3K9G	CRYSTAL STRUCTURE OF A PLASMID PARTITION PROTEIN FROM BORRELIA BURGDORFERI AT 2.25A RESOLUTION, iodide soak Descriptor: IODIDE ION, PF-32 protein, SODIUM ION Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2009-10-15 Release date: 2009-11-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.25 Å) Cite: SAD phasing using iodide ions in a high-throughput structural genomics environment. J Struct Funct Genomics, 12, 2011
4HRY	The structure of Arabidopsis thaliana KAI2 Descriptor: CHLORIDE ION, GLYCEROL, Hydrolase, ... Authors: Bythell-Douglas, R, Waters, M.T, Scaffidi, A, Flematti, G.R, Smith, S.M, Bond, C.S. Deposit date: 2012-10-29 Release date: 2013-02-27 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The Structure of the Karrikin-Insensitive Protein (KAI2) in Arabidopsis thaliana Plos One, 8, 2013
4HOS	Crystal Structure of Full-Length Human IFIT5 with 5`-triphosphate Oligouridine Descriptor: Interferon-induced protein with tetratricopeptide repeats 5, RNA (5'-R(*(UTP)P*UP*UP*U)-3'), SODIUM ION Authors: Abbas, Y.M, Pichlmair, A, Gorna, M.W, Superti-Furga, G, Nagar, B. Deposit date: 2012-10-22 Release date: 2013-01-23 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for viral 5'-PPP-RNA recognition by human IFIT proteins. Nature, 494, 2013
4HTN	Mitigation of X-ray damage in macromolecular crystallography by submicrometer line focusing; total dose 1.32 x 10e+12 X-ray photons Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ... Authors: Duke, N.E.C, Finfrock, Y.Z, Stern, E.A, Alkire, R.W, Lazarski, K, Joachimiak, A. Deposit date: 2012-11-01 Release date: 2013-05-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Mitigation of X-ray damage in macromolecular crystallography by submicrometre line focusing. Acta Crystallogr.,Sect.D, 69, 2013
3AVP	Pantothenate kinase from Mycobacterium tuberculosis (MtPanK) in complex with Pantothenol Descriptor: (2S)-2,4-dihydroxy-N-(3-hydroxypropyl)-3,3-dimethylbutanamide, CITRATE ANION, GLYCEROL, ... Authors: Chetnani, B, Kumar, P, Abhinav, K.V, Chhibber, M, Surolia, A, Vijayan, M. Deposit date: 2011-03-06 Release date: 2011-08-17 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Location and conformation of pantothenate and its derivatives in Mycobacterium tuberculosis pantothenate kinase: insights into enzyme action Acta Crystallogr.,Sect.D, 67, 2011
4I2A	Binary complex of mouse TdT with ssDNA in absence of divalent transition metal ion Descriptor: 5'-D(*AP*AP*(BRU)P*AP*A)-3', DNA nucleotidylexotransferase, MAGNESIUM ION, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-11-21 Release date: 2013-07-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I2G	Binary complex of mouse TdT with ssDNA Descriptor: 5'-D(P*AP*AP*AP*AP*A)-3', COBALT (II) ION, DNA nucleotidylexotransferase, ... Authors: Gouge, J, Delarue, M. Deposit date: 2012-11-21 Release date: 2013-07-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I3M	Aer2 poly-HAMP domains: L44H HAMP1 CW-lock mutant Descriptor: Aerotaxis transducer Aer2, CHLORIDE ION, MAGNESIUM ION, ... Authors: Airola, M.V, Sukomon, N, Crane, B.R. Deposit date: 2012-11-26 Release date: 2013-02-27 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.95 Å) Cite: HAMP Domain Conformers That Propagate Opposite Signals in Bacterial Chemoreceptors. Plos Biol., 11, 2013
3JTZ	Structure of the arm-type binding domain of HPI integrase Descriptor: Integrase, SODIUM ION Authors: Szwagierczak, A, Antonenka, U, Popowicz, G.M, Sitar, T, Holak, T.A, Rakin, A. Deposit date: 2009-09-14 Release date: 2009-10-06 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structures of the arm-type binding domains of HPI and HAI7 integrases J.Biol.Chem., 284, 2009
4H7O	Crystal structure of Serine acetyltransferase from Vibrio cholerae O1 biovar El Tor N16961 Descriptor: ARGININE, CYSTEINE, SODIUM ION, ... Authors: Tarique, K.F, Abdul Rehman, S.A, Gourinath, S. Deposit date: 2012-09-20 Release date: 2013-10-02 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Crystal structure of Serine acetyltransferase from Vibrio cholerae O1 biovar El Tor N16961. To be Published
4GNP	Structure of rat cytosolic PEPCK Ld_3g in complex with PEP and GDP Descriptor: GUANOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, PHOSPHOENOLPYRUVATE, ... Authors: Johnson, T.A, Holyoak, T. Deposit date: 2012-08-17 Release date: 2013-07-03 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.744 Å) Cite: The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry, 51, 2012
2YA0	Catalytic Module of the Multi-modular glycogen-degrading pneumococcal virulence factor SpuA Descriptor: CALCIUM ION, GLYCEROL, PUTATIVE ALKALINE AMYLOPULLULANASE, ... Authors: Lammerts van Bueren, A, Ficko-Blean, E, Pluvinage, B, Hehemann, J.H, Higgins, M.A, Deng, L, Ogunniyi, A.D, Stroeher, U.H, Warry, N.E, Burke, R.D, Czjzek, M, Paton, J.C, Vocadlo, D.J, Boraston, A.B. Deposit date: 2011-02-17 Release date: 2011-04-20 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.85 Å) Cite: The Conformation and Function of a Multimodular Glycogen-Degrading Pneumococcal Virulence Factor. Structure, 19, 2011
4HE9	Crystal Structure of HIV-1 protease mutants I54M complexed with inhibitor GRL-0519 Descriptor: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, CHLORIDE ION, HIV-1 protease, ... Authors: Shen, C.H, Zhang, H, Weber, I.T. Deposit date: 2012-10-03 Release date: 2013-08-21 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.06 Å) Cite: Novel P2 tris-tetrahydrofuran group in antiviral compound 1 (GRL-0519) fills the S2 binding pocket of selected mutants of HIV-1 protease. J.Med.Chem., 56, 2013
4H3O	Crystal structure of a new form of lectin from Allium sativum at 2.17 A resolution Descriptor: CADMIUM ION, Lectin, SODIUM ION Authors: Kumar, S, Yamini, S, Kumar, J, Kaur, P, Singh, T.P, Dey, S. Deposit date: 2012-09-14 Release date: 2012-09-26 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Crystal structure of a new form of lectin from Allium sativum at 2.17 A resolution To be Published
4GNO	Structure of rat cytosolic PEPCK Ld_3g in complex with Beta-Sulfopyruvate and GTP Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PENTAETHYLENE GLYCOL, ... Authors: Johnson, T.A, Holyoak, T. Deposit date: 2012-08-17 Release date: 2013-07-03 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The {Omega}-loop lid domain of phosphoenolpyruvate carboxykinase is essential for catalytic function. Biochemistry, 51, 2012
2YGJ	Methanobactin MB4 Descriptor: COPPER (II) ION, METHANOBACTIN MB4, SODIUM ION Authors: Ghazouani, A, Basle, A, Firbank, S.J, Gray, J, Dennison, C. Deposit date: 2011-04-18 Release date: 2012-04-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (0.8 Å) Cite: Variations in Methanobactin Structure Influences Copper Utilization by Methane-Oxidizing Bacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
4FKP	Crystal structure of the cdk2 in complex with oxindole inhibitor Descriptor: 3-{[4-([AMINO(IMINO)METHYL]AMINOSULFONYL)ANILINO]METHYLENE}-2-OXO-2,3-DIHYDRO-1H-INDOLE, Cyclin-dependent kinase 2, SODIUM ION Authors: Kang, Y.N, Stuckey, J.A. Deposit date: 2012-06-13 Release date: 2013-05-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of the cdk2 in complex with oxindole inhibitor To be Published
4FLK	Human MetAP1 with bengamide analog Y10, in Mn form Descriptor: (E,2R,3R,4S,5R)-N-(2,3-dihydro-1H-inden-2-yl)-2-methoxy-8,8-dimethyl-3,4,5-tris(oxidanyl)non-6-enamide, MANGANESE (II) ION, Methionine aminopeptidase 1, ... Authors: Ye, Q.Z, Xu, W. Deposit date: 2012-06-14 Release date: 2012-09-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.47 Å) Cite: Structural analysis of bengamide derivatives as inhibitors of methionine aminopeptidases. J.Med.Chem., 55, 2012
2YCW	TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND ANTAGONIST CARAZOLOL Descriptor: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, BETA-1 ADRENERGIC RECEPTOR, HEGA-10, ... Authors: Moukhametzianov, R, Warne, T, Edwards, P.C, Serrano-Vega, M.J, Leslie, A.G.W, Tate, C.G, Schertler, G.F.X. Deposit date: 2011-03-17 Release date: 2011-06-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3 Å) Cite: Two Distinct Conformations of Helix 6 Observed in Antagonist-Bound Structures of a Beta-1- Adrenergic Receptor. Proc.Natl.Acad.Sci.USA, 108, 2011
3K1U	Beta-xylosidase, family 43 glycosyl hydrolase from Clostridium acetobutylicum Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-xylosidase, ... Authors: Osipiuk, J, Wu, R, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2009-09-28 Release date: 2009-10-06 Last modified: 2017-11-01 Method: X-RAY DIFFRACTION (1.55 Å) Cite: X-ray crystal structure of beta-xylosidase, family 43 glycosyl hydrolase from Clostridium acetobutylicum at 1.55 A resolution To be Published

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